RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MFNGO00587 321 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 TRBV12-3P01733 135 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 GSTT2P0CG29 244 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 GSTT2BP0CG30 244 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 TALDO1P37837 337 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 LINC00205P59089 165 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 CBX3Q13185 183 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 ARFRP1Q13795 201 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 FXYD3Q14802 87 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 RPEL1Q2QD12 228 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 C22orf42Q6IC83 251 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 LAX1Q8IWV1 398 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 OR2D2Q9H210 308 aa11.91□□□□□ -0.5
DDX55-202ENST00000354291 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
DDX55-202ENST00000354291 DNAH6Q9C0G6 4158 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 DYNC1H1Q14204 4646 aaKnown RBP11.9□□□□□ -0.5
DDX55-202ENST00000354291 RRASP10301 218 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 DEFA5Q01523 94 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 Q6ZS49 121 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 LYG2Q86SG7 212 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 POC5Q8NA72 575 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 GRPEL2Q8TAA5 225 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 GINS4Q9BRT9 223 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 SDHAF2Q9NX18 166 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
DDX55-202ENST00000354291 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
DDX55-202ENST00000354291 NDUFB8O95169 186 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 FGF9P31371 208 aaPredicted RBP11.89□□□□□ -0.51
DDX55-202ENST00000354291 PRR20EP86478 221 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 PRR20CP86479 221 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 PRR20DP86480 221 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 PRR20BP86481 221 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 PRR20AP86496 221 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 RTL8BQ17RB0 113 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 DYNLRB2Q8TF09 96 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 PHLDA1Q8WV24 401 aaPredicted RBP11.89□□□□□ -0.51
DDX55-202ENST00000354291 MAFIPQ8WZ33 124 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 GGTLC1Q9BX51 225 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 YTHDF1Q9BYJ9 559 aaKnown RBP11.89□□□□□ -0.51
DDX55-202ENST00000354291 ATG5Q9H1Y0 275 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 Q9H521 79 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 FAT2Q9NYQ8 4349 aa11.89□□□□□ -0.51
DDX55-202ENST00000354291 DNAH2Q9P225 4427 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 A0A0B4J203 849 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 NOTOA8MTQ0 251 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 H3BUA1 57 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 OR2A4O95047 310 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 DTYMKP23919 212 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 TPRA1Q86W33 373 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 NR2C2APQ86WQ0 139 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 SPARTQ8N0X7 666 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
DDX55-202ENST00000354291 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
DDX55-202ENST00000354291 SHOXO15266 292 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 AIREO43918 545 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 SCGNO76038 276 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 ATP6V1G2O95670 118 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 CRYGBP07316 175 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 CTXN2P0C2S0 81 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 PSMB9P28065 219 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 DEFB114Q30KQ6 69 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 H1FOOQ8IZA3 346 aaPredicted RBP11.87□□□□□ -0.51
DDX55-202ENST00000354291 BVESQ8NE79 360 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 KRTAP4-5Q9BYR2 181 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
DDX55-202ENST00000354291 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
DDX55-202ENST00000354291 AADACP22760 399 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 HACD4Q5VWC8 232 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 ZNF343Q6P1L6 599 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 SLC16A13Q7RTY0 426 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 SNAPC3Q92966 411 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 WDR89Q96FK6 387 aaPredicted RBP11.86□□□□□ -0.51
DDX55-202ENST00000354291 DCSTAMPQ9H295 470 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
DDX55-202ENST00000354291 DNAH17Q9UFH2 4485 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 SMIM30A4D0T7 59 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 SRRM4A7MD48 611 aaKnown RBP11.85□□□□□ -0.51
DDX55-202ENST00000354291 DUTP33316 252 aaKnown RBP11.85□□□□□ -0.51
DDX55-202ENST00000354291 BMI1P35226 326 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 SSBP2P81877 361 aaPredicted RBP11.85□□□□□ -0.51
DDX55-202ENST00000354291 VMA21Q3ZAQ7 101 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 TEX45Q8NA69 505 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 C5orf30Q96GV9 206 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 ELF5Q9UKW6 265 aaPredicted RBP11.85□□□□□ -0.51
DDX55-202ENST00000354291 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
DDX55-202ENST00000354291 IGKV1D-8A0A087WSZ0 117 aa11.84□□□□□ -0.51
DDX55-202ENST00000354291 SPRY2O43597 315 aa11.84□□□□□ -0.51
DDX55-202ENST00000354291 SLC22A5O76082 557 aa11.84□□□□□ -0.51
DDX55-202ENST00000354291 UBE2KP61086 200 aa11.84□□□□□ -0.51
DDX55-202ENST00000354291 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
DDX55-202ENST00000354291 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms