RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 IGKV1D-42A0A075B6H8 117 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 IGHV2OR16-5A0A0B4J2B6 119 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 TGFAP01135 160 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 GRPP07492 148 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 RFESDQ8TAC1 157 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 ASAH2BP0C7U1 165 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 ROM1Q03395 351 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 TMEM187Q14656 261 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 LHFPL2Q6ZUX7 228 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
PRKN-206ENST00000366898 MRPL13Q9BYD1 178 aaKnown RBP10.05□□□□□ -0.8
PRKN-206ENST00000366898 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
PRKN-206ENST00000366898 ATP5G3P48201 142 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 UNC119Q13432 240 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 LINC01590Q5TEZ4 76 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 STPG1Q5TH74 334 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 STXBP6Q8NFX7 210 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 B4GALT7Q9UBV7 327 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 hDV102S1A0JD36 115 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 NAPSAO96009 420 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 HBZP02008 142 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CT45A6P0DMU7 189 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CT45A5P0DMU8 189 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CT45A7P0DMV0 189 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CD46P15529 392 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 ZNF83P51522 516 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CT45A1Q5HYN5 189 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 AAED1Q7RTV5 226 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 CT45A3Q8NHU0 189 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 GATAD1Q8WUU5 269 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 GNB4Q9HAV0 340 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 OBP2BQ9NPH6 170 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 COX7A2P2O60397 106 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 VENTXO95231 258 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CEACAM6P40199 344 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 HSD52Q0P140 79 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 BHLHA15Q7RTS1 189 aaPredicted RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 MBD3L1Q8WWY6 194 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 MCRIP2Q9BUT9 160 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 GPR35Q9HC97 309 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CHD9Q3L8U1 2897 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 CUL9Q8IWT3 2517 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 PRR32B1ATL7 298 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 E9PQ18 207 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 IGLC3P0DOY3 106 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 NXPH1P58417 271 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 UBE2NP61088 152 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 RPL31P62899 125 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 SSPNQ14714 243 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 BOD1L2Q8IYS8 172 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 PRDM6Q9NQX0 595 aa10.04□□□□□ -0.8
PRKN-206ENST00000366898 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 LSM4Q9Y4Z0 139 aaKnown RBP10.04□□□□□ -0.8
PRKN-206ENST00000366898 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 KBTBD11-OT1A0A1B0GTJ5 212 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 CRYBB3P26998 211 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 CCL7P80098 99 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 EGR4Q05215 589 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 VSTM5A8MXK1 200 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 K7EP13 123 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 DHRS3O75911 302 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 LYPD3O95274 346 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 MT-CO3P00414 261 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 NOTCH3Q9UM47 2321 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 ZNF732B4DXR9 585 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 CXorf1O96002 111 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 IGHV3-13P01766 116 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 IGHV3-7P01780 117 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 AMY1AP04745 511 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 SPINK8P0C7L1 97 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 TMEM144Q7Z5S9 345 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 VSIRQ9H7M9 311 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 ST20Q9HBF5 79 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 SH2D2AQ9NP31 389 aa10.03□□□□□ -0.8
PRKN-206ENST00000366898 FANCMQ8IYD8 2048 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 ALG1L2C9J202 215 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 COL8A1P27658 744 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 PLAURQ03405 335 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 DMWDQ09019 674 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 SLAQ13239 276 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 ANKRD37Q7Z713 158 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 ZNF721Q8TF20 911 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 SPSB1Q96BD6 273 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 IL36BQ9NZH7 164 aa10.02□□□□□ -0.8
PRKN-206ENST00000366898 DEFB108AA8MXU0 73 aa10.02□□□□□ -0.81
PRKN-206ENST00000366898 LAMTOR5O43504 91 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms