RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C SCC4P40090 624 aa6.74□□□□□ -1.33
YPT1YFL038C AXL1P40851 1208 aa6.74□□□□□ -1.33
YPT1YFL038C TFG1P41895 735 aaPredicted RBP6.74□□□□□ -1.33
YPT1YFL038C YJL107CP42947 387 aa6.74□□□□□ -1.33
YPT1YFL038C ALY2P47029 1046 aa6.74□□□□□ -1.33
YPT1YFL038C RPL4BP49626 362 aaKnown RBP6.74□□□□□ -1.33
YPT1YFL038C PAN2P53010 1115 aaPredicted RBP6.74□□□□□ -1.33
YPT1YFL038C PCL10P53124 433 aa6.74□□□□□ -1.33
YPT1YFL038C ADI1Q03677 179 aa6.74□□□□□ -1.33
YPT1YFL038C YML020WQ03722 664 aa6.74□□□□□ -1.33
YPT1YFL038C YLR455WQ06188 304 aa6.74□□□□□ -1.33
YPT1YFL038C YLR053CQ12026 108 aa6.74□□□□□ -1.33
YPT1YFL038C YPR027CQ12079 277 aa6.74□□□□□ -1.33
YPT1YFL038C YRR1Q12172 810 aa6.74□□□□□ -1.33
YPT1YFL038C TY3A-GQ12173 290 aa6.74□□□□□ -1.33
YPT1YFL038C EMP46Q12396 444 aa6.74□□□□□ -1.33
YPT1YFL038C VPS5Q92331 675 aa6.74□□□□□ -1.33
YPT1YFL038C TY3A-IQ99219 290 aa6.74□□□□□ -1.33
YPT1YFL038C CHS1P08004 1131 aa6.73□□□□□ -1.33
YPT1YFL038C VBA3P25594 458 aa6.73□□□□□ -1.33
YPT1YFL038C CDC20P26309 610 aa6.73□□□□□ -1.33
YPT1YFL038C MCM5P29496 775 aaKnown RBP6.73□□□□□ -1.33
YPT1YFL038C SSE1P32589 693 aaKnown RBP6.73□□□□□ -1.33
YPT1YFL038C RGT1P32862 1170 aa6.73□□□□□ -1.33
YPT1YFL038C SWE1P32944 819 aa6.73□□□□□ -1.33
YPT1YFL038C RIM101P33400 625 aa6.73□□□□□ -1.33
YPT1YFL038C VBA5P36172 582 aa6.73□□□□□ -1.33
YPT1YFL038C RFC3P38629 340 aa6.73□□□□□ -1.33
YPT1YFL038C DIA4P38705 446 aaPredicted RBP6.73□□□□□ -1.33
YPT1YFL038C ERP5P38819 212 aa6.73□□□□□ -1.33
YPT1YFL038C PRK1P40494 810 aa6.73□□□□□ -1.33
YPT1YFL038C YIL089WP40500 205 aa6.73□□□□□ -1.33
YPT1YFL038C ISM1P48526 1002 aa6.73□□□□□ -1.33
YPT1YFL038C SCS3P53012 380 aa6.73□□□□□ -1.33
YPT1YFL038C UBX4P54730 416 aa6.73□□□□□ -1.33
YPT1YFL038C UBP2Q01476 1272 aa6.73□□□□□ -1.33
YPT1YFL038C MZM1Q03429 123 aaPredicted RBP6.73□□□□□ -1.33
YPT1YFL038C FMN1Q03778 218 aa6.73□□□□□ -1.33
YPT1YFL038C ARO80Q04052 950 aa6.73□□□□□ -1.33
YPT1YFL038C GTB1Q04924 702 aa6.73□□□□□ -1.33
YPT1YFL038C LCB5Q06147 687 aaKnown RBP6.73□□□□□ -1.33
YPT1YFL038C YET3Q07451 203 aa6.73□□□□□ -1.33
YPT1YFL038C DIS3Q08162 1001 aaKnown RBP6.73□□□□□ -1.33
YPT1YFL038C CUE5Q08412 411 aaKnown RBP6.73□□□□□ -1.33
YPT1YFL038C SPE4Q12455 300 aa6.73□□□□□ -1.33
YPT1YFL038C SEC39Q12745 709 aa6.73□□□□□ -1.33
YPT1YFL038C YDR461C-AQ2V2P7 80 aa6.73□□□□□ -1.33
YPT1YFL038C EXO70P19658 623 aa6.72□□□□□ -1.33
YPT1YFL038C PWP1P21304 576 aaKnown RBP6.72□□□□□ -1.33
YPT1YFL038C BUD14P27637 709 aa6.72□□□□□ -1.33
YPT1YFL038C SRB2P34162 210 aa6.72□□□□□ -1.33
YPT1YFL038C CKB2P38930 258 aa6.72□□□□□ -1.33
YPT1YFL038C LYS9P38999 446 aa6.72□□□□□ -1.33
YPT1YFL038C MXR1P40029 184 aa6.72□□□□□ -1.33
YPT1YFL038C TAH11P47112 604 aa6.72□□□□□ -1.33
YPT1YFL038C YJR054WP47114 497 aa6.72□□□□□ -1.33
YPT1YFL038C YJR142WP47173 342 aa6.72□□□□□ -1.33
YPT1YFL038C BIO4P53630 237 aa6.72□□□□□ -1.33
YPT1YFL038C HOT1Q03213 719 aa6.72□□□□□ -1.33
YPT1YFL038C BUD22Q04347 519 aaKnown RBP6.72□□□□□ -1.33
YPT1YFL038C FMP25Q08023 583 aa6.72□□□□□ -1.33
YPT1YFL038C VPS54Q12071 889 aa6.72□□□□□ -1.33
YPT1YFL038C YLL056CQ12177 298 aa6.72□□□□□ -1.33
YPT1YFL038C PUS1Q12211 544 aaKnown RBP6.72□□□□□ -1.33
YPT1YFL038C SLP1Q12232 587 aa6.72□□□□□ -1.33
YPT1YFL038C NOT5Q12514 560 aaPredicted RBP6.72□□□□□ -1.33
YPT1YFL038C GPA2P10823 449 aa6.71□□□□□ -1.34
YPT1YFL038C POX1P13711 748 aa6.71□□□□□ -1.34
YPT1YFL038C GLN3P18494 730 aa6.71□□□□□ -1.34
YPT1YFL038C TSR4P25040 408 aa6.71□□□□□ -1.34
YPT1YFL038C AAD3P25612 363 aa6.71□□□□□ -1.34
YPT1YFL038C RPC19P28000 142 aaKnown RBP6.71□□□□□ -1.34
YPT1YFL038C MLS1P30952 554 aa6.71□□□□□ -1.34
YPT1YFL038C RPT1P33299 467 aaKnown RBP6.71□□□□□ -1.34
YPT1YFL038C ABZ1P37254 787 aaPredicted RBP6.71□□□□□ -1.34
YPT1YFL038C FLR1P38124 548 aa6.71□□□□□ -1.34
YPT1YFL038C KSP1P38691 1029 aaKnown RBP6.71□□□□□ -1.34
YPT1YFL038C GEM1P39722 662 aa6.71□□□□□ -1.34
YPT1YFL038C DSE1P40077 573 aa6.71□□□□□ -1.34
YPT1YFL038C YIL001WP40560 513 aa6.71□□□□□ -1.34
YPT1YFL038C MND2P40577 368 aa6.71□□□□□ -1.34
YPT1YFL038C ASG7P46993 209 aa6.71□□□□□ -1.34
YPT1YFL038C TPO2P53283 614 aa6.71□□□□□ -1.34
YPT1YFL038C YPR003CP53394 754 aa6.71□□□□□ -1.34
YPT1YFL038C YNL144CP53907 740 aa6.71□□□□□ -1.34
YPT1YFL038C ELP3Q02908 557 aaKnown RBP6.71□□□□□ -1.34
YPT1YFL038C TPO1Q07824 586 aa6.71□□□□□ -1.34
YPT1YFL038C TEF1P02994 458 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C TIF1P10081 395 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C MAS2P11914 482 aa6.7□□□□□ -1.34
YPT1YFL038C AFT1P22149 690 aa6.7□□□□□ -1.34
YPT1YFL038C AMS1P22855 1083 aa6.7□□□□□ -1.34
YPT1YFL038C SAT4P25333 603 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C HEM3P28789 327 aa6.7□□□□□ -1.34
YPT1YFL038C KDX1P36005 433 aa6.7□□□□□ -1.34
YPT1YFL038C APN2P38207 520 aa6.7□□□□□ -1.34
YPT1YFL038C YER186CP40101 306 aa6.7□□□□□ -1.34
YPT1YFL038C ALG5P40350 334 aa6.7□□□□□ -1.34
YPT1YFL038C UBP6P43593 499 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C RFX1P48743 811 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms