RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeastyeast

Gene TPM1, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM1YNL079C COX18P53239 316 aa4.35□□□□□ -1.71
TPM1YNL079C RIA1P53893 1110 aa4.35□□□□□ -1.71
TPM1YNL079C PTA1Q01329 785 aaPredicted RBP4.35□□□□□ -1.71
TPM1YNL079C YMR210WQ03649 449 aa4.35□□□□□ -1.71
TPM1YNL079C VHS3Q08438 674 aa4.35□□□□□ -1.71
TPM1YNL079C IRC13Q08630 104 aa4.35□□□□□ -1.71
TPM1YNL079C PUS9Q12069 462 aa4.35□□□□□ -1.71
TPM1YNL079C AEP2P22136 580 aa4.34□□□□□ -1.71
TPM1YNL079C PET127P32606 800 aa4.34□□□□□ -1.71
TPM1YNL079C YPT7P32939 208 aa4.34□□□□□ -1.71
TPM1YNL079C FAT1P38225 669 aa4.34□□□□□ -1.71
TPM1YNL079C BCD1P38772 366 aa4.34□□□□□ -1.71
TPM1YNL079C NOP2P40991 618 aaKnown RBP4.34□□□□□ -1.71
TPM1YNL079C RSC8P43609 557 aaKnown RBP4.34□□□□□ -1.71
TPM1YNL079C NIT2P47016 307 aa4.34□□□□□ -1.71
TPM1YNL079C UBC11P52492 156 aa4.34□□□□□ -1.71
TPM1YNL079C NOP15P53927 220 aaPredicted RBP4.34□□□□□ -1.71
TPM1YNL079C COG6P53959 839 aa4.34□□□□□ -1.71
TPM1YNL079C YPS7Q06325 596 aa4.34□□□□□ -1.71
TPM1YNL079C RMP1Q12530 201 aa4.34□□□□□ -1.71
TPM1YNL079C ECM3Q99252 613 aa4.34□□□□□ -1.71
TPM1YNL079C YML133CQ03099 1374 aa4.34□□□□□ -1.71
TPM1YNL079C YLL067CQ07888 1374 aa4.34□□□□□ -1.71
TPM1YNL079C YLL066CQ99208 1374 aa4.34□□□□□ -1.71
TPM1YNL079C PSK1P31374 1356 aa4.33□□□□□ -1.72
TPM1YNL079C FRS1P15624 595 aaKnown RBP4.33□□□□□ -1.72
TPM1YNL079C PEX1P24004 1043 aa4.33□□□□□ -1.72
TPM1YNL079C FMO1P38866 432 aa4.33□□□□□ -1.72
TPM1YNL079C CCT3P39077 534 aaKnown RBP4.33□□□□□ -1.72
TPM1YNL079C NUP60P39705 539 aa4.33□□□□□ -1.72
TPM1YNL079C GSF2Q04697 403 aaKnown RBP4.33□□□□□ -1.72
TPM1YNL079C RGC1Q06108 1083 aaKnown RBP4.33□□□□□ -1.72
TPM1YNL079C VPS36Q06696 566 aa4.33□□□□□ -1.72
TPM1YNL079C SGO1Q08490 590 aa4.33□□□□□ -1.72
TPM1YNL079C RPS17AP02407 136 aaKnown RBP4.32□□□□□ -1.72
TPM1YNL079C GLN4P13188 809 aaKnown RBP4.32□□□□□ -1.72
TPM1YNL079C RPS17BP14127 136 aaKnown RBP4.32□□□□□ -1.72
TPM1YNL079C IME1P21190 360 aa4.32□□□□□ -1.72
TPM1YNL079C HIS7P33734 552 aaKnown RBP4.32□□□□□ -1.72
TPM1YNL079C PPS1P38148 807 aa4.32□□□□□ -1.72
TPM1YNL079C CHS7P38843 316 aa4.32□□□□□ -1.72
TPM1YNL079C RCR2Q03446 210 aaKnown RBP4.32□□□□□ -1.72
TPM1YNL079C SKY1Q03656 742 aa4.32□□□□□ -1.72
TPM1YNL079C STP4Q07351 490 aa4.32□□□□□ -1.72
TPM1YNL079C DIA2Q08496 732 aaPredicted RBP4.32□□□□□ -1.72
TPM1YNL079C ERG20P08524 352 aaKnown RBP4.31□□□□□ -1.72
TPM1YNL079C CDC26P14724 124 aa4.31□□□□□ -1.72
TPM1YNL079C YEF3P16521 1044 aaKnown RBP4.31□□□□□ -1.72
TPM1YNL079C MVD1P32377 396 aaKnown RBP4.31□□□□□ -1.72
TPM1YNL079C PLC1P32383 869 aa4.31□□□□□ -1.72
TPM1YNL079C HIR1P32479 840 aa4.31□□□□□ -1.72
TPM1YNL079C SER1P33330 395 aaKnown RBP4.31□□□□□ -1.72
TPM1YNL079C REV7P38927 245 aa4.31□□□□□ -1.72
TPM1YNL079C FMP52P40008 231 aa4.31□□□□□ -1.72
TPM1YNL079C IES1P43579 692 aa4.31□□□□□ -1.72
TPM1YNL079C IOC4Q04213 475 aa4.31□□□□□ -1.72
TPM1YNL079C THI22Q06490 572 aa4.31□□□□□ -1.72
TPM1YNL079C TY1B-NL2Q99337 1749 aaKnown RBP4.31□□□□□ -1.72
TPM1YNL079C SIR3P06701 978 aa4.3□□□□□ -1.72
TPM1YNL079C SEC6P32844 805 aa4.3□□□□□ -1.72
TPM1YNL079C BIT2P38346 545 aa4.3□□□□□ -1.72
TPM1YNL079C DUN1P39009 513 aa4.3□□□□□ -1.72
TPM1YNL079C VID28P40547 921 aa4.3□□□□□ -1.72
TPM1YNL079C BIT61P47041 543 aa4.3□□□□□ -1.72
TPM1YNL079C PAN2P53010 1115 aaPredicted RBP4.3□□□□□ -1.72
TPM1YNL079C SLI1P53304 468 aa4.3□□□□□ -1.72
TPM1YNL079C VBA4Q04602 768 aaKnown RBP4.3□□□□□ -1.72
TPM1YNL079C YPR027CQ12079 277 aa4.3□□□□□ -1.72
TPM1YNL079C POM34Q12445 299 aa4.3□□□□□ -1.72
TPM1YNL079C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
TPM1YNL079C YKL033W-AQ86ZR7 236 aa4.3□□□□□ -1.72
TPM1YNL079C MLP1Q02455 1875 aaKnown RBP4.3□□□□□ -1.72
TPM1YNL079C LEU2P04173 364 aaPredicted RBP4.29□□□□□ -1.72
TPM1YNL079C RPP0P05317 312 aaKnown RBP4.29□□□□□ -1.72
TPM1YNL079C ATP12P22135 325 aa4.29□□□□□ -1.72
TPM1YNL079C HEM12P32347 362 aaPredicted RBP4.29□□□□□ -1.72
TPM1YNL079C BCS1P32839 456 aa4.29□□□□□ -1.72
TPM1YNL079C SFB3P38810 929 aa4.29□□□□□ -1.72
TPM1YNL079C HRB1P38922 454 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
TPM1YNL079C BUD8P41698 603 aa4.29□□□□□ -1.72
TPM1YNL079C PXA1P41909 870 aa4.29□□□□□ -1.72
TPM1YNL079C RNR4P49723 345 aaKnown RBP4.29□□□□□ -1.72
TPM1YNL079C PEX14P53112 341 aa4.29□□□□□ -1.72
TPM1YNL079C SPC105P53148 917 aa4.29□□□□□ -1.72
TPM1YNL079C CTF4Q01454 927 aa4.29□□□□□ -1.72
TPM1YNL079C YMR206WQ03695 313 aa4.29□□□□□ -1.72
TPM1YNL079C COX11P19516 300 aaKnown RBP4.28□□□□□ -1.72
TPM1YNL079C KIN82P25341 720 aa4.28□□□□□ -1.72
TPM1YNL079C MF(ALPHA)2P32435 120 aa4.28□□□□□ -1.72
TPM1YNL079C TFC4P33339 1025 aa4.28□□□□□ -1.72
TPM1YNL079C VPS27P40343 622 aaKnown RBP4.28□□□□□ -1.72
TPM1YNL079C DAS1P47005 663 aa4.28□□□□□ -1.72
TPM1YNL079C TEL2P53038 688 aa4.28□□□□□ -1.72
TPM1YNL079C SLD3P53135 668 aa4.28□□□□□ -1.72
TPM1YNL079C FHN1P53279 174 aa4.28□□□□□ -1.72
TPM1YNL079C YAP1802P53309 568 aa4.28□□□□□ -1.72
TPM1YNL079C MUK1Q02866 612 aa4.28□□□□□ -1.72
TPM1YNL079C TAP42Q04372 366 aa4.28□□□□□ -1.72
TPM1YNL079C OMS1Q06668 471 aa4.28□□□□□ -1.72
TPM1YNL079C ZRT2Q12436 422 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms