RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W GUD1Q07729 489 aa3.03□□□□□ -1.92
VPS41YDR080W ISA1Q07821 250 aaPredicted RBP3.03□□□□□ -1.92
VPS41YDR080W TRM11Q12463 433 aa3.03□□□□□ -1.92
VPS41YDR080W PHR1P05066 565 aaKnown RBP RIP-Chip data3.03□□□□□ -1.93not detected
VPS41YDR080W RPP0P05317 312 aaKnown RBP3.03□□□□□ -1.93
VPS41YDR080W POT1P27796 417 aaKnown RBP RIP-Chip data3.03□□□□□ -1.93not detected
VPS41YDR080W PFA3P42836 336 aa3.03□□□□□ -1.93
VPS41YDR080W SKP2P42843 763 aa3.03□□□□□ -1.93
VPS41YDR080W DAK1P54838 584 aaKnown RBP3.03□□□□□ -1.93
VPS41YDR080W AIM39Q08223 395 aa3.03□□□□□ -1.93
VPS41YDR080W RTP1Q12751 981 aa3.03□□□□□ -1.93
VPS41YDR080W POX1P13711 748 aa3.02□□□□□ -1.93
VPS41YDR080W PRE8P23639 250 aa3.02□□□□□ -1.93
VPS41YDR080W SUL1P38359 859 aa3.02□□□□□ -1.93
VPS41YDR080W NNF1P47149 201 aa3.02□□□□□ -1.93
VPS41YDR080W NOG2P53742 486 aaKnown RBP3.02□□□□□ -1.93
VPS41YDR080W FKS1P38631 1876 aaKnown RBP3.02□□□□□ -1.93
VPS41YDR080W TOM1Q03280 3268 aa3.02□□□□□ -1.93
VPS41YDR080W HIP1P06775 603 aa3.02□□□□□ -1.93
VPS41YDR080W SEC18P18759 758 aaKnown RBP3.02□□□□□ -1.93
VPS41YDR080W RAD24P32641 659 aa3.02□□□□□ -1.93
VPS41YDR080W RPT3P33298 428 aaKnown RBP3.02□□□□□ -1.93
VPS41YDR080W MTC2P34246 357 aa3.02□□□□□ -1.93
VPS41YDR080W STB5P38699 743 aa3.02□□□□□ -1.93
VPS41YDR080W RSC3Q06639 885 aa3.02□□□□□ -1.93
VPS41YDR080W KEL3Q08979 651 aaPredicted RBP3.02□□□□□ -1.93
VPS41YDR080W SWI6P09959 803 aa3.01□□□□□ -1.93
VPS41YDR080W MCM4P30665 933 aaKnown RBP3.01□□□□□ -1.93
VPS41YDR080W SSY5P47002 699 aa3.01□□□□□ -1.93
VPS41YDR080W RRI2Q12348 645 aa3.01□□□□□ -1.93
VPS41YDR080W RPS19AP07280 144 aaKnown RBP3.01□□□□□ -1.93
VPS41YDR080W RPS19BP07281 144 aaPredicted RBP3.01□□□□□ -1.93
VPS41YDR080W CIT2P08679 460 aa3.01□□□□□ -1.93
VPS41YDR080W FUB1P25659 250 aa3.01□□□□□ -1.93
VPS41YDR080W UTR4P32626 227 aa3.01□□□□□ -1.93
VPS41YDR080W TGL1P34163 548 aa3.01□□□□□ -1.93
VPS41YDR080W KTR4P38131 464 aa3.01□□□□□ -1.93
VPS41YDR080W SAK1P38990 1142 aa3.01□□□□□ -1.93
VPS41YDR080W VID30P53076 958 aa3.01□□□□□ -1.93
VPS41YDR080W YMR206WQ03695 313 aa3.01□□□□□ -1.93
VPS41YDR080W RPS9AO13516 197 aaKnown RBP3□□□□□ -1.93
VPS41YDR080W PPR1P07272 904 aaPredicted RBP3□□□□□ -1.93
VPS41YDR080W ALG7P07286 448 aa3□□□□□ -1.93
VPS41YDR080W TFC4P33339 1025 aa3□□□□□ -1.93
VPS41YDR080W FKH2P41813 862 aa3□□□□□ -1.93
VPS41YDR080W STB4P50104 949 aa3□□□□□ -1.93
VPS41YDR080W YNL034WP53963 612 aa3□□□□□ -1.93
VPS41YDR080W YNL018CP53976 612 aa3□□□□□ -1.93
VPS41YDR080W SWM1Q12379 170 aa3□□□□□ -1.93
VPS41YDR080W MDM12Q92328 271 aa3□□□□□ -1.93
VPS41YDR080W PPS1P38148 807 aa3□□□□□ -1.93
VPS41YDR080W ELO3P40319 345 aa3□□□□□ -1.93
VPS41YDR080W HOS4P40480 1083 aa3□□□□□ -1.93
VPS41YDR080W YIR042CP40586 236 aa3□□□□□ -1.93
VPS41YDR080W JSN1P47135 1091 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
VPS41YDR080W HSV2P50079 448 aaPredicted RBP3□□□□□ -1.93
VPS41YDR080W MET13P53128 600 aa3□□□□□ -1.93
VPS41YDR080W DAM1P53267 343 aa3□□□□□ -1.93
VPS41YDR080W RNT1Q02555 471 aa3□□□□□ -1.93
VPS41YDR080W SPH1Q06160 661 aa3□□□□□ -1.93
VPS41YDR080W MMR1Q06324 491 aa3□□□□□ -1.93
VPS41YDR080W FRE5Q08908 694 aa3□□□□□ -1.93
VPS41YDR080W TAD3Q9URQ3 322 aa3□□□□□ -1.93
VPS41YDR080W TY1B-AO13527 1196 aaKnown RBP3□□□□□ -1.93
VPS41YDR080W PRC1P00729 532 aa3□□□□□ -1.93
VPS41YDR080W CDC9P04819 755 aa3□□□□□ -1.93
VPS41YDR080W SRP40P32583 406 aaPredicted RBP3□□□□□ -1.93
VPS41YDR080W OAR1P35731 278 aa3□□□□□ -1.93
VPS41YDR080W RLP7P40693 322 aaKnown RBP3□□□□□ -1.93
VPS41YDR080W ZIP2P53061 704 aa3□□□□□ -1.93
VPS41YDR080W TMN2Q04562 672 aa3□□□□□ -1.93
VPS41YDR080W ERP3Q12403 225 aa3□□□□□ -1.93
VPS41YDR080W MYO1P08964 1928 aa2.99□□□□□ -1.93
VPS41YDR080W RAD18P10862 487 aa2.99□□□□□ -1.93
VPS41YDR080W GAL11P19659 1081 aa2.99□□□□□ -1.93
VPS41YDR080W GCD7P32502 381 aaPredicted RBP2.99□□□□□ -1.93
VPS41YDR080W UBS1P38290 277 aa2.99□□□□□ -1.93
VPS41YDR080W SIC1P38634 284 aa2.99□□□□□ -1.93
VPS41YDR080W NIT3P49954 291 aa2.99□□□□□ -1.93
VPS41YDR080W MUP1P50276 574 aa2.99□□□□□ -1.93
VPS41YDR080W VPS30Q02948 557 aa2.99□□□□□ -1.93
VPS41YDR080W TGL5Q12043 749 aa2.99□□□□□ -1.93
VPS41YDR080W YLR149CQ99296 730 aa2.99□□□□□ -1.93
VPS41YDR080W Q0142Q9ZZW4 58 aa2.99□□□□□ -1.93
VPS41YDR080W YUR1P26725 428 aa2.99□□□□□ -1.93
VPS41YDR080W YJL163CP46996 555 aa2.99□□□□□ -1.93
VPS41YDR080W ADY4Q05955 493 aa2.99□□□□□ -1.93
VPS41YDR080W YLR415CO13578 112 aa2.98□□□□□ -1.93
VPS41YDR080W NUP82P40368 713 aa2.98□□□□□ -1.93
VPS41YDR080W CLF1Q12309 687 aaPredicted RBP2.98□□□□□ -1.93
VPS41YDR080W RAD61Q99359 647 aa2.98□□□□□ -1.93
VPS41YDR080W BUD2P33314 1104 aa2.98□□□□□ -1.93
VPS41YDR080W MCR1P36060 302 aaKnown RBP2.98□□□□□ -1.93
VPS41YDR080W DBP7P36120 742 aaKnown RBP2.98□□□□□ -1.93
VPS41YDR080W GRX7P38068 203 aa2.98□□□□□ -1.93
VPS41YDR080W SET5P38890 526 aaKnown RBP2.98□□□□□ -1.93
VPS41YDR080W PUS2P53167 370 aa2.98□□□□□ -1.93
VPS41YDR080W YNL193WP53870 558 aa2.98□□□□□ -1.93
VPS41YDR080W ARP4P80428 489 aa2.98□□□□□ -1.93
VPS41YDR080W YPR117WQ06116 2489 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms