RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W PAN5P38787 379 aa2.44□□□□□ -2.02
UBP1YDL122W PMC1P38929 1173 aaPredicted RBP2.44□□□□□ -2.02
UBP1YDL122W PSY2P40164 858 aa2.44□□□□□ -2.02
UBP1YDL122W QDR2P40474 542 aa2.44□□□□□ -2.02
UBP1YDL122W DSN1P40568 576 aa2.44□□□□□ -2.02
UBP1YDL122W EST2Q06163 884 aa2.44□□□□□ -2.02
UBP1YDL122W YDL057WQ07379 328 aa2.44□□□□□ -2.02
UBP1YDL122W SPO75Q07798 868 aa2.44□□□□□ -2.02
UBP1YDL122W RTT10Q08924 1013 aa2.44□□□□□ -2.02
UBP1YDL122W NOP14Q99207 810 aaKnown RBP2.44□□□□□ -2.02
UBP1YDL122W FLP1P03870 423 aa2.44□□□□□ -2.02
UBP1YDL122W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02 RIP-Chip
UBP1YDL122W RPL1AP0CX43 217 aaKnown RBP2.44□□□□□ -2.02
UBP1YDL122W RPL1BP0CX44 217 aaKnown RBP2.44□□□□□ -2.02
UBP1YDL122W BAS1P22035 811 aa2.44□□□□□ -2.02
UBP1YDL122W ATG15P25641 520 aa2.44□□□□□ -2.02
UBP1YDL122W MCM5P29496 775 aaKnown RBP2.44□□□□□ -2.02
UBP1YDL122W RAD16P31244 790 aa2.44□□□□□ -2.02
UBP1YDL122W SWC3P31376 625 aa2.44□□□□□ -2.02
UBP1YDL122W TMT1P32643 299 aa2.44□□□□□ -2.02
UBP1YDL122W SKG6P32900 734 aaPredicted RBP2.44□□□□□ -2.02
UBP1YDL122W ATG12P38316 186 aa2.44□□□□□ -2.02
UBP1YDL122W PFS1P38872 237 aa2.44□□□□□ -2.02
UBP1YDL122W EAF5P39995 279 aa2.44□□□□□ -2.02
UBP1YDL122W RGD2P43556 714 aa2.44□□□□□ -2.02
UBP1YDL122W FLC3P53121 802 aa2.44□□□□□ -2.02
UBP1YDL122W BUD9P53226 547 aa2.44□□□□□ -2.02
UBP1YDL122W TPO2P53283 614 aa2.44□□□□□ -2.02
UBP1YDL122W YNR040WP53736 256 aa2.44□□□□□ -2.02
UBP1YDL122W ADI1Q03677 179 aa2.44□□□□□ -2.02
UBP1YDL122W ADY4Q05955 493 aa2.44□□□□□ -2.02
UBP1YDL122W SUE1Q06524 206 aa2.44□□□□□ -2.02
UBP1YDL122W BSP1Q06604 576 aa2.44□□□□□ -2.02
UBP1YDL122W RTT109Q07794 436 aa2.44□□□□□ -2.02
UBP1YDL122W TAH18Q12181 623 aa2.44□□□□□ -2.02
UBP1YDL122W SLP1Q12232 587 aa2.44□□□□□ -2.02
UBP1YDL122W NCB2Q92317 146 aa2.44□□□□□ -2.02
UBP1YDL122W GCR1P07261 785 aa2.43□□□□□ -2.02
UBP1YDL122W ERR1P0CX10 437 aa2.43□□□□□ -2.02
UBP1YDL122W ERR2P0CX11 437 aa2.43□□□□□ -2.02
UBP1YDL122W RPL8AP17076 256 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W MSN1P22148 382 aa2.43□□□□□ -2.02
UBP1YDL122W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
UBP1YDL122W MUM2P38236 366 aa2.43□□□□□ -2.02
UBP1YDL122W ECM2P38241 364 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W YBR184WP38299 523 aa2.43□□□□□ -2.02
UBP1YDL122W SIP5P40210 489 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W LTP1P40347 161 aa2.43□□□□□ -2.02
UBP1YDL122W KRI1P42846 591 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W SAD1P43589 448 aa2.43□□□□□ -2.02
UBP1YDL122W SEG1Q04279 960 aa2.43□□□□□ -2.02
UBP1YDL122W CDA1Q06702 301 aa2.43□□□□□ -2.02
UBP1YDL122W YOR296WQ08748 1289 aa2.43□□□□□ -2.02
UBP1YDL122W TMA46Q12000 345 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
UBP1YDL122W REC8Q12188 680 aa2.43□□□□□ -2.02
UBP1YDL122W PGA3Q12746 312 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W CTF3Q12748 733 aa2.43□□□□□ -2.02
UBP1YDL122W IRA1P18963 3092 aa2.43□□□□□ -2.02
UBP1YDL122W GAL80P04387 435 aa2.43□□□□□ -2.02
UBP1YDL122W HSP60P19882 572 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W MRC1P25588 1096 aa2.43□□□□□ -2.02
UBP1YDL122W TSA1P34760 196 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W ISW1P38144 1129 aa2.43□□□□□ -2.02
UBP1YDL122W MRX3P38172 270 aa2.43□□□□□ -2.02
UBP1YDL122W PIC2P40035 300 aa2.43□□□□□ -2.02
UBP1YDL122W FAU1P40099 211 aa2.43□□□□□ -2.02
UBP1YDL122W FYV8P46949 817 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W PRY1P47032 299 aa2.43□□□□□ -2.02
UBP1YDL122W MNN10P50108 393 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W SWS2P53937 143 aa2.43□□□□□ -2.02
UBP1YDL122W RPS15Q01855 142 aaKnown RBP2.43□□□□□ -2.02
UBP1YDL122W YPL014WQ02606 381 aa2.43□□□□□ -2.02
UBP1YDL122W NUP116Q02630 1113 aa2.43□□□□□ -2.02
UBP1YDL122W CRD1Q07560 283 aa2.43□□□□□ -2.02
UBP1YDL122W MCA1Q08601 432 aa2.43□□□□□ -2.02
UBP1YDL122W TAF10Q12030 206 aa2.43□□□□□ -2.02
UBP1YDL122W TMS1Q12116 473 aa2.43□□□□□ -2.02
UBP1YDL122W AI3P03877 415 aa2.42□□□□□ -2.02
UBP1YDL122W SFA1P32771 386 aa2.42□□□□□ -2.02
UBP1YDL122W SEC6P32844 805 aa2.42□□□□□ -2.02
UBP1YDL122W YER186CP40101 306 aa2.42□□□□□ -2.02
UBP1YDL122W NPA3P47122 385 aa2.42□□□□□ -2.02
UBP1YDL122W MON1P53129 644 aa2.42□□□□□ -2.02
UBP1YDL122W COQ6P53318 479 aa2.42□□□□□ -2.02
UBP1YDL122W SPC98P53540 846 aa2.42□□□□□ -2.02
UBP1YDL122W SUN4P53616 420 aa2.42□□□□□ -2.02
UBP1YDL122W MOT3P54785 490 aaKnown RBP2.42□□□□□ -2.02
UBP1YDL122W RPT6Q01939 405 aaKnown RBP2.42□□□□□ -2.02
UBP1YDL122W YDR338CQ05497 695 aa2.42□□□□□ -2.02
UBP1YDL122W HRQ1Q05549 1077 aa2.42□□□□□ -2.02
UBP1YDL122W MRL1Q06815 381 aa2.42□□□□□ -2.02
UBP1YDL122W CLP1Q08685 445 aaPredicted RBP2.42□□□□□ -2.02
UBP1YDL122W YPQ1Q12010 308 aa2.42□□□□□ -2.02
UBP1YDL122W RPL4AP10664 362 aaKnown RBP2.42□□□□□ -2.02
UBP1YDL122W ABF1P14164 731 aa2.42□□□□□ -2.02
UBP1YDL122W SEC62P21825 274 aa2.42□□□□□ -2.02
UBP1YDL122W CIN8P27895 1000 aa2.42□□□□□ -2.02
UBP1YDL122W MRP8P35719 219 aa2.42□□□□□ -2.02
UBP1YDL122W YKR051WP36142 418 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms