RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	MSR1	P38714	643 aa		12.35	□□□□□ -0.43
CUE1	YMR264W	ERP2	P39704	215 aa		12.35	□□□□□ -0.43
CUE1	YMR264W	ALD5	P40047	520 aa	Known RBP	12.35	□□□□□ -0.43
CUE1	YMR264W	MRX1	P40050	688 aa		12.35	□□□□□ -0.43
CUE1	YMR264W	MSH6	Q03834	1242 aa		12.35	□□□□□ -0.43
CUE1	YMR264W	RKM2	Q03942	479 aa		12.35	□□□□□ -0.43
CUE1	YMR264W	YPL225W	Q08971	146 aa	Known RBP	12.35	□□□□□ -0.43
CUE1	YMR264W	KDX1	P36005	433 aa		12.34	□□□□□ -0.43
CUE1	YMR264W	KTR5	P53966	522 aa	Predicted RBP	12.34	□□□□□ -0.43
CUE1	YMR264W	TIF35	Q04067	274 aa	Known RBP	12.34	□□□□□ -0.43
CUE1	YMR264W	VPS3	P23643	1011 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	RSA4	P25382	515 aa	Known RBP	12.33	□□□□□ -0.44
CUE1	YMR264W	CYS3	P31373	394 aa	Known RBP	12.33	□□□□□ -0.44
CUE1	YMR264W	LYS9	P38999	446 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	AVT2	P39981	480 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	GCV2	P49095	1034 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	ALT2	P52892	507 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	YGR283C	P53336	341 aa	Predicted RBP	12.33	□□□□□ -0.44
CUE1	YMR264W	FMP25	Q08023	583 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	THI21	Q08975	551 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	YOR022C	Q12204	715 aa		12.33	□□□□□ -0.44
CUE1	YMR264W	YPK1	P12688	680 aa	Known RBP	12.32	□□□□□ -0.44
CUE1	YMR264W	PRP16	P15938	1071 aa	Predicted RBP	12.32	□□□□□ -0.44
CUE1	YMR264W	YCR015C	P25616	317 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	APN2	P38207	520 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	SPC97	P38863	823 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	AFG3	P39925	761 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	SCC4	P40090	624 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	TDA10	P42938	290 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	PFD1	P46988	109 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	YML119W	Q03208	357 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	VHS3	Q08438	674 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	MAM3	Q12296	706 aa		12.32	□□□□□ -0.44
CUE1	YMR264W	GAC1	P28006	793 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	HEL1	P36113	551 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	YBR062C	P38239	180 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	SHE3	P38272	425 aa	Known RBP	12.31	□□□□□ -0.44
CUE1	YMR264W	HSL7	P38274	827 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	YHL026C	P38740	315 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	CKB2	P38930	258 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	SAE2	P46946	345 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	SLG1	P54867	378 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	THI20	Q08224	551 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	MDM20	Q12387	796 aa	Known RBP	12.31	□□□□□ -0.44
CUE1	YMR264W	AVL9	Q12500	764 aa		12.31	□□□□□ -0.44
CUE1	YMR264W	URA7	P28274	579 aa	Known RBP	12.3	□□□□□ -0.44
CUE1	YMR264W	KIP2	P28743	706 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	CSE2	P33308	149 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	YBP1	P38315	674 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	DIA4	P38705	446 aa	Predicted RBP	12.3	□□□□□ -0.44
CUE1	YMR264W	SMF2	P38778	549 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	TVP23	P38962	199 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	SIP5	P40210	489 aa	Known RBP	12.3	□□□□□ -0.44
CUE1	YMR264W	NCS6	P53088	359 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	ADA2	Q02336	434 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	YLL056C	Q12177	298 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	SRF1	Q12516	437 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	IZH4	Q99393	312 aa		12.3	□□□□□ -0.44
CUE1	YMR264W	ILS1	P09436	1072 aa	Known RBP	12.29	□□□□□ -0.44
CUE1	YMR264W	IMA3	P0CW40	589 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	IMA4	P0CW41	589 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	HXT3	P32466	567 aa	Known RBP	12.29	□□□□□ -0.44
CUE1	YMR264W	RTA1	P53047	317 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	BET4	Q00618	327 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	STP1	Q00947	519 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	RCR2	Q03446	210 aa	Known RBP	12.29	□□□□□ -0.44
CUE1	YMR264W	TDA5	Q06417	326 aa	Known RBP	12.29	□□□□□ -0.44
CUE1	YMR264W	TPO1	Q07824	586 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	IMA2	Q08295	589 aa		12.29	□□□□□ -0.44
CUE1	YMR264W	SET3	P36124	751 aa		12.28	□□□□□ -0.44
CUE1	YMR264W	POL31	P46957	487 aa		12.28	□□□□□ -0.44
CUE1	YMR264W	PCL10	P53124	433 aa		12.28	□□□□□ -0.44
CUE1	YMR264W	NMA111	P53920	997 aa		12.28	□□□□□ -0.44
CUE1	YMR264W	ADE13	Q05911	482 aa	Known RBP	12.28	□□□□□ -0.44
CUE1	YMR264W	NOB1	Q08444	459 aa	Known RBP	12.28	□□□□□ -0.44
CUE1	YMR264W	GAL80	P04387	435 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	TPK1	P06244	397 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	FUB1	P25659	250 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	YBR032W	P38223	100 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	NMD3	P38861	518 aa	Known RBP	12.27	□□□□□ -0.45
CUE1	YMR264W	REV7	P38927	245 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	RFX1	P48743	811 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	SKY1	Q03656	742 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	YDR338C	Q05497	695 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	CMS1	Q07897	291 aa	Known RBP	12.27	□□□□□ -0.45
CUE1	YMR264W	REC8	Q12188	680 aa		12.27	□□□□□ -0.45
CUE1	YMR264W	TEF1	P02994	458 aa	Known RBP	12.26	□□□□□ -0.45
CUE1	YMR264W	CIT2	P08679	460 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	TIF1	P10081	395 aa	Known RBP	12.26	□□□□□ -0.45
CUE1	YMR264W	CDC20	P26309	610 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	12.26	□□□□□ -0.45	not detected
CUE1	YMR264W	ECM1	P39715	212 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	ESL1	P40456	1118 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	SPC98	P53540	846 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	SHE9	Q04172	456 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	RCL1	Q08096	367 aa	Predicted RBP	12.26	□□□□□ -0.45
CUE1	YMR264W	APC5	Q08683	685 aa		12.26	□□□□□ -0.45
CUE1	YMR264W	SSC1	P0CS90	654 aa	Known RBP	12.25	□□□□□ -0.45
CUE1	YMR264W	NIP1	P32497	812 aa	Known RBP	12.25	□□□□□ -0.45
CUE1	YMR264W	MND2	P40577	368 aa		12.25	□□□□□ -0.45

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms