RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W TIF1P10081 395 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W RPL8AP17076 256 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W MEI4P29467 408 aa2.11□□□□□ -2.07
USO1YDL058W RPC34P32910 317 aa2.11□□□□□ -2.07
USO1YDL058W CAF4P36130 643 aa2.11□□□□□ -2.07
USO1YDL058W GUA1P38625 525 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W GDH3P39708 457 aa2.11□□□□□ -2.07
USO1YDL058W GDI1P39958 451 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W SWP82P43554 623 aa2.11□□□□□ -2.07
USO1YDL058W YJR142WP47173 342 aa2.11□□□□□ -2.07
USO1YDL058W ASN2P49090 572 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W YGR273CP53329 174 aa2.11□□□□□ -2.07
USO1YDL058W MPS1P54199 764 aa2.11□□□□□ -2.07
USO1YDL058W PNP1Q05788 311 aa2.11□□□□□ -2.07
USO1YDL058W GMC2Q06201 188 aa2.11□□□□□ -2.07
USO1YDL058W RSC58Q07979 502 aa2.11□□□□□ -2.07
USO1YDL058W AAD15Q08361 143 aa2.11□□□□□ -2.07
USO1YDL058W SSP2Q08646 371 aa2.11□□□□□ -2.07
USO1YDL058W SOG2Q08817 791 aa2.11□□□□□ -2.07
USO1YDL058W CTI6Q08923 506 aa2.11□□□□□ -2.07
USO1YDL058W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
USO1YDL058W YML002WP0CF17 737 aa2.11□□□□□ -2.07
USO1YDL058W SAM1P10659 382 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W PUT4P15380 627 aa2.11□□□□□ -2.07
USO1YDL058W TRX2P22803 104 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W IFM1P25038 676 aa2.11□□□□□ -2.07
USO1YDL058W BUD14P27637 709 aa2.11□□□□□ -2.07
USO1YDL058W PXL1P36166 706 aa2.11□□□□□ -2.07
USO1YDL058W UBX7P38349 436 aa2.11□□□□□ -2.07
USO1YDL058W PAN5P38787 379 aa2.11□□□□□ -2.07
USO1YDL058W MNL1P38888 796 aa2.11□□□□□ -2.07
USO1YDL058W CKB2P38930 258 aa2.11□□□□□ -2.07
USO1YDL058W TAT2P38967 592 aa2.11□□□□□ -2.07
USO1YDL058W PKP1P40530 394 aa2.11□□□□□ -2.07
USO1YDL058W MET28P40573 187 aa2.11□□□□□ -2.07
USO1YDL058W FET4P40988 552 aa2.11□□□□□ -2.07
USO1YDL058W BST1P43571 1029 aa2.11□□□□□ -2.07
USO1YDL058W ADO1P47143 340 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W YJR115WP47152 169 aa2.11□□□□□ -2.07
USO1YDL058W ILM1P47155 203 aa2.11□□□□□ -2.07
USO1YDL058W GCV1P48015 400 aa2.11□□□□□ -2.07
USO1YDL058W MRPL50P53724 139 aa2.11□□□□□ -2.07
USO1YDL058W RMT2Q03305 412 aa2.11□□□□□ -2.07
USO1YDL058W STE20Q03497 939 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W SDH7Q04401 133 aa2.11□□□□□ -2.07
USO1YDL058W PRM6Q04705 352 aa2.11□□□□□ -2.07
USO1YDL058W MDM36Q06820 579 aa2.11□□□□□ -2.07
USO1YDL058W YLR001CQ07895 862 aa2.11□□□□□ -2.07
USO1YDL058W GYP1Q08484 637 aa2.11□□□□□ -2.07
USO1YDL058W YDR056CQ12025 205 aa2.11□□□□□ -2.07
USO1YDL058W HAT1Q12341 374 aa2.11□□□□□ -2.07
USO1YDL058W MDM20Q12387 796 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W TY2B-LR1P0C2J3 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-FP0CX63 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-GR2P0CX64 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-CP25384 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-DR2Q03494 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY1B-DR1Q03855 1755 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-DR3Q07791 1770 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W TY2B-OR1Q12113 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-DR1Q12472 1770 aa2.11□□□□□ -2.07
USO1YDL058W TY2B-OR2Q12501 1770 aa2.11□□□□□ -2.07
USO1YDL058W RKR1Q04781 1562 aa2.11□□□□□ -2.07
USO1YDL058W ADE3P07245 946 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W CDC24P11433 854 aaPredicted RBP2.11□□□□□ -2.07
USO1YDL058W MDH1P17505 334 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
USO1YDL058W RNR1P21524 888 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W HCM1P25364 564 aa2.11□□□□□ -2.07
USO1YDL058W PAT1P25644 796 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W PGM1P33401 570 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W PTC3P34221 468 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W UBP11P36026 717 aa2.11□□□□□ -2.07
USO1YDL058W VID24P38263 362 aa2.11□□□□□ -2.07
USO1YDL058W YSW1P38280 609 aa2.11□□□□□ -2.07
USO1YDL058W FTH1P38310 465 aa2.11□□□□□ -2.07
USO1YDL058W ERP5P38819 212 aa2.11□□□□□ -2.07
USO1YDL058W JHD1P40034 492 aa2.11□□□□□ -2.07
USO1YDL058W YAR1P46683 200 aa2.11□□□□□ -2.07
USO1YDL058W LIF1P53150 421 aa2.11□□□□□ -2.07
USO1YDL058W SEC5P89102 971 aa2.11□□□□□ -2.07
USO1YDL058W GRX5Q02784 150 aa2.11□□□□□ -2.07
USO1YDL058W BUD22Q04347 519 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W YMR027WQ04371 470 aa2.11□□□□□ -2.07
USO1YDL058W ERV41Q04651 352 aa2.11□□□□□ -2.07
USO1YDL058W GTO3Q04806 366 aa2.11□□□□□ -2.07
USO1YDL058W ATG26Q06321 1198 aa2.11□□□□□ -2.07
USO1YDL058W LUC7Q07508 261 aaPredicted RBP2.11□□□□□ -2.07
USO1YDL058W SGT1Q08446 395 aa2.11□□□□□ -2.07
USO1YDL058W TRE1Q08919 783 aa2.11□□□□□ -2.07
USO1YDL058W GRX6Q12438 231 aa2.11□□□□□ -2.07
USO1YDL058W NSP1P14907 823 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W PDC5P16467 563 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TYR1P20049 452 aa2.1□□□□□ -2.07
USO1YDL058W AAD3P25612 363 aa2.1□□□□□ -2.07
USO1YDL058W PER1P25625 357 aa2.1□□□□□ -2.07
USO1YDL058W SLX5P32828 619 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W BUD2P33314 1104 aa2.1□□□□□ -2.07
USO1YDL058W ECM4P36156 370 aa2.1□□□□□ -2.07
USO1YDL058W ERT1P38140 529 aa2.1□□□□□ -2.07
USO1YDL058W SPP381P38282 291 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 1650.2 ms