RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 HSPE1P61604 102 aaKnown RBP15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 MUC21Q5SSG8 566 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 TFF1P04155 84 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 MEF2BQ02080 365 aaPredicted RBP15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 C19orf54Q5BKX5 351 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 SFXN3Q9BWM7 321 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 SSBP3Q9BWW4 388 aaPredicted RBP15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 ASPHD2Q6ICH7 369 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 FAM53AQ6NSI3 398 aaPredicted RBP15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 TMEM54Q969K7 222 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 CLEC7AQ9BXN2 247 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 KIF13BQ9NQT8 1826 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 RRHO14718 337 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 TCF19Q9Y242 345 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 CACNA1GO43497 2377 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 REPIN1Q9BWE0 567 aaKnown RBP15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 DNAJC4Q9NNZ3 241 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 PCSK4Q6UW60 755 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 FAM216BQ8N7L0 139 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 ZNF703Q9H7S9 590 aaPredicted RBP15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 MBNL2Q5VZF2 373 aaKnown RBP15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 OR5P3Q8WZ94 311 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 PITPNC1Q9UKF7 332 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 A0A1W2PS18 150 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 AMY1AP04745 511 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 NMBP08949 121 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 CECR9P0C854 216 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 FAM181AQ8N9Y4 354 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 OR9G1Q8NH87 305 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 AKAP6Q13023 2319 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 MESP1Q9BRJ9 268 aa15.91■□□□□ 0.14
SMARCC1-201ENST00000254480 ESPL1Q14674 2120 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 GPX1P07203 203 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 OR11H4Q8NGC9 324 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 NUDT3O95989 172 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 LIPFP07098 398 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 ANOS1P23352 680 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 LTBRP36941 435 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 KLRB1Q12918 225 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 PRSS8Q16651 343 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 VWCEQ96DN2 955 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 DPH3Q96FX2 82 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 RIPPLY2Q5TAB7 128 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 IL4P05112 153 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 PRB4P10163 310 aaPredicted RBP15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 BSPH1Q075Z2 132 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 GOLT1AQ6ZVE7 132 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 OR4C13Q8NGP0 309 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 SCARF2Q96GP6 870 aaPredicted RBP15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 TET1Q8NFU7 2136 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 A0A1W2PRX2 142 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 HERPUD1Q15011 391 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 COX19Q49B96 90 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 Q6ZT83 130 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 PUSL1Q8N0Z8 303 aaKnown RBP15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 OR51M1Q9H341 326 aa15.9■□□□□ 0.14
SMARCC1-201ENST00000254480 ARHGEF17Q96PE2 2063 aaPredicted RBP15.89■□□□□ 0.14
SMARCC1-201ENST00000254480 FOXI3A8MTJ6 420 aaPredicted RBP15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 PDLIM4P50479 330 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 LYRM7Q5U5X0 104 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 ZCCHC24Q8N2G6 241 aaKnown RBP15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 FBXL15Q9H469 300 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 CA2P00918 260 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 FAM106AQ4KMX7 169 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 LAIR2Q6ISS4 152 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 ATOH7Q8N100 152 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 JPT1Q9UK76 154 aa15.89■□□□□ 0.13
SMARCC1-201ENST00000254480 CEP250Q9BV73 2442 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 C9JCJ5 164 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 CDKN1AP38936 164 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 HIST1H1AQ02539 215 aaPredicted RBP15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 TMEM187Q14656 261 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 SHISA3A0PJX4 238 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 MRPL18Q9H0U6 180 aaKnown RBP15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 ZFP30Q9Y2G7 519 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 RGPD3A6NKT7 1758 aaPredicted RBP15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 CD99P14209 185 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 RND3P61587 244 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 IGLV3-21P80748 117 aaPredicted RBP15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 SYT8Q8NBV8 401 aa15.88■□□□□ 0.13
SMARCC1-201ENST00000254480 GRIFINA4D1Z8 144 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 NDUFA2O43678 99 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 PF4P02776 101 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 PTGDSP41222 190 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 HINT1P49773 126 aaPredicted RBP15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 SELENOTP62341 195 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 RELQ04864 619 aaPredicted RBP15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 LSM10Q969L4 123 aaKnown RBP15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 AICDAQ9GZX7 198 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 F11RQ9Y624 299 aaKnown RBP15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 RAB37Q96AX2 223 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 NABP2Q9BQ15 211 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 SDK2Q58EX2 2172 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 C8orf88P0DMB2 117 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 ZNF56Q15929 161 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 CD200R1LQ6Q8B3 271 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 STPG3Q8N7X2 389 aa15.87■□□□□ 0.13
SMARCC1-201ENST00000254480 TMEM106BQ9NUM4 274 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms