RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W COS111P38308 924 aa4.48□□□□□ -1.69
LSM4YER112W SRP68P38687 599 aaKnown RBP4.48□□□□□ -1.69
LSM4YER112W YIL077CP40508 320 aa4.48□□□□□ -1.69
LSM4YER112W HOL1P53389 586 aa4.48□□□□□ -1.69
LSM4YER112W SMX3P54999 86 aaPredicted RBP4.48□□□□□ -1.69
LSM4YER112W PLC1P32383 869 aa4.47□□□□□ -1.69
LSM4YER112W HXT4P32467 576 aa4.47□□□□□ -1.69
LSM4YER112W SER1P33330 395 aaKnown RBP4.47□□□□□ -1.69
LSM4YER112W NDC80P40460 691 aa4.47□□□□□ -1.69
LSM4YER112W HLR1Q04429 423 aa4.47□□□□□ -1.69
LSM4YER112W PHM6Q05637 104 aa4.47□□□□□ -1.69
LSM4YER112W YFT2Q06676 274 aa4.47□□□□□ -1.69
LSM4YER112W THR1P17423 357 aaKnown RBP4.46□□□□□ -1.7
LSM4YER112W PRE4P30657 266 aa4.46□□□□□ -1.7
LSM4YER112W HEM12P32347 362 aaPredicted RBP4.46□□□□□ -1.7
LSM4YER112W GRX7P38068 203 aa4.46□□□□□ -1.7
LSM4YER112W YHR033WP38690 423 aa4.46□□□□□ -1.7
LSM4YER112W MPS3P47069 682 aa4.46□□□□□ -1.7
LSM4YER112W RFX1P48743 811 aa4.46□□□□□ -1.7
LSM4YER112W ATG4P53867 494 aa4.46□□□□□ -1.7
LSM4YER112W FDC1Q03034 503 aa4.46□□□□□ -1.7
LSM4YER112W YAP7Q08182 245 aa4.46□□□□□ -1.7
LSM4YER112W AIM41Q12032 185 aa4.46□□□□□ -1.7
LSM4YER112W USV1Q12132 391 aa4.46□□□□□ -1.7
LSM4YER112W CTP1P38152 299 aa4.45□□□□□ -1.7
LSM4YER112W ENP1P38333 483 aaKnown RBP4.45□□□□□ -1.7
LSM4YER112W PRM2P40534 656 aa4.45□□□□□ -1.7
LSM4YER112W SQS1P53866 767 aaKnown RBP4.45□□□□□ -1.7
LSM4YER112W RGC1Q06108 1083 aaKnown RBP4.45□□□□□ -1.7
LSM4YER112W YSH1Q06224 779 aaPredicted RBP4.45□□□□□ -1.7
LSM4YER112W NGL1Q08213 363 aaKnown RBP4.45□□□□□ -1.7
LSM4YER112W MLH3Q12083 715 aa4.45□□□□□ -1.7
LSM4YER112W TMA7Q3E764 64 aaKnown RBP4.45□□□□□ -1.7
LSM4YER112W TUF1P02992 437 aaKnown RBP4.44□□□□□ -1.7
LSM4YER112W TMT1P32643 299 aa4.44□□□□□ -1.7
LSM4YER112W BDH2P39713 417 aa4.44□□□□□ -1.7
LSM4YER112W CTR1P49573 406 aa4.44□□□□□ -1.7
LSM4YER112W APM1Q00776 475 aaPredicted RBP4.44□□□□□ -1.7
LSM4YER112W THI7Q05998 598 aa4.44□□□□□ -1.7
LSM4YER112W YDL086WQ07505 273 aa4.44□□□□□ -1.7
LSM4YER112W VPS5Q92331 675 aa4.44□□□□□ -1.7
LSM4YER112W YEL076C-AP0CX16 216 aa4.43□□□□□ -1.7
LSM4YER112W YLR464WP0CX17 216 aa4.43□□□□□ -1.7
LSM4YER112W HMG2P12684 1045 aa4.43□□□□□ -1.7
LSM4YER112W ATP12P22135 325 aa4.43□□□□□ -1.7
LSM4YER112W FUB1P25659 250 aa4.43□□□□□ -1.7
LSM4YER112W GLG1P36143 616 aa4.43□□□□□ -1.7
LSM4YER112W APL3P38065 1025 aa4.43□□□□□ -1.7
LSM4YER112W YJL206CP39529 758 aa4.43□□□□□ -1.7
LSM4YER112W YEL076CP39971 216 aa4.43□□□□□ -1.7
LSM4YER112W IRC5P43610 853 aa4.43□□□□□ -1.7
LSM4YER112W YGR151CP53287 111 aa4.43□□□□□ -1.7
LSM4YER112W MTD1Q02046 320 aaKnown RBP4.43□□□□□ -1.7
LSM4YER112W YCG1Q06680 1035 aa4.43□□□□□ -1.7
LSM4YER112W BMS1Q08965 1183 aaKnown RBP4.43□□□□□ -1.7
LSM4YER112W SLX4Q12098 748 aa4.43□□□□□ -1.7
LSM4YER112W TAF3Q12297 353 aa4.43□□□□□ -1.7
LSM4YER112W SSP120P39931 234 aaKnown RBP4.42□□□□□ -1.7
LSM4YER112W KHA1P40309 873 aa4.42□□□□□ -1.7
LSM4YER112W PEF1P53238 335 aa4.42□□□□□ -1.7
LSM4YER112W PEX8P53248 589 aa4.42□□□□□ -1.7
LSM4YER112W CEF1Q03654 590 aaPredicted RBP4.42□□□□□ -1.7
LSM4YER112W ECM38Q05902 660 aaPredicted RBP4.42□□□□□ -1.7
LSM4YER112W CWC2Q12046 339 aaPredicted RBP4.42□□□□□ -1.7
LSM4YER112W PSF3Q12146 194 aa4.42□□□□□ -1.7
LSM4YER112W RPN13O13563 156 aa4.41□□□□□ -1.7
LSM4YER112W SET3P36124 751 aa4.41□□□□□ -1.7
LSM4YER112W GMH1P36125 273 aa4.41□□□□□ -1.7
LSM4YER112W CRG1P38892 291 aaRIP-Chip data4.41□□□□□ -1.7not detected
LSM4YER112W STL1P39932 569 aa4.41□□□□□ -1.7
LSM4YER112W FTR1P40088 404 aa4.41□□□□□ -1.7
LSM4YER112W SEC5P89102 971 aa4.41□□□□□ -1.7
LSM4YER112W SND1Q04007 877 aa4.41□□□□□ -1.7
LSM4YER112W IZH3Q07959 543 aa4.41□□□□□ -1.7
LSM4YER112W TUP1P16649 713 aa4.4□□□□□ -1.71
LSM4YER112W SPO11P23179 398 aa4.4□□□□□ -1.71
LSM4YER112W KCC4P25389 1037 aa4.4□□□□□ -1.71
LSM4YER112W MSS1P32559 526 aaPredicted RBP4.4□□□□□ -1.71
LSM4YER112W MTC7P32633 139 aa4.4□□□□□ -1.71
LSM4YER112W DHR2P36009 735 aaPredicted RBP4.4□□□□□ -1.71
LSM4YER112W SAW1P39735 261 aa4.4□□□□□ -1.71
LSM4YER112W YEL025CP39991 1188 aa4.4□□□□□ -1.71
LSM4YER112W TMN3P40071 706 aa4.4□□□□□ -1.71
LSM4YER112W NOP2P40991 618 aaKnown RBP4.4□□□□□ -1.71
LSM4YER112W GLO1P50107 326 aa4.4□□□□□ -1.71
LSM4YER112W MDR1P53258 950 aa4.4□□□□□ -1.71
LSM4YER112W YNL034WP53963 612 aa4.4□□□□□ -1.71
LSM4YER112W YNL018CP53976 612 aa4.4□□□□□ -1.71
LSM4YER112W DAK1P54838 584 aaKnown RBP4.4□□□□□ -1.71
LSM4YER112W IOC4Q04213 475 aa4.4□□□□□ -1.71
LSM4YER112W UFO1Q04511 668 aa4.4□□□□□ -1.71
LSM4YER112W RKI1Q12189 258 aa4.4□□□□□ -1.71
LSM4YER112W SEC12P11655 471 aa4.39□□□□□ -1.71
LSM4YER112W CWH43P25618 953 aa4.39□□□□□ -1.71
LSM4YER112W NIC96P34077 839 aa4.39□□□□□ -1.71
LSM4YER112W SDS22P36047 338 aa4.39□□□□□ -1.71
LSM4YER112W TAF5P38129 798 aa4.39□□□□□ -1.71
LSM4YER112W KSP1P38691 1029 aaKnown RBP4.39□□□□□ -1.71
LSM4YER112W EAF5P39995 279 aa4.39□□□□□ -1.71
LSM4YER112W THI6P41835 540 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms