RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C ELF1P36053 145 aa4.26□□□□□ -1.73
YPT52YKR014C YHR033WP38690 423 aa4.26□□□□□ -1.73
YPT52YKR014C PMT6P42934 759 aa4.26□□□□□ -1.73
YPT52YKR014C RNR4P49723 345 aaKnown RBP4.26□□□□□ -1.73
YPT52YKR014C MRK1P50873 501 aa4.26□□□□□ -1.73
YPT52YKR014C FDC1Q03034 503 aa4.26□□□□□ -1.73
YPT52YKR014C IZH3Q07959 543 aa4.26□□□□□ -1.73
YPT52YKR014C AIM41Q12032 185 aa4.26□□□□□ -1.73
YPT52YKR014C BNR1P40450 1375 aa4.26□□□□□ -1.73
YPT52YKR014C PRE4P30657 266 aa4.25□□□□□ -1.73
YPT52YKR014C MSS1P32559 526 aaPredicted RBP4.25□□□□□ -1.73
YPT52YKR014C PAC2P39937 518 aa4.25□□□□□ -1.73
YPT52YKR014C VID28P40547 921 aa4.25□□□□□ -1.73
YPT52YKR014C IES1P43579 692 aa4.25□□□□□ -1.73
YPT52YKR014C RMP1Q12530 201 aa4.25□□□□□ -1.73
YPT52YKR014C RPS21AP0C0V8 87 aaKnown RBP4.24□□□□□ -1.73
YPT52YKR014C STE12P13574 688 aa4.24□□□□□ -1.73
YPT52YKR014C ACO1P19414 778 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
YPT52YKR014C YMC2P38087 329 aa4.24□□□□□ -1.73
YPT52YKR014C PIH1P38768 344 aa4.24□□□□□ -1.73
YPT52YKR014C PPE1P38796 400 aa4.24□□□□□ -1.73
YPT52YKR014C TMN3P40071 706 aa4.24□□□□□ -1.73
YPT52YKR014C DUG1P43616 481 aaKnown RBP4.24□□□□□ -1.73
YPT52YKR014C IMO32P53219 342 aa4.24□□□□□ -1.73
YPT52YKR014C HLR1Q04429 423 aa4.24□□□□□ -1.73
YPT52YKR014C COQ11Q05892 277 aa4.24□□□□□ -1.73
YPT52YKR014C YNL162W-AQ3E7A8 72 aa4.24□□□□□ -1.73
YPT52YKR014C ADE5,7P07244 802 aaKnown RBP4.23□□□□□ -1.73
YPT52YKR014C SAT4P25333 603 aaKnown RBP4.23□□□□□ -1.73
YPT52YKR014C UGP1P32861 499 aaKnown RBP4.23□□□□□ -1.73
YPT52YKR014C DHR2P36009 735 aaPredicted RBP4.23□□□□□ -1.73
YPT52YKR014C FAT1P38225 669 aa4.23□□□□□ -1.73
YPT52YKR014C PMC1P38929 1173 aaPredicted RBP4.23□□□□□ -1.73
YPT52YKR014C UBP12P39538 1254 aa4.23□□□□□ -1.73
YPT52YKR014C YEL025CP39991 1188 aa4.23□□□□□ -1.73
YPT52YKR014C YDR179W-AQ03983 463 aa4.23□□□□□ -1.73
YPT52YKR014C TUF1P02992 437 aaKnown RBP4.22□□□□□ -1.73
YPT52YKR014C MF(ALPHA)2P32435 120 aa4.22□□□□□ -1.73
YPT52YKR014C YEN1P40028 759 aa4.22□□□□□ -1.73
YPT52YKR014C FTR1P40088 404 aa4.22□□□□□ -1.73
YPT52YKR014C PEA2P40091 420 aa4.22□□□□□ -1.73
YPT52YKR014C PRM2P40534 656 aa4.22□□□□□ -1.73
YPT52YKR014C SKY1Q03656 742 aa4.22□□□□□ -1.73
YPT52YKR014C TRE2Q08693 809 aa4.22□□□□□ -1.73
YPT52YKR014C YPR027CQ12079 277 aa4.22□□□□□ -1.73
YPT52YKR014C PHO5P00635 467 aa4.21□□□□□ -1.74
YPT52YKR014C TPK2P06245 380 aa4.21□□□□□ -1.74
YPT52YKR014C AEP2P22136 580 aa4.21□□□□□ -1.74
YPT52YKR014C VPS34P22543 875 aa4.21□□□□□ -1.74
YPT52YKR014C ORC2P32833 620 aa4.21□□□□□ -1.74
YPT52YKR014C FLO10P36170 1169 aa4.21□□□□□ -1.74
YPT52YKR014C RIM4P38741 713 aa4.21□□□□□ -1.74
YPT52YKR014C CRG1P38892 291 aaRIP-Chip data4.21□□□□□ -1.74not detected
YPT52YKR014C ASN1P49089 572 aaKnown RBP4.21□□□□□ -1.74
YPT52YKR014C SPC105P53148 917 aa4.21□□□□□ -1.74
YPT52YKR014C SNF12P53628 566 aa4.21□□□□□ -1.74
YPT52YKR014C SQS1P53866 767 aaKnown RBP4.21□□□□□ -1.74
YPT52YKR014C MFM1Q02783 413 aa4.21□□□□□ -1.74
YPT52YKR014C FMP30Q02883 468 aa4.21□□□□□ -1.74
YPT52YKR014C TRS23Q03784 219 aa4.21□□□□□ -1.74
YPT52YKR014C YPL216WQ08964 1102 aa4.21□□□□□ -1.74
YPT52YKR014C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
YPT52YKR014C CDC26P14724 124 aa4.2□□□□□ -1.74
YPT52YKR014C SRP68P38687 599 aaKnown RBP4.2□□□□□ -1.74
YPT52YKR014C MIT1P40002 666 aa4.2□□□□□ -1.74
YPT52YKR014C YGR054WP53235 642 aaKnown RBP4.2□□□□□ -1.74
YPT52YKR014C YCG1Q06680 1035 aa4.2□□□□□ -1.74
YPT52YKR014C YDL073WQ07454 984 aa4.2□□□□□ -1.74
YPT52YKR014C SEC12P11655 471 aa4.19□□□□□ -1.74
YPT52YKR014C HOM2P13663 365 aaKnown RBP4.19□□□□□ -1.74
YPT52YKR014C TUP1P16649 713 aa4.19□□□□□ -1.74
YPT52YKR014C CAP1P28495 268 aaKnown RBP4.19□□□□□ -1.74
YPT52YKR014C GPP2P40106 250 aaKnown RBP4.19□□□□□ -1.74
YPT52YKR014C SLD3P53135 668 aa4.19□□□□□ -1.74
YPT52YKR014C TIM50Q02776 476 aa4.19□□□□□ -1.74
YPT52YKR014C EFR3Q03653 782 aaKnown RBP4.19□□□□□ -1.74
YPT52YKR014C NGL1Q08213 363 aaKnown RBP4.19□□□□□ -1.74
YPT52YKR014C TGS1Q12052 315 aa4.19□□□□□ -1.74
YPT52YKR014C ULA1Q12059 462 aa4.19□□□□□ -1.74
YPT52YKR014C HMG2P12684 1045 aa4.18□□□□□ -1.74
YPT52YKR014C STE4P18851 423 aa4.18□□□□□ -1.74
YPT52YKR014C EUG1P32474 517 aa4.18□□□□□ -1.74
YPT52YKR014C GRX4P32642 244 aa4.18□□□□□ -1.74
YPT52YKR014C LOT5P34234 306 aa4.18□□□□□ -1.74
YPT52YKR014C CDS1P38221 457 aa4.18□□□□□ -1.74
YPT52YKR014C EMP65P40085 556 aa4.18□□□□□ -1.74
YPT52YKR014C CPR8P53728 308 aa4.18□□□□□ -1.74
YPT52YKR014C MRI1Q06489 411 aaKnown RBP4.18□□□□□ -1.74
YPT52YKR014C ZPS1Q12512 249 aa4.18□□□□□ -1.74
YPT52YKR014C TSR4P25040 408 aa4.17□□□□□ -1.74
YPT52YKR014C DAL3P32459 195 aa4.17□□□□□ -1.74
YPT52YKR014C MRPL7P36519 292 aa4.17□□□□□ -1.74
YPT52YKR014C YIP4P53093 235 aa4.17□□□□□ -1.74
YPT52YKR014C MDR1P53258 950 aa4.17□□□□□ -1.74
YPT52YKR014C GFD1Q04839 188 aaKnown RBP4.17□□□□□ -1.74
YPT52YKR014C THI7Q05998 598 aa4.17□□□□□ -1.74
YPT52YKR014C CNE1P27825 502 aa4.16□□□□□ -1.74
YPT52YKR014C YMC1P32331 307 aa4.16□□□□□ -1.74
YPT52YKR014C HXT4P32467 576 aa4.16□□□□□ -1.74
YPT52YKR014C YJL193WP39542 402 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms