RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W TAF11Q04226 346 aa2.52□□□□□ -2.01
CBF2YGR140W TRI1Q05024 226 aa2.52□□□□□ -2.01
CBF2YGR140W COX17Q12287 69 aa2.52□□□□□ -2.01
CBF2YGR140W YBR126W-AQ8TGU7 68 aa2.52□□□□□ -2.01
CBF2YGR140W ERG20P08524 352 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W CDC24P11433 854 aaPredicted RBP2.51□□□□□ -2.01
CBF2YGR140W SUI2P20459 304 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W KRR1P25586 316 aaPredicted RBP2.51□□□□□ -2.01
CBF2YGR140W RPN2P32565 945 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W RMA1P36001 430 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W KTR3P38130 404 aaPredicted RBP2.51□□□□□ -2.01
CBF2YGR140W PUS4P48567 403 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W TAF4P50105 388 aa2.51□□□□□ -2.01
CBF2YGR140W ALT1P52893 592 aa2.51□□□□□ -2.01
CBF2YGR140W TEL2P53038 688 aa2.51□□□□□ -2.01
CBF2YGR140W MTC3P53077 123 aa2.51□□□□□ -2.01
CBF2YGR140W BRE5P53741 515 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W CIK1Q01649 594 aa2.51□□□□□ -2.01
CBF2YGR140W YPL071CQ02864 156 aa2.51□□□□□ -2.01
CBF2YGR140W YMR155WQ03795 547 aa2.51□□□□□ -2.01
CBF2YGR140W TY1A-MR1Q04215 440 aa2.51□□□□□ -2.01
CBF2YGR140W IRC3Q06683 689 aa2.51□□□□□ -2.01
CBF2YGR140W SYT1Q06836 1226 aa2.51□□□□□ -2.01
CBF2YGR140W TY1A-BLQ12266 440 aa2.51□□□□□ -2.01
CBF2YGR140W DBP10Q12389 995 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W SEC12P11655 471 aa2.51□□□□□ -2.01
CBF2YGR140W PMS1P14242 873 aa2.51□□□□□ -2.01
CBF2YGR140W ACO1P19414 778 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
CBF2YGR140W REC107P21651 314 aa2.51□□□□□ -2.01
CBF2YGR140W SWI4P25302 1093 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W RPC53P25441 422 aa2.51□□□□□ -2.01
CBF2YGR140W MIP6P38760 659 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W RRM3P38766 723 aa2.51□□□□□ -2.01
CBF2YGR140W YHR078WP38799 552 aa2.51□□□□□ -2.01
CBF2YGR140W YJL068CP40363 299 aa2.51□□□□□ -2.01
CBF2YGR140W PXA1P41909 870 aa2.51□□□□□ -2.01
CBF2YGR140W SKP2P42843 763 aa2.51□□□□□ -2.01
CBF2YGR140W GPI8P49018 411 aa2.51□□□□□ -2.01
CBF2YGR140W VBA4Q04602 768 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W CRD1Q07560 283 aa2.51□□□□□ -2.01
CBF2YGR140W AIM41Q12032 185 aa2.51□□□□□ -2.01
CBF2YGR140W RCN2Q12044 265 aa2.51□□□□□ -2.01
CBF2YGR140W ATG11Q12527 1178 aa2.51□□□□□ -2.01
CBF2YGR140W GPM1P00950 247 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W ARG3P05150 338 aa2.51□□□□□ -2.01
CBF2YGR140W RPP2AP05319 106 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W TRK1P12685 1235 aa2.51□□□□□ -2.01
CBF2YGR140W CDC26P14724 124 aa2.51□□□□□ -2.01
CBF2YGR140W PRP22P24384 1145 aaKnown RBP2.51□□□□□ -2.01
CBF2YGR140W OCA4P25366 362 aa2.51□□□□□ -2.01
CBF2YGR140W TRK2P28584 889 aa2.51□□□□□ -2.01
CBF2YGR140W PET127P32606 800 aa2.51□□□□□ -2.01
CBF2YGR140W NPL6P32832 435 aa2.51□□□□□ -2.01
CBF2YGR140W YBR225WP38321 900 aa2.51□□□□□ -2.01
CBF2YGR140W SAK1P38990 1142 aa2.51□□□□□ -2.01
CBF2YGR140W ZRG8P40021 1076 aa2.51□□□□□ -2.01
CBF2YGR140W YIL166CP40445 542 aa2.51□□□□□ -2.01
CBF2YGR140W IST3P40565 148 aaPredicted RBP2.51□□□□□ -2.01
CBF2YGR140W MNT2P53059 558 aa2.51□□□□□ -2.01
CBF2YGR140W YGR012WP53206 393 aa2.51□□□□□ -2.01
CBF2YGR140W YAP1802P53309 568 aa2.51□□□□□ -2.01
CBF2YGR140W ARP4P80428 489 aa2.51□□□□□ -2.01
CBF2YGR140W VPS64Q03944 604 aa2.51□□□□□ -2.01
CBF2YGR140W AAD4Q07747 329 aa2.51□□□□□ -2.01
CBF2YGR140W XYL2Q07993 356 aa2.51□□□□□ -2.01
CBF2YGR140W TRM8Q12009 286 aa2.51□□□□□ -2.01
CBF2YGR140W ADE3P07245 946 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W DAL5P15365 543 aa2.5□□□□□ -2.01
CBF2YGR140W ECM32P32644 1121 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W MAC1P35192 417 aa2.5□□□□□ -2.01
CBF2YGR140W APE3P37302 537 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W AKL1P38080 1108 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W RKM3P38222 552 aa2.5□□□□□ -2.01
CBF2YGR140W RXT2P38255 430 aa2.5□□□□□ -2.01
CBF2YGR140W YBR138CP38277 524 aa2.5□□□□□ -2.01
CBF2YGR140W GDI1P39958 451 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W DJP1P40564 432 aa2.5□□□□□ -2.01
CBF2YGR140W SSU1P41930 458 aa2.5□□□□□ -2.01
CBF2YGR140W ZAP1P47043 880 aa2.5□□□□□ -2.01
CBF2YGR140W DUO1P53168 247 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W SPO1P53541 631 aa2.5□□□□□ -2.01
CBF2YGR140W UTP21Q06078 939 aaPredicted RBP2.5□□□□□ -2.01
CBF2YGR140W ADY3Q07732 790 aa2.5□□□□□ -2.01
CBF2YGR140W CWH43P25618 953 aa2.5□□□□□ -2.01
CBF2YGR140W RSC6P25632 483 aa2.5□□□□□ -2.01
CBF2YGR140W SET3P36124 751 aa2.5□□□□□ -2.01
CBF2YGR140W LRP1P38801 184 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W ART5P53244 586 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W YPL108WQ02872 168 aaPredicted RBP2.5□□□□□ -2.01
CBF2YGR140W STP4Q07351 490 aa2.5□□□□□ -2.01
CBF2YGR140W NUS1Q12063 375 aa2.5□□□□□ -2.01
CBF2YGR140W RTK1Q12100 620 aaPredicted RBP2.5□□□□□ -2.01
CBF2YGR140W RTN2Q12443 393 aa2.5□□□□□ -2.01
CBF2YGR140W ERG27Q12452 347 aaKnown RBP2.5□□□□□ -2.01
CBF2YGR140W MET17P06106 444 aa2.49□□□□□ -2.01
CBF2YGR140W FRS1P15624 595 aaKnown RBP2.49□□□□□ -2.01
CBF2YGR140W TRX1P22217 103 aaKnown RBP2.49□□□□□ -2.01
CBF2YGR140W YCK2P23292 546 aaKnown RBP2.49□□□□□ -2.01
CBF2YGR140W MNE1P24720 663 aa2.49□□□□□ -2.01
CBF2YGR140W ARP2P32381 391 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 83 ms