RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W YIR042CP40586 236 aa6.16□□□□□ -1.42
SPC42YKL042W AMA1P50082 593 aa6.16□□□□□ -1.42
SPC42YKL042W MDR1P53258 950 aa6.16□□□□□ -1.42
SPC42YKL042W YNR071CP53757 342 aa6.16□□□□□ -1.42
SPC42YKL042W DIN7Q12086 430 aa6.16□□□□□ -1.42
SPC42YKL042W MET3P08536 511 aa6.15□□□□□ -1.42
SPC42YKL042W PRE10P21242 288 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SPC42YKL042W STE11P23561 717 aa6.15□□□□□ -1.42
SPC42YKL042W SHM2P37291 469 aaKnown RBP6.15□□□□□ -1.42
SPC42YKL042W IML2P47031 731 aa6.15□□□□□ -1.42
SPC42YKL042W MUP1P50276 574 aa6.15□□□□□ -1.42
SPC42YKL042W GTR1Q00582 310 aa6.15□□□□□ -1.42
SPC42YKL042W DLT1Q04216 342 aa6.15□□□□□ -1.42
SPC42YKL042W THI22Q06490 572 aa6.15□□□□□ -1.42
SPC42YKL042W HOS1Q12214 470 aa6.15□□□□□ -1.42
SPC42YKL042W LAS17Q12446 633 aa6.15□□□□□ -1.42
SPC42YKL042W TRP4P07285 380 aaPredicted RBP6.14□□□□□ -1.43
SPC42YKL042W RMA1P36001 430 aaKnown RBP6.14□□□□□ -1.43
SPC42YKL042W YLF2P38746 405 aa6.14□□□□□ -1.43
SPC42YKL042W PPE1P38796 400 aa6.14□□□□□ -1.43
SPC42YKL042W SPC72P39723 622 aa6.14□□□□□ -1.43
SPC42YKL042W BAP3P41815 604 aa6.14□□□□□ -1.43
SPC42YKL042W MCM6P53091 1017 aaKnown RBP6.14□□□□□ -1.43
SPC42YKL042W TRI1Q05024 226 aa6.14□□□□□ -1.43
SPC42YKL042W CIA1Q05583 330 aa6.14□□□□□ -1.43
SPC42YKL042W PHO5P00635 467 aa6.13□□□□□ -1.43
SPC42YKL042W URA3P03962 267 aa6.13□□□□□ -1.43
SPC42YKL042W CAF20P12962 161 aaKnown RBP6.13□□□□□ -1.43
SPC42YKL042W BEM3P32873 1128 aa6.13□□□□□ -1.43
SPC42YKL042W FMO1P38866 432 aa6.13□□□□□ -1.43
SPC42YKL042W NUP60P39705 539 aa6.13□□□□□ -1.43
SPC42YKL042W TAH11P47112 604 aa6.13□□□□□ -1.43
SPC42YKL042W MNN10P50108 393 aaKnown RBP6.13□□□□□ -1.43
SPC42YKL042W YCG1Q06680 1035 aa6.13□□□□□ -1.43
SPC42YKL042W AIM41Q12032 185 aa6.13□□□□□ -1.43
SPC42YKL042W SSM4P40318 1319 aa6.13□□□□□ -1.43
SPC42YKL042W YLR358CO13565 187 aa6.12□□□□□ -1.43
SPC42YKL042W ARG1P22768 420 aa6.12□□□□□ -1.43
SPC42YKL042W MVD1P32377 396 aaKnown RBP6.12□□□□□ -1.43
SPC42YKL042W PSY4P38193 441 aa6.12□□□□□ -1.43
SPC42YKL042W CRG1P38892 291 aaRIP-Chip data6.12□□□□□ -1.43not detected
SPC42YKL042W STT3P39007 718 aaKnown RBP6.12□□□□□ -1.43
SPC42YKL042W ELO3P40319 345 aa6.12□□□□□ -1.43
SPC42YKL042W HOS4P40480 1083 aa6.12□□□□□ -1.43
SPC42YKL042W YIL077CP40508 320 aa6.12□□□□□ -1.43
SPC42YKL042W TRS130Q03660 1102 aa6.12□□□□□ -1.43
SPC42YKL042W SSP2Q08646 371 aa6.12□□□□□ -1.43
SPC42YKL042W TUP1P16649 713 aa6.11□□□□□ -1.43
SPC42YKL042W CDS1P38221 457 aa6.11□□□□□ -1.43
SPC42YKL042W YBR053CP38235 358 aa6.11□□□□□ -1.43
SPC42YKL042W COS111P38308 924 aa6.11□□□□□ -1.43
SPC42YKL042W FTR1P40088 404 aa6.11□□□□□ -1.43
SPC42YKL042W PIG2P40187 538 aa6.11□□□□□ -1.43
SPC42YKL042W CPR6P53691 371 aaKnown RBP6.11□□□□□ -1.43
SPC42YKL042W EIS1Q05050 843 aaKnown RBP6.11□□□□□ -1.43
SPC42YKL042W GFA1P14742 717 aaKnown RBP6.1□□□□□ -1.43
SPC42YKL042W MCM3P24279 971 aaKnown RBP6.1□□□□□ -1.43
SPC42YKL042W FEN2P25621 512 aaKnown RBP6.1□□□□□ -1.43
SPC42YKL042W BCS1P32839 456 aa6.1□□□□□ -1.43
SPC42YKL042W YDL183CP48569 320 aa6.1□□□□□ -1.43
SPC42YKL042W YFT2Q06676 274 aa6.1□□□□□ -1.43
SPC42YKL042W TUF1P02992 437 aaKnown RBP6.09□□□□□ -1.43
SPC42YKL042W MIS1P09440 975 aaKnown RBP6.09□□□□□ -1.43
SPC42YKL042W POL3P15436 1097 aa6.09□□□□□ -1.43
SPC42YKL042W DCG1P32460 244 aa6.09□□□□□ -1.43
SPC42YKL042W BCD1P38772 366 aa6.09□□□□□ -1.43
SPC42YKL042W SFB3P38810 929 aa6.09□□□□□ -1.43
SPC42YKL042W ERP2P39704 215 aa6.09□□□□□ -1.43
SPC42YKL042W PUG1P40100 303 aa6.09□□□□□ -1.43
SPC42YKL042W SMK1P41808 388 aa6.09□□□□□ -1.43
SPC42YKL042W ARC35P53731 342 aaKnown RBP6.09□□□□□ -1.43
SPC42YKL042W FDC1Q03034 503 aa6.09□□□□□ -1.43
SPC42YKL042W RGC1Q06108 1083 aaKnown RBP6.09□□□□□ -1.43
SPC42YKL042W IWR1Q07532 353 aaPredicted RBP6.09□□□□□ -1.43
SPC42YKL042W CRD1Q07560 283 aa6.09□□□□□ -1.43
SPC42YKL042W AAD4Q07747 329 aa6.09□□□□□ -1.43
SPC42YKL042W SIR1P21691 654 aa6.08□□□□□ -1.44
SPC42YKL042W PRP28P23394 588 aa6.08□□□□□ -1.44
SPC42YKL042W YCL049CP25577 312 aa6.08□□□□□ -1.44
SPC42YKL042W XRS2P33301 854 aa6.08□□□□□ -1.44
SPC42YKL042W EHT1P38295 451 aa6.08□□□□□ -1.44
SPC42YKL042W FAF1P40546 346 aaPredicted RBP6.08□□□□□ -1.44
SPC42YKL042W BUL1P48524 976 aa6.08□□□□□ -1.44
SPC42YKL042W RFX1P48743 811 aa6.08□□□□□ -1.44
SPC42YKL042W UBA2P52488 636 aa6.08□□□□□ -1.44
SPC42YKL042W MRPL13Q02204 264 aa6.08□□□□□ -1.44
SPC42YKL042W NEW1Q08972 1196 aaKnown RBP6.08□□□□□ -1.44
SPC42YKL042W CHS5Q12114 671 aaKnown RBP6.08□□□□□ -1.44
SPC42YKL042W NUC1P08466 329 aa6.07□□□□□ -1.44
SPC42YKL042W SEC12P11655 471 aa6.07□□□□□ -1.44
SPC42YKL042W CLB4P24871 460 aa6.07□□□□□ -1.44
SPC42YKL042W HIS7P33734 552 aaKnown RBP6.07□□□□□ -1.44
SPC42YKL042W REV7P38927 245 aa6.07□□□□□ -1.44
SPC42YKL042W GSM1P42950 618 aa6.07□□□□□ -1.44
SPC42YKL042W UBC11P52492 156 aa6.07□□□□□ -1.44
SPC42YKL042W ACS1Q01574 713 aa6.07□□□□□ -1.44
SPC42YKL042W TIM50Q02776 476 aa6.07□□□□□ -1.44
SPC42YKL042W YMR018WQ04364 514 aa6.07□□□□□ -1.44
SPC42YKL042W COG4Q06096 861 aa6.07□□□□□ -1.44
SPC42YKL042W OPY2Q06810 360 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms