RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 ASPHD1Q5U4P2 390 aa11.28□□□□□ -0.6
VHL-201ENST00000256474 TMEM178AQ8NBL3 297 aa11.28□□□□□ -0.6
VHL-201ENST00000256474 MRPS18CQ9Y3D5 142 aaKnown RBP11.28□□□□□ -0.6
VHL-201ENST00000256474 M0R1B8 84 aa11.28□□□□□ -0.6
VHL-201ENST00000256474 RRHO14718 337 aa11.28□□□□□ -0.6
VHL-201ENST00000256474 UTF1Q5T230 341 aa11.28□□□□□ -0.6
VHL-201ENST00000256474 FDCSPQ8NFU4 85 aa11.28□□□□□ -0.6
VHL-201ENST00000256474 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.6
VHL-201ENST00000256474 IGHV3-48P01763 117 aa11.27□□□□□ -0.6
VHL-201ENST00000256474 CD1BP29016 333 aa11.27□□□□□ -0.6
VHL-201ENST00000256474 RAB4BP61018 213 aa11.27□□□□□ -0.6
VHL-201ENST00000256474 IMMP2LQ96T52 175 aa11.27□□□□□ -0.6
VHL-201ENST00000256474 PCSK5Q92824 1860 aa11.27□□□□□ -0.6
VHL-201ENST00000256474 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 CECR9P0C854 216 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
VHL-201ENST00000256474 GNB2P62879 340 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 ACOT6Q3I5F7 207 aaPredicted RBP11.27□□□□□ -0.61
VHL-201ENST00000256474 PRR31Q5SQ13 230 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 TMEM14EPQ6UXP3 125 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 MOGAT3Q86VF5 341 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 OR1P1Q8NH06 330 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 PRDM13Q9H4Q3 707 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 PITPNC1Q9UKF7 332 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 AMBPP02760 352 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 DDTP30046 118 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 GUCD1Q96NT3 240 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 ZNRD1Q9P1U0 126 aa11.27□□□□□ -0.61
VHL-201ENST00000256474 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 PRDX2P32119 198 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 WDR82Q6UXN9 313 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 ACP7Q6ZNF0 438 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 FAM214BQ7L5A3 538 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 SLC17A3O00476 420 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 GATA2P23769 480 aaPredicted RBP11.26□□□□□ -0.61
VHL-201ENST00000256474 SMIM21Q3B7S5 101 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 ZNF718Q3SXZ3 478 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 C9orf106Q8NAJ2 232 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 TRAV1-1A0A0B4J248 108 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 BRWD1-AS2P59051 145 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 ZNF146Q15072 292 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 SRSF7Q16629 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
VHL-201ENST00000256474 RND1Q92730 232 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 CACNA1BQ00975 2339 aa11.26□□□□□ -0.61
VHL-201ENST00000256474 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
VHL-201ENST00000256474 SPAARA0A1B0GVQ0 90 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 C21orf140B9A014 251 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 TCL1AP56279 114 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 SSX2Q16385 188 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 SPRNQ5BIV9 151 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 DDA1Q9BW61 102 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 GABRA6Q16445 453 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 DEFB109BQ30KR1 87 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 KCNIP4Q6PIL6 250 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 S1PR3Q99500 378 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 P2RX4Q99571 388 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 MBNL3Q9NUK0 354 aaKnown RBP11.25□□□□□ -0.61
VHL-201ENST00000256474 PIGBOS1A0A0B4J2F0 54 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 F6UZH7 168 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 CLDN14O95500 239 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 HRASP01112 189 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 TDGF1P13385 188 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 KITLGP21583 273 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 NPPCP23582 126 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 ERVK11-1P61568 191 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 SPATA31B1PQ5VZV4 182 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 CD177Q8N6Q3 437 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 GMPPAQ96IJ6 420 aaPredicted RBP11.25□□□□□ -0.61
VHL-201ENST00000256474 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 SRD5A3Q9H8P0 318 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 TP53TG5Q9Y2B4 290 aa11.25□□□□□ -0.61
VHL-201ENST00000256474 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
VHL-201ENST00000256474 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
VHL-201ENST00000256474 MS4A5Q9H3V2 200 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 SERTAD4Q9NUC0 356 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 TRBV6-6A0A0A6YYG2 114 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 SLC31A2O15432 143 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 CD59P13987 128 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 HOXA6P31267 233 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 GNB1P62873 340 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 ZNF600Q6ZNG1 722 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 FAM216AQ8WUB2 273 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
VHL-201ENST00000256474 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms