RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C GET2P40056 285 aa2.63□□□□□ -1.99
SOK2YMR016C VID28P40547 921 aa2.63□□□□□ -1.99
SOK2YMR016C YDL183CP48569 320 aa2.63□□□□□ -1.99
SOK2YMR016C SKY1Q03656 742 aa2.63□□□□□ -1.99
SOK2YMR016C IRC13Q08630 104 aa2.63□□□□□ -1.99
SOK2YMR016C HRP1Q99383 534 aaKnown RBP2.63□□□□□ -1.99
SOK2YMR016C YLR415CO13578 112 aa2.63□□□□□ -1.99
SOK2YMR016C HIS7P33734 552 aaKnown RBP2.63□□□□□ -1.99
SOK2YMR016C SAP190P36123 1033 aa2.63□□□□□ -1.99
SOK2YMR016C YJL206CP39529 758 aa2.63□□□□□ -1.99
SOK2YMR016C MAD2P40958 196 aa2.63□□□□□ -1.99
SOK2YMR016C SMX3P54999 86 aaPredicted RBP2.63□□□□□ -1.99
SOK2YMR016C ARG5,6Q01217 863 aa2.63□□□□□ -1.99
SOK2YMR016C PHM6Q05637 104 aa2.63□□□□□ -1.99
SOK2YMR016C VPS36Q06696 566 aa2.63□□□□□ -1.99
SOK2YMR016C DIN7Q12086 430 aa2.63□□□□□ -1.99
SOK2YMR016C RMP1Q12530 201 aa2.63□□□□□ -1.99
SOK2YMR016C DOP1Q03921 1698 aa2.62□□□□□ -1.99
SOK2YMR016C ORC2P32833 620 aa2.62□□□□□ -1.99
SOK2YMR016C BUD8P41698 603 aa2.62□□□□□ -1.99
SOK2YMR016C QRI7P43122 407 aa2.62□□□□□ -1.99
SOK2YMR016C YHM2Q04013 314 aa2.62□□□□□ -1.99
SOK2YMR016C TAF3Q12297 353 aa2.62□□□□□ -1.99
SOK2YMR016C NIC96P34077 839 aa2.61□□□□□ -1.99
SOK2YMR016C DOT6P40059 670 aaKnown RBP2.61□□□□□ -1.99
SOK2YMR016C YFL052WP43551 465 aa2.61□□□□□ -1.99
SOK2YMR016C SET2P46995 733 aaKnown RBP2.61□□□□□ -1.99
SOK2YMR016C TEX1P53851 422 aaKnown RBP2.61□□□□□ -1.99
SOK2YMR016C TFC6Q06339 672 aa2.61□□□□□ -1.99
SOK2YMR016C NGL1Q08213 363 aaKnown RBP2.61□□□□□ -1.99
SOK2YMR016C TGL5Q12043 749 aa2.61□□□□□ -1.99
SOK2YMR016C YPR027CQ12079 277 aa2.61□□□□□ -1.99
SOK2YMR016C HOP1P20050 605 aa2.61□□□□□ -1.99
SOK2YMR016C MSS1P32559 526 aaPredicted RBP2.61□□□□□ -1.99
SOK2YMR016C BCD1P38772 366 aa2.61□□□□□ -1.99
SOK2YMR016C HOS4P40480 1083 aa2.61□□□□□ -1.99
SOK2YMR016C ERR3P42222 437 aa2.61□□□□□ -1.99
SOK2YMR016C SPC105P53148 917 aa2.61□□□□□ -1.99
SOK2YMR016C CNM67P53865 581 aaKnown RBP2.61□□□□□ -1.99
SOK2YMR016C ORC4P54791 529 aa2.61□□□□□ -1.99
SOK2YMR016C PEX15Q08215 383 aa2.61□□□□□ -1.99
SOK2YMR016C BUD21Q08492 214 aaPredicted RBP2.61□□□□□ -1.99
SOK2YMR016C PWP2P25635 923 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C PRE4P30657 266 aa2.6□□□□□ -1.99
SOK2YMR016C EXO84P38261 753 aa2.6□□□□□ -1.99
SOK2YMR016C REV7P38927 245 aa2.6□□□□□ -1.99
SOK2YMR016C IMA5P40884 581 aa2.6□□□□□ -1.99
SOK2YMR016C NOP9P47077 666 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C BNA1P47096 177 aa2.6□□□□□ -1.99
SOK2YMR016C UBX4P54730 416 aa2.6□□□□□ -1.99
SOK2YMR016C YOL114CQ12322 202 aa2.6□□□□□ -1.99
SOK2YMR016C RPS17AP02407 136 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C ADH4P10127 382 aa2.6□□□□□ -1.99
SOK2YMR016C PGI1P12709 554 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C RPS17BP14127 136 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C ACO1P19414 778 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SOK2YMR016C TRX2P22803 104 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C UBS1P38290 277 aa2.6□□□□□ -1.99
SOK2YMR016C YEL020CP39994 560 aa2.6□□□□□ -1.99
SOK2YMR016C BAP3P41815 604 aa2.6□□□□□ -1.99
SOK2YMR016C UBC11P52492 156 aa2.6□□□□□ -1.99
SOK2YMR016C MNT2P53059 558 aa2.6□□□□□ -1.99
SOK2YMR016C YGR021WP53212 290 aa2.6□□□□□ -1.99
SOK2YMR016C MTD1Q02046 320 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C MRI1Q06489 411 aaKnown RBP2.6□□□□□ -1.99
SOK2YMR016C CWC2Q12046 339 aaPredicted RBP2.6□□□□□ -1.99
SOK2YMR016C RNR1P21524 888 aaKnown RBP2.59□□□□□ -1.99
SOK2YMR016C HRB1P38922 454 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
SOK2YMR016C NDC80P40460 691 aa2.59□□□□□ -1.99
SOK2YMR016C HIS6P40545 261 aa2.59□□□□□ -1.99
SOK2YMR016C MTL1P53214 551 aa2.59□□□□□ -1.99
SOK2YMR016C HLR1Q04429 423 aa2.59□□□□□ -1.99
SOK2YMR016C EIS1Q05050 843 aaKnown RBP2.59□□□□□ -1.99
SOK2YMR016C DBF20P32328 564 aa2.59□□□□□ -2
SOK2YMR016C APL2P36000 726 aaPredicted RBP2.59□□□□□ -2
SOK2YMR016C YBR259WP38338 688 aa2.59□□□□□ -2
SOK2YMR016C CRG1P38892 291 aaRIP-Chip data2.59□□□□□ -2not detected
SOK2YMR016C SPC72P39723 622 aa2.59□□□□□ -2
SOK2YMR016C ARG2P40360 574 aa2.59□□□□□ -2
SOK2YMR016C BIT61P47041 543 aa2.59□□□□□ -2
SOK2YMR016C PRP31P49704 494 aaPredicted RBP2.59□□□□□ -2
SOK2YMR016C YNR071CP53757 342 aa2.59□□□□□ -2
SOK2YMR016C ISA1Q07821 250 aaPredicted RBP2.59□□□□□ -2
SOK2YMR016C RRP6Q12149 733 aaKnown RBP2.59□□□□□ -2
SOK2YMR016C FRS1P15624 595 aaKnown RBP2.58□□□□□ -2
SOK2YMR016C PTP2P29461 750 aa2.58□□□□□ -2
SOK2YMR016C RMA1P36001 430 aaKnown RBP2.58□□□□□ -2
SOK2YMR016C MTR3P48240 250 aaPredicted RBP2.58□□□□□ -2
SOK2YMR016C SLD3P53135 668 aa2.58□□□□□ -2
SOK2YMR016C PTA1Q01329 785 aaPredicted RBP2.58□□□□□ -2
SOK2YMR016C ATG16Q03818 150 aa2.58□□□□□ -2
SOK2YMR016C SEG1Q04279 960 aa2.58□□□□□ -2
SOK2YMR016C THI22Q06490 572 aa2.58□□□□□ -2
SOK2YMR016C MLC2Q06580 163 aa2.58□□□□□ -2
SOK2YMR016C ECM3Q99252 613 aa2.58□□□□□ -2
SOK2YMR016C YEL076C-AP0CX16 216 aa2.58□□□□□ -2
SOK2YMR016C YLR464WP0CX17 216 aa2.58□□□□□ -2
SOK2YMR016C PYC1P11154 1178 aaKnown RBP2.58□□□□□ -2
SOK2YMR016C GLG1P36143 616 aa2.58□□□□□ -2
SOK2YMR016C TRZ1P36159 838 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 158.2 ms