RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	PXA1	P41909	870 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	SRB7	P47822	140 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	GCV2	P49095	1034 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	TAF4	P50105	388 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	YGR130C	P53278	816 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	CPR6	P53691	371 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	ASI2	P53895	289 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	REC102	Q02721	264 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	RCR2	Q03446	210 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	EIS1	Q05050	843 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	DIN7	Q12086	430 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	YLR122C	Q12312	125 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	LPX1	Q12405	387 aa	Known RBP	4.83	□□□□□ -1.64
RTK1	YDL025C	VPS5	Q92331	675 aa		4.83	□□□□□ -1.64
RTK1	YDL025C	CDC31	P06704	161 aa	Known RBP	4.82	□□□□□ -1.64
RTK1	YDL025C	YCL049C	P25577	312 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	KAE1	P36132	386 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	GID8	P40208	455 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	URM1	P40554	99 aa	Predicted RBP	4.82	□□□□□ -1.64
RTK1	YDL025C	YNR071C	P53757	342 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	SQS1	P53866	767 aa	Known RBP	4.82	□□□□□ -1.64
RTK1	YDL025C	ARG5,6	Q01217	863 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	ROT1	Q03691	256 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	NSE5	Q03718	556 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	HOS1	Q12214	470 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	ATG11	Q12527	1178 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	NUP159	P40477	1460 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	TRM732	Q03496	1420 aa		4.82	□□□□□ -1.64
RTK1	YDL025C	YLR415C	O13578	112 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	SNF1	P06782	633 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	IME1	P21190	360 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	SAN1	P22470	610 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	STE14	P32584	239 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	RPT3	P33298	428 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	PGM1	P33401	570 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	MUD2	P36084	527 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	APT2	P36973	181 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	YNL195C	P40168	261 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	ESL1	P40456	1118 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	BUD8	P41698	603 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	BNA1	P47096	177 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	VBA4	Q04602	768 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	VPS36	Q06696	566 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	ADY3	Q07732	790 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	YOR352W	Q08816	343 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	RPP2A	P05319	106 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	MTF2	P10849	440 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	UBC1	P21734	215 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	YBR259W	P38338	688 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	MET12	P46151	657 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	CCT8	P47079	568 aa	Known RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	MDR1	P53258	950 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	PPN1	Q04119	674 aa		4.81	□□□□□ -1.64
RTK1	YDL025C	IWR1	Q07532	353 aa	Predicted RBP	4.81	□□□□□ -1.64
RTK1	YDL025C	CYC7	P00045	113 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	LEU2	P04173	364 aa	Predicted RBP	4.8	□□□□□ -1.64
RTK1	YDL025C	CWH43	P25618	953 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	MRPL36	P36531	177 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	YLF2	P38746	405 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	UME6	P39001	836 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	CCT3	P39077	534 aa	Known RBP	4.8	□□□□□ -1.64
RTK1	YDL025C	VPS8	P39702	1274 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	SAP4	P53036	818 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	YPL034W	Q03083	165 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	PLB2	Q03674	706 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	TRI1	Q05024	226 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	VID22	Q05934	901 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	SGD1	Q06132	899 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	MCA1	Q08601	432 aa		4.8	□□□□□ -1.64
RTK1	YDL025C	PUS1	Q12211	544 aa	Known RBP	4.8	□□□□□ -1.64
RTK1	YDL025C	ERG20	P08524	352 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RTK1	YDL025C	PRP4	P20053	465 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	SIR1	P21691	654 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	SEC21	P32074	935 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	NFU1	P32860	256 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	RMA1	P36001	430 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	YHR112C	P38716	378 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	ETP1	P38748	585 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	AXL2	P38928	823 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	YEL068C	P39977	110 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	PEF1	P53238	335 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	CBK1	P53894	756 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	ACS1	Q01574	713 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	MCM21	Q06675	368 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	TRM8	Q12009	286 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	TY2B-B	Q12491	1770 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	HIS5	P07172	385 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	TUB3	P09734	445 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	GUK1	P15454	187 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	PRP22	P24384	1145 aa	Known RBP	4.79	□□□□□ -1.64
RTK1	YDL025C	IFA38	P38286	347 aa		4.79	□□□□□ -1.64
RTK1	YDL025C	NUP170	P38181	1502 aa		4.78	□□□□□ -1.64
RTK1	YDL025C	URA3	P03962	267 aa		4.78	□□□□□ -1.64
RTK1	YDL025C	RPS9B	P05755	195 aa	Known RBP	4.78	□□□□□ -1.64
RTK1	YDL025C	RNR1	P21524	888 aa	Known RBP	4.78	□□□□□ -1.64
RTK1	YDL025C	SWI4	P25302	1093 aa	Known RBP	4.78	□□□□□ -1.64
RTK1	YDL025C	YBR138C	P38277	524 aa		4.78	□□□□□ -1.64
RTK1	YDL025C	DPH1	P40487	425 aa	Known RBP	4.78	□□□□□ -1.64
RTK1	YDL025C	BIT61	P47041	543 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms