RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W PET10P36139 283 aa1.12□□□□□ -2.23
SCC2YDR180W TFA2P36145 328 aa1.12□□□□□ -2.23
SCC2YDR180W SPP381P38282 291 aaPredicted RBP1.12□□□□□ -2.23
SCC2YDR180W IFA38P38286 347 aa1.12□□□□□ -2.23
SCC2YDR180W RIM4P38741 713 aa1.12□□□□□ -2.23
SCC2YDR180W NEM1P38757 446 aa1.12□□□□□ -2.23
SCC2YDR180W MPT5P39016 859 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SCC2YDR180W TOK1P40310 691 aa1.12□□□□□ -2.23
SCC2YDR180W IES1P43579 692 aa1.12□□□□□ -2.23
SCC2YDR180W TMA22P47089 198 aaPredicted RBP1.12□□□□□ -2.23
SCC2YDR180W YPT11P48559 417 aa1.12□□□□□ -2.23
SCC2YDR180W PIB2P53191 635 aa1.12□□□□□ -2.23
SCC2YDR180W YGR054WP53235 642 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W ALF1P53904 254 aa1.12□□□□□ -2.23
SCC2YDR180W RNT1Q02555 471 aa1.12□□□□□ -2.23
SCC2YDR180W YML082WQ04533 649 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W HBT1Q07653 1046 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W MLH2Q07980 695 aa1.12□□□□□ -2.23
SCC2YDR180W YOR012WQ12351 137 aa1.12□□□□□ -2.23
SCC2YDR180W PTC5Q12511 572 aa1.12□□□□□ -2.23
SCC2YDR180W Q0142Q9ZZW4 58 aa1.12□□□□□ -2.23
SCC2YDR180W TY4B-PA0A0B7P3V8 1104 aa1.12□□□□□ -2.23
SCC2YDR180W YER152CP10356 443 aa1.12□□□□□ -2.23
SCC2YDR180W HCA4P20448 770 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W VPS1P21576 704 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W DBP2P24783 546 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W CLB1P24868 471 aa1.12□□□□□ -2.23
SCC2YDR180W RDS1P25611 832 aa1.12□□□□□ -2.23
SCC2YDR180W BRF1P29056 596 aa1.12□□□□□ -2.23
SCC2YDR180W NUF2P33895 451 aa1.12□□□□□ -2.23
SCC2YDR180W AST1P35183 429 aa1.12□□□□□ -2.23
SCC2YDR180W YKR018CP36114 725 aa1.12□□□□□ -2.23
SCC2YDR180W ECM4P36156 370 aa1.12□□□□□ -2.23
SCC2YDR180W MAL31P38156 614 aa1.12□□□□□ -2.23
SCC2YDR180W YBR053CP38235 358 aa1.12□□□□□ -2.23
SCC2YDR180W HSM3P38348 480 aa1.12□□□□□ -2.23
SCC2YDR180W TDA11P38854 504 aa1.12□□□□□ -2.23
SCC2YDR180W SCS2P40075 244 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W AAD14P42884 376 aa1.12□□□□□ -2.23
SCC2YDR180W CNN1P43618 361 aa1.12□□□□□ -2.23
SCC2YDR180W ROK1P45818 564 aaPredicted RBP1.12□□□□□ -2.23
SCC2YDR180W MET12P46151 657 aa1.12□□□□□ -2.23
SCC2YDR180W YGR153WP48238 217 aa1.12□□□□□ -2.23
SCC2YDR180W ALT1P52893 592 aa1.12□□□□□ -2.23
SCC2YDR180W MSN5P52918 1224 aa1.12□□□□□ -2.23
SCC2YDR180W ADA2Q02336 434 aa1.12□□□□□ -2.23
SCC2YDR180W YDR131CQ03899 556 aa1.12□□□□□ -2.23
SCC2YDR180W PHM6Q05637 104 aa1.12□□□□□ -2.23
SCC2YDR180W CRR1Q05790 422 aa1.12□□□□□ -2.23
SCC2YDR180W RSA3Q05942 220 aaKnown RBP1.12□□□□□ -2.23
SCC2YDR180W RSC3Q06639 885 aa1.12□□□□□ -2.23
SCC2YDR180W NSE1Q07913 336 aa1.12□□□□□ -2.23
SCC2YDR180W PSK2Q08217 1101 aa1.12□□□□□ -2.23
SCC2YDR180W YDR056CQ12025 205 aa1.12□□□□□ -2.23
SCC2YDR180W FOB1O13329 566 aa1.11□□□□□ -2.23
SCC2YDR180W RPS21AP0C0V8 87 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W CLN3P13365 580 aa1.11□□□□□ -2.23
SCC2YDR180W IDI1P15496 288 aa1.11□□□□□ -2.23
SCC2YDR180W AEP2P22136 580 aa1.11□□□□□ -2.23
SCC2YDR180W SEC65P29478 273 aa1.11□□□□□ -2.23
SCC2YDR180W MGM1P32266 881 aa1.11□□□□□ -2.23
SCC2YDR180W SLA1P32790 1244 aa1.11□□□□□ -2.23
SCC2YDR180W YKU70P32807 602 aa1.11□□□□□ -2.23
SCC2YDR180W RIB7P33312 244 aa1.11□□□□□ -2.23
SCC2YDR180W ASH1P34233 588 aa1.11□□□□□ -2.23
SCC2YDR180W YKL133CP36066 463 aa1.11□□□□□ -2.23
SCC2YDR180W NCL1P38205 684 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W MUM2P38236 366 aa1.11□□□□□ -2.23
SCC2YDR180W TOS1P38288 455 aa1.11□□□□□ -2.23
SCC2YDR180W RIM11P38615 370 aa1.11□□□□□ -2.23
SCC2YDR180W YHL041WP38730 149 aa1.11□□□□□ -2.23
SCC2YDR180W SMX2P40204 77 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W YJR124CP47159 448 aa1.11□□□□□ -2.23
SCC2YDR180W YNR065CP53751 1116 aa1.11□□□□□ -2.23
SCC2YDR180W YKR005CQ02203 525 aa1.11□□□□□ -2.23
SCC2YDR180W SMP3Q04174 516 aa1.11□□□□□ -2.23
SCC2YDR180W RRB1Q04225 511 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W SNU66Q12420 587 aaPredicted RBP1.11□□□□□ -2.23
SCC2YDR180W MDM12Q92328 271 aa1.11□□□□□ -2.23
SCC2YDR180W BI4P03879 638 aa1.11□□□□□ -2.23
SCC2YDR180W ATP4P05626 244 aa1.11□□□□□ -2.23
SCC2YDR180W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
SCC2YDR180W ARG82P07250 355 aa1.11□□□□□ -2.23
SCC2YDR180W RGP1P16664 663 aa1.11□□□□□ -2.23
SCC2YDR180W COX11P19516 300 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W RSA4P25382 515 aaKnown RBP1.11□□□□□ -2.23
SCC2YDR180W MCM10P32354 571 aa1.11□□□□□ -2.23
SCC2YDR180W SLA2P33338 968 aa1.11□□□□□ -2.23
SCC2YDR180W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
SCC2YDR180W BLI1P35727 113 aa1.11□□□□□ -2.23
SCC2YDR180W ADD66P36040 267 aa1.11□□□□□ -2.23
SCC2YDR180W DID4P36108 232 aa1.11□□□□□ -2.23
SCC2YDR180W SET3P36124 751 aa1.11□□□□□ -2.23
SCC2YDR180W KAE1P36132 386 aa1.11□□□□□ -2.23
SCC2YDR180W ESL2P36168 1195 aa1.11□□□□□ -2.23
SCC2YDR180W MRX3P38172 270 aa1.11□□□□□ -2.23
SCC2YDR180W YBR062CP38239 180 aa1.11□□□□□ -2.23
SCC2YDR180W UBS1P38290 277 aa1.11□□□□□ -2.23
SCC2YDR180W PRE3P38624 215 aa1.11□□□□□ -2.23
SCC2YDR180W MMS21P38632 267 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms