RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C YLR125WQ12138 136 aa12.7□□□□□ -0.38
BDF1YLR399C GLE1Q12315 538 aa12.7□□□□□ -0.38
BDF1YLR399C RPL8AP17076 256 aaKnown RBP12.69□□□□□ -0.38
BDF1YLR399C CHS3P29465 1165 aa12.69□□□□□ -0.38
BDF1YLR399C PFF1P38244 976 aa12.69□□□□□ -0.38
BDF1YLR399C PET100P38958 111 aa12.69□□□□□ -0.38
BDF1YLR399C SAH1P39954 449 aaKnown RBP12.69□□□□□ -0.38
BDF1YLR399C SNL1P40548 159 aa12.69□□□□□ -0.38
BDF1YLR399C RLP7P40693 322 aaKnown RBP12.69□□□□□ -0.38
BDF1YLR399C COG2P53271 262 aa12.69□□□□□ -0.38
BDF1YLR399C TEP1P53916 434 aa12.69□□□□□ -0.38
BDF1YLR399C KEL3Q08979 651 aaPredicted RBP12.69□□□□□ -0.38
BDF1YLR399C SLX4Q12098 748 aa12.69□□□□□ -0.38
BDF1YLR399C COR1P07256 457 aa12.69□□□□□ -0.38
BDF1YLR399C UBA1P22515 1024 aaKnown RBP12.69□□□□□ -0.38
BDF1YLR399C RME1P32338 300 aaKnown RBP12.69□□□□□ -0.38
BDF1YLR399C IRE1P32361 1115 aa12.69□□□□□ -0.38
BDF1YLR399C PGM2P37012 569 aaKnown RBP12.69□□□□□ -0.38
BDF1YLR399C AIM21P40563 679 aa12.69□□□□□ -0.38
BDF1YLR399C ATG11Q12527 1178 aa12.69□□□□□ -0.38
BDF1YLR399C PMS1P14242 873 aa12.68□□□□□ -0.38
BDF1YLR399C RCN1P36054 211 aa12.68□□□□□ -0.38
BDF1YLR399C CLA4P48562 842 aa12.68□□□□□ -0.38
BDF1YLR399C NUT1P53114 1132 aa12.68□□□□□ -0.38
BDF1YLR399C GPI17Q04080 534 aa12.68□□□□□ -0.38
BDF1YLR399C COA4Q05809 96 aa12.68□□□□□ -0.38
BDF1YLR399C ADE13Q05911 482 aaKnown RBP12.68□□□□□ -0.38
BDF1YLR399C UIP4Q08926 304 aa12.68□□□□□ -0.38
BDF1YLR399C BRR1Q99177 341 aaPredicted RBP12.68□□□□□ -0.38
BDF1YLR399C SRO9P25567 434 aaKnown RBP12.68□□□□□ -0.38
BDF1YLR399C YKR075CP36155 307 aa12.68□□□□□ -0.38
BDF1YLR399C SSP120P39931 234 aaKnown RBP12.68□□□□□ -0.38
BDF1YLR399C BRE2P43132 505 aa12.68□□□□□ -0.38
BDF1YLR399C RGD2P43556 714 aa12.68□□□□□ -0.38
BDF1YLR399C MAD3P47074 515 aa12.68□□□□□ -0.38
BDF1YLR399C NUP84P52891 726 aa12.68□□□□□ -0.38
BDF1YLR399C TIM8P57744 87 aa12.68□□□□□ -0.38
BDF1YLR399C TFB3Q03290 321 aa12.68□□□□□ -0.38
BDF1YLR399C SUE1Q06524 206 aa12.68□□□□□ -0.38
BDF1YLR399C ATP2P00830 511 aaKnown RBP12.67□□□□□ -0.38
BDF1YLR399C CDC24P11433 854 aaPredicted RBP12.67□□□□□ -0.38
BDF1YLR399C OCT1P35999 772 aa12.67□□□□□ -0.38
BDF1YLR399C CDC73Q06697 393 aa12.67□□□□□ -0.38
BDF1YLR399C MRPL32P25348 183 aa12.66□□□□□ -0.38
BDF1YLR399C TFC1P32367 649 aa12.66□□□□□ -0.38
BDF1YLR399C CHS6P40955 746 aa12.66□□□□□ -0.38
BDF1YLR399C FAR3P46671 204 aa12.66□□□□□ -0.38
BDF1YLR399C EMC2P47133 292 aaKnown RBP12.66□□□□□ -0.38
BDF1YLR399C YTP1P53584 459 aa12.66□□□□□ -0.38
BDF1YLR399C SRL4Q03085 281 aa12.66□□□□□ -0.38
BDF1YLR399C ARP9Q05123 467 aa12.66□□□□□ -0.38
BDF1YLR399C BUD7Q08754 746 aa12.66□□□□□ -0.38
BDF1YLR399C SCM3Q12334 223 aa12.66□□□□□ -0.38
BDF1YLR399C HTZ1Q12692 134 aaKnown RBP12.66□□□□□ -0.38
BDF1YLR399C KDX1P36005 433 aa12.66□□□□□ -0.38
BDF1YLR399C SHC1P39000 512 aa12.66□□□□□ -0.38
BDF1YLR399C MET18P40469 1032 aa12.66□□□□□ -0.38
BDF1YLR399C NAN1Q02931 896 aaKnown RBP12.66□□□□□ -0.38
BDF1YLR399C CDA1Q06702 301 aa12.66□□□□□ -0.38
BDF1YLR399C TMA46Q12000 345 aaKnown RBP12.66□□□□□ -0.38
BDF1YLR399C YDL206WQ12424 762 aa12.66□□□□□ -0.38
BDF1YLR399C TIF1P10081 395 aaKnown RBP12.65□□□□□ -0.38
BDF1YLR399C TFB1P32776 642 aa12.65□□□□□ -0.38
BDF1YLR399C RPS0AP32905 252 aaKnown RBP12.65□□□□□ -0.38
BDF1YLR399C MSR1P38714 643 aa12.65□□□□□ -0.38
BDF1YLR399C AST2P39945 430 aaKnown RBP12.65□□□□□ -0.38
BDF1YLR399C SAD1P43589 448 aa12.65□□□□□ -0.38
BDF1YLR399C SAE2P46946 345 aa12.65□□□□□ -0.38
BDF1YLR399C PRO2P54885 456 aaKnown RBP12.65□□□□□ -0.38
BDF1YLR399C YML108WQ03759 105 aa12.65□□□□□ -0.38
BDF1YLR399C PRP6P19735 899 aaPredicted RBP12.65□□□□□ -0.39
BDF1YLR399C CLN1P20437 546 aa12.65□□□□□ -0.39
BDF1YLR399C ITR2P30606 609 aa12.65□□□□□ -0.39
BDF1YLR399C YBL036CP38197 257 aa12.65□□□□□ -0.39
BDF1YLR399C SUL1P38359 859 aa12.65□□□□□ -0.39
BDF1YLR399C UBP7P40453 1071 aa12.65□□□□□ -0.39
BDF1YLR399C JJJ2P46997 583 aa12.65□□□□□ -0.39
BDF1YLR399C DIP5P53388 608 aa12.65□□□□□ -0.39
BDF1YLR399C LSC1P53598 329 aaKnown RBP12.65□□□□□ -0.39
BDF1YLR399C FOX2Q02207 900 aaKnown RBP12.65□□□□□ -0.39
BDF1YLR399C GPM3Q12326 303 aa12.65□□□□□ -0.39
BDF1YLR399C LSO1Q3E827 93 aa12.65□□□□□ -0.39
BDF1YLR399C DAL2P25335 343 aa12.64□□□□□ -0.39
BDF1YLR399C ADP1P25371 1049 aa12.64□□□□□ -0.39
BDF1YLR399C TGL3P40308 642 aa12.64□□□□□ -0.39
BDF1YLR399C FIN1Q03898 291 aa12.64□□□□□ -0.39
BDF1YLR399C ENV9Q08651 330 aa12.64□□□□□ -0.39
BDF1YLR399C RRP36Q12481 300 aaPredicted RBP12.64□□□□□ -0.39
BDF1YLR399C FIG2P25653 1609 aa12.64□□□□□ -0.39
BDF1YLR399C TUB3P09734 445 aaKnown RBP12.63□□□□□ -0.39
BDF1YLR399C PCK1P10963 549 aa12.63□□□□□ -0.39
BDF1YLR399C SPR1P32603 445 aa12.63□□□□□ -0.39
BDF1YLR399C SED5Q01590 340 aa12.63□□□□□ -0.39
BDF1YLR399C RNY1Q02933 434 aaKnown RBP12.63□□□□□ -0.39
BDF1YLR399C PRM6Q04705 352 aa12.63□□□□□ -0.39
BDF1YLR399C SPC2Q04969 178 aa12.63□□□□□ -0.39
BDF1YLR399C COQ9Q05779 260 aa12.63□□□□□ -0.39
BDF1YLR399C SEC10Q06245 871 aa12.63□□□□□ -0.39
BDF1YLR399C YDR018CQ12185 396 aa12.63□□□□□ -0.39
BDF1YLR399C YLR278CQ05854 1341 aa12.63□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 141.8 ms