RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	FOB1	O13329	566 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	LEU2	P04173	364 aa	Predicted RBP	5.71	□□□□□ -1.5
SNM1	YDR478W	RPS9B	P05755	195 aa	Known RBP	5.71	□□□□□ -1.5
SNM1	YDR478W	TUB3	P09734	445 aa	Known RBP	5.71	□□□□□ -1.5
SNM1	YDR478W	PCK1	P10963	549 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	SEC21	P32074	935 aa	Known RBP	5.71	□□□□□ -1.5
SNM1	YDR478W	ETP1	P38748	585 aa	Known RBP	5.71	□□□□□ -1.5
SNM1	YDR478W	ESL1	P40456	1118 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	SNO2	P53823	222 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	HMO1	Q03973	246 aa	Known RBP	5.71	□□□□□ -1.5
SNM1	YDR478W	ARA2	Q04212	335 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	VPS36	Q06696	566 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	DIN7	Q12086	430 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	ATG11	Q12527	1178 aa		5.71	□□□□□ -1.5
SNM1	YDR478W	SNF1	P06782	633 aa	Known RBP	5.7	□□□□□ -1.5
SNM1	YDR478W	HMG2	P12684	1045 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
SNM1	YDR478W	SEC15	P22224	910 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	KIN82	P25341	720 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	PAH1	P32567	862 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	NPR3	P38742	1146 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	MSS4	P38994	779 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	VPS8	P39702	1274 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	BIT61	P47041	543 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	GCV2	P49095	1034 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	NCS6	P53088	359 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	ROT1	Q03691	256 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	GAD1	Q04792	585 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	PEX19	Q07418	342 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	CRD1	Q07560	283 aa		5.7	□□□□□ -1.5
SNM1	YDR478W	MRP7	P12687	371 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	GUK1	P15454	187 aa	Known RBP	5.69	□□□□□ -1.5
SNM1	YDR478W	PRP4	P20053	465 aa	Known RBP	5.69	□□□□□ -1.5
SNM1	YDR478W	RNR1	P21524	888 aa	Known RBP	5.69	□□□□□ -1.5
SNM1	YDR478W	SAN1	P22470	610 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	YHR112C	P38716	378 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	AXL2	P38928	823 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	NOP16	P40007	231 aa	Known RBP	5.69	□□□□□ -1.5
SNM1	YDR478W	YNL195C	P40168	261 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	PRM2	P40534	656 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	BNA1	P47096	177 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	CTF18	P49956	741 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	NRG1	Q03125	231 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	AAD4	Q07747	329 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	HMI1	Q12039	706 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	NPC2	Q12408	173 aa		5.69	□□□□□ -1.5
SNM1	YDR478W	URA3	P03962	267 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	RIT1	P23796	513 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	PRE4	P30657	266 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	TEF4	P36008	412 aa	Known RBP	5.68	□□□□□ -1.5
SNM1	YDR478W	MUD2	P36084	527 aa	Known RBP	5.68	□□□□□ -1.5
SNM1	YDR478W	RPP1	P38786	293 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	YER010C	P40011	234 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	TAH11	P47112	604 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	GSF2	Q04697	403 aa	Known RBP	5.68	□□□□□ -1.5
SNM1	YDR478W	NOP12	Q08208	459 aa	Known RBP	5.68	□□□□□ -1.5
SNM1	YDR478W	SDH5	Q08230	162 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	DIA2	Q08496	732 aa	Predicted RBP	5.68	□□□□□ -1.5
SNM1	YDR478W	GPB1	Q08886	897 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	AIM41	Q12032	185 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	POM34	Q12445	299 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	TRM11	Q12463	433 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	ECM3	Q99252	613 aa		5.68	□□□□□ -1.5
SNM1	YDR478W	TUF1	P02992	437 aa	Known RBP	5.67	□□□□□ -1.5
SNM1	YDR478W	AAC3	P18238	307 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	ARG1	P22768	420 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	EMC1	P25574	760 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	NFU1	P32860	256 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	IFA38	P38286	347 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	YEL068C	P39977	110 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	CAB2	P40506	365 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	CHA4	P43634	648 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	CBK1	P53894	756 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	PLB2	Q03674	706 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	RXT3	Q07458	294 aa		5.67	□□□□□ -1.5
SNM1	YDR478W	BET2	P20133	325 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	MTC7	P32633	139 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	YPT7	P32939	208 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	CNS1	P33313	385 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	YBR138C	P38277	524 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	FSH1	P38777	243 aa	Known RBP	5.66	□□□□□ -1.5
SNM1	YDR478W	DPH1	P40487	425 aa	Known RBP	5.66	□□□□□ -1.5
SNM1	YDR478W	GSM1	P42950	618 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	NOP9	P47077	666 aa	Known RBP	5.66	□□□□□ -1.5
SNM1	YDR478W	IMA1	P53051	589 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	VPS62	P53285	467 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	CTK1	Q03957	528 aa	Known RBP	5.66	□□□□□ -1.5
SNM1	YDR478W	YCG1	Q06680	1035 aa		5.66	□□□□□ -1.5
SNM1	YDR478W	ADE3	P07245	946 aa	Known RBP	5.65	□□□□□ -1.5
SNM1	YDR478W	SWI4	P25302	1093 aa	Known RBP	5.65	□□□□□ -1.5
SNM1	YDR478W	FRD1	P32614	470 aa	Known RBP	5.65	□□□□□ -1.5
SNM1	YDR478W	RMA1	P36001	430 aa	Known RBP	5.65	□□□□□ -1.5
SNM1	YDR478W	RIC1	P40395	1056 aa		5.65	□□□□□ -1.5
SNM1	YDR478W	VTC2	P43585	828 aa		5.65	□□□□□ -1.5
SNM1	YDR478W	UPF3	P48412	387 aa	Known RBP	5.65	□□□□□ -1.5
SNM1	YDR478W	YAP6	Q03935	383 aa		5.65	□□□□□ -1.5
SNM1	YDR478W	TFC6	Q06339	672 aa		5.65	□□□□□ -1.5
SNM1	YDR478W	IMH1	Q06704	911 aa	Known RBP	5.65	□□□□□ -1.5
SNM1	YDR478W	TRM8	Q12009	286 aa		5.65	□□□□□ -1.5
SNM1	YDR478W	SEM1	O94742	89 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms