RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W RPS17AP02407 136 aaKnown RBP5.8□□□□□ -1.48
VPS28YPL065W KAR1P11927 433 aa5.8□□□□□ -1.48
VPS28YPL065W RPS17BP14127 136 aaKnown RBP5.8□□□□□ -1.48
VPS28YPL065W VID28P40547 921 aa5.8□□□□□ -1.48
VPS28YPL065W ECM38Q05902 660 aaPredicted RBP5.8□□□□□ -1.48
VPS28YPL065W VHS3Q08438 674 aa5.8□□□□□ -1.48
VPS28YPL065W SLX4Q12098 748 aa5.8□□□□□ -1.48
VPS28YPL065W CDC26P14724 124 aa5.79□□□□□ -1.48
VPS28YPL065W BCS1P32839 456 aa5.79□□□□□ -1.48
VPS28YPL065W RSC8P43609 557 aaKnown RBP5.79□□□□□ -1.48
VPS28YPL065W RNR4P49723 345 aaKnown RBP5.79□□□□□ -1.48
VPS28YPL065W YGR151CP53287 111 aa5.79□□□□□ -1.48
VPS28YPL065W RCR2Q03446 210 aaKnown RBP5.79□□□□□ -1.48
VPS28YPL065W PHM6Q05637 104 aa5.79□□□□□ -1.48
VPS28YPL065W RGC1Q06108 1083 aaKnown RBP5.79□□□□□ -1.48
VPS28YPL065W THI22Q06490 572 aa5.79□□□□□ -1.48
VPS28YPL065W VPS36Q06696 566 aa5.79□□□□□ -1.48
VPS28YPL065W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
VPS28YPL065W ECM3Q99252 613 aa5.79□□□□□ -1.48
VPS28YPL065W SET3P36124 751 aa5.78□□□□□ -1.48
VPS28YPL065W DUN1P39009 513 aa5.78□□□□□ -1.48
VPS28YPL065W SLD3P53135 668 aa5.78□□□□□ -1.48
VPS28YPL065W RTS3P53289 263 aa5.78□□□□□ -1.48
VPS28YPL065W SPC98P53540 846 aa5.78□□□□□ -1.48
VPS28YPL065W SEG1Q04279 960 aa5.78□□□□□ -1.48
VPS28YPL065W STP4Q07351 490 aa5.78□□□□□ -1.48
VPS28YPL065W YAP7Q08182 245 aa5.78□□□□□ -1.48
VPS28YPL065W BMS1Q08965 1183 aaKnown RBP5.78□□□□□ -1.48
VPS28YPL065W FRS1P15624 595 aaKnown RBP5.77□□□□□ -1.49
VPS28YPL065W RPA135P22138 1203 aaKnown RBP5.77□□□□□ -1.49
VPS28YPL065W PET127P32606 800 aa5.77□□□□□ -1.49
VPS28YPL065W PEA2P40091 420 aa5.77□□□□□ -1.49
VPS28YPL065W GLO1P50107 326 aa5.77□□□□□ -1.49
VPS28YPL065W SEC5P89102 971 aa5.77□□□□□ -1.49
VPS28YPL065W CHS5Q12114 671 aaKnown RBP5.77□□□□□ -1.49
VPS28YPL065W IME1P21190 360 aa5.76□□□□□ -1.49
VPS28YPL065W IES1P43579 692 aa5.76□□□□□ -1.49
VPS28YPL065W YDL086WQ07505 273 aa5.76□□□□□ -1.49
VPS28YPL065W NGL1Q08213 363 aaKnown RBP5.76□□□□□ -1.49
VPS28YPL065W PEX15Q08215 383 aa5.76□□□□□ -1.49
VPS28YPL065W YOR378WQ08902 515 aa5.76□□□□□ -1.49
VPS28YPL065W NTH1P32356 751 aa5.75□□□□□ -1.49
VPS28YPL065W HXT4P32467 576 aa5.75□□□□□ -1.49
VPS28YPL065W TMT1P32643 299 aa5.75□□□□□ -1.49
VPS28YPL065W SEC6P32844 805 aa5.75□□□□□ -1.49
VPS28YPL065W EMP65P40085 556 aa5.75□□□□□ -1.49
VPS28YPL065W RIM13Q03792 727 aa5.75□□□□□ -1.49
VPS28YPL065W SST2P11972 698 aaKnown RBP5.74□□□□□ -1.49
VPS28YPL065W SEC15P22224 910 aa5.74□□□□□ -1.49
VPS28YPL065W YPT7P32939 208 aa5.74□□□□□ -1.49
VPS28YPL065W APL3P38065 1025 aa5.74□□□□□ -1.49
VPS28YPL065W KSP1P38691 1029 aaKnown RBP5.74□□□□□ -1.49
VPS28YPL065W BUD8P41698 603 aa5.74□□□□□ -1.49
VPS28YPL065W OSW1Q08692 278 aa5.74□□□□□ -1.49
VPS28YPL065W ERG20P08524 352 aaKnown RBP5.73□□□□□ -1.49
VPS28YPL065W DGR2P32330 852 aa5.73□□□□□ -1.49
VPS28YPL065W CTP1P38152 299 aa5.73□□□□□ -1.49
VPS28YPL065W TPM2P40414 161 aa5.73□□□□□ -1.49
VPS28YPL065W BIT61P47041 543 aa5.73□□□□□ -1.49
VPS28YPL065W YSH1Q06224 779 aaPredicted RBP5.73□□□□□ -1.49
VPS28YPL065W CWC2Q12046 339 aaPredicted RBP5.73□□□□□ -1.49
VPS28YPL065W NYV1Q12255 253 aa5.73□□□□□ -1.49
VPS28YPL065W SAT4P25333 603 aaKnown RBP5.72□□□□□ -1.49
VPS28YPL065W FEN2P25621 512 aaKnown RBP5.72□□□□□ -1.49
VPS28YPL065W MF(ALPHA)2P32435 120 aa5.72□□□□□ -1.49
VPS28YPL065W NIC96P34077 839 aa5.72□□□□□ -1.49
VPS28YPL065W EAF5P39995 279 aa5.72□□□□□ -1.49
VPS28YPL065W NOP2P40991 618 aaKnown RBP5.72□□□□□ -1.49
VPS28YPL065W MPS3P47069 682 aa5.72□□□□□ -1.49
VPS28YPL065W VBA4Q04602 768 aaKnown RBP5.72□□□□□ -1.49
VPS28YPL065W POM34Q12445 299 aa5.72□□□□□ -1.49
VPS28YPL065W ADE5,7P07244 802 aaKnown RBP5.71□□□□□ -1.5
VPS28YPL065W STE12P13574 688 aa5.71□□□□□ -1.5
VPS28YPL065W UGP1P32861 499 aaKnown RBP5.71□□□□□ -1.5
VPS28YPL065W YMC2P38087 329 aa5.71□□□□□ -1.5
VPS28YPL065W LTP1P40347 161 aa5.71□□□□□ -1.5
VPS28YPL065W PXA1P41909 870 aa5.71□□□□□ -1.5
VPS28YPL065W TAF4P50105 388 aa5.71□□□□□ -1.5
VPS28YPL065W MET14Q02196 202 aa5.71□□□□□ -1.5
VPS28YPL065W FMP30Q02883 468 aa5.71□□□□□ -1.5
VPS28YPL065W GAL1P04385 528 aa5.7□□□□□ -1.5
VPS28YPL065W ATP4P05626 244 aa5.7□□□□□ -1.5
VPS28YPL065W YEF3P16521 1044 aaKnown RBP5.7□□□□□ -1.5
VPS28YPL065W ACO1P19414 778 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
VPS28YPL065W YHR033WP38690 423 aa5.7□□□□□ -1.5
VPS28YPL065W KHA1P40309 873 aa5.7□□□□□ -1.5
VPS28YPL065W IRC5P43610 853 aa5.7□□□□□ -1.5
VPS28YPL065W RPS9BP05755 195 aaKnown RBP5.69□□□□□ -1.5
VPS28YPL065W YEL076C-AP0CX16 216 aa5.69□□□□□ -1.5
VPS28YPL065W YLR464WP0CX17 216 aa5.69□□□□□ -1.5
VPS28YPL065W ERG11P10614 530 aa5.69□□□□□ -1.5
VPS28YPL065W PTP1P25044 335 aa5.69□□□□□ -1.5
VPS28YPL065W KIN82P25341 720 aa5.69□□□□□ -1.5
VPS28YPL065W SRP68P38687 599 aaKnown RBP5.69□□□□□ -1.5
VPS28YPL065W YHR097CP38809 366 aaKnown RBP5.69□□□□□ -1.5
VPS28YPL065W PMC1P38929 1173 aaPredicted RBP5.69□□□□□ -1.5
VPS28YPL065W YEL076CP39971 216 aa5.69□□□□□ -1.5
VPS28YPL065W NMA2P53204 395 aa5.69□□□□□ -1.5
VPS28YPL065W HOL1P53389 586 aa5.69□□□□□ -1.5
VPS28YPL065W MDM20Q12387 796 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 171 ms