RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A TMN3P40071 706 aa4.13□□□□□ -1.75
RIM1YCR028C-A SPC105P53148 917 aa4.13□□□□□ -1.75
RIM1YCR028C-A YSH1Q06224 779 aaPredicted RBP4.13□□□□□ -1.75
RIM1YCR028C-A IZH3Q07959 543 aa4.13□□□□□ -1.75
RIM1YCR028C-A NGL1Q08213 363 aaKnown RBP4.13□□□□□ -1.75
RIM1YCR028C-A ACO1P19414 778 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
RIM1YCR028C-A MF(ALPHA)2P32435 120 aa4.12□□□□□ -1.75
RIM1YCR028C-A ELF1P36053 145 aa4.12□□□□□ -1.75
RIM1YCR028C-A CDS1P38221 457 aa4.12□□□□□ -1.75
RIM1YCR028C-A CRG1P38892 291 aaRIP-Chip data4.12□□□□□ -1.75not detected
RIM1YCR028C-A YIL166CP40445 542 aa4.12□□□□□ -1.75
RIM1YCR028C-A NIT2P47016 307 aa4.12□□□□□ -1.75
RIM1YCR028C-A LAM4P38800 1345 aa4.12□□□□□ -1.75
RIM1YCR028C-A EMP70P32802 667 aa4.11□□□□□ -1.75
RIM1YCR028C-A PPZ2P33329 710 aa4.11□□□□□ -1.75
RIM1YCR028C-A PPE1P38796 400 aa4.11□□□□□ -1.75
RIM1YCR028C-A FTR1P40088 404 aa4.11□□□□□ -1.75
RIM1YCR028C-A PRM2P40534 656 aa4.11□□□□□ -1.75
RIM1YCR028C-A ENP2P48234 707 aaKnown RBP4.11□□□□□ -1.75
RIM1YCR028C-A SLD3P53135 668 aa4.11□□□□□ -1.75
RIM1YCR028C-A FOL1P53848 824 aa4.11□□□□□ -1.75
RIM1YCR028C-A FDC1Q03034 503 aa4.11□□□□□ -1.75
RIM1YCR028C-A RKI1Q12189 258 aa4.11□□□□□ -1.75
RIM1YCR028C-A SPT6P23615 1451 aaKnown RBP4.11□□□□□ -1.75
RIM1YCR028C-A TUP1P16649 713 aa4.1□□□□□ -1.75
RIM1YCR028C-A HXT4P32467 576 aa4.1□□□□□ -1.75
RIM1YCR028C-A PEA2P40091 420 aa4.1□□□□□ -1.75
RIM1YCR028C-A COG6P53959 839 aa4.1□□□□□ -1.75
RIM1YCR028C-A APM1Q00776 475 aaPredicted RBP4.1□□□□□ -1.75
RIM1YCR028C-A UFO1Q04511 668 aa4.1□□□□□ -1.75
RIM1YCR028C-A HSL1P34244 1518 aa4.1□□□□□ -1.75
RIM1YCR028C-A RPN13O13563 156 aa4.09□□□□□ -1.75
RIM1YCR028C-A SSB1P11484 613 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A COX11P19516 300 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A SPO11P23179 398 aa4.09□□□□□ -1.75
RIM1YCR028C-A MTC7P32633 139 aa4.09□□□□□ -1.75
RIM1YCR028C-A RMA1P36001 430 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A SRP68P38687 599 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A YEL020CP39994 560 aa4.09□□□□□ -1.75
RIM1YCR028C-A SSB2P40150 613 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A THI6P41835 540 aa4.09□□□□□ -1.75
RIM1YCR028C-A YGR054WP53235 642 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A TIM50Q02776 476 aa4.09□□□□□ -1.75
RIM1YCR028C-A BMS1Q08965 1183 aaKnown RBP4.09□□□□□ -1.75
RIM1YCR028C-A AIM41Q12032 185 aa4.09□□□□□ -1.75
RIM1YCR028C-A YEL076C-AP0CX16 216 aa4.08□□□□□ -1.76
RIM1YCR028C-A YLR464WP0CX17 216 aa4.08□□□□□ -1.76
RIM1YCR028C-A HEM12P32347 362 aaPredicted RBP4.08□□□□□ -1.76
RIM1YCR028C-A YMC2P38087 329 aa4.08□□□□□ -1.76
RIM1YCR028C-A EHT1P38295 451 aa4.08□□□□□ -1.76
RIM1YCR028C-A PAF1P38351 445 aa4.08□□□□□ -1.76
RIM1YCR028C-A YEL076CP39971 216 aa4.08□□□□□ -1.76
RIM1YCR028C-A EMP65P40085 556 aa4.08□□□□□ -1.76
RIM1YCR028C-A SNF12P53628 566 aa4.08□□□□□ -1.76
RIM1YCR028C-A HLR1Q04429 423 aa4.08□□□□□ -1.76
RIM1YCR028C-A YCG1Q06680 1035 aa4.08□□□□□ -1.76
RIM1YCR028C-A TY1B-DR4Q07793 1604 aa4.08□□□□□ -1.76
RIM1YCR028C-A CWC2Q12046 339 aaPredicted RBP4.08□□□□□ -1.76
RIM1YCR028C-A TUB1P09733 447 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A HMG2P12684 1045 aa4.07□□□□□ -1.76
RIM1YCR028C-A STE12P13574 688 aa4.07□□□□□ -1.76
RIM1YCR028C-A RPA135P22138 1203 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A MRC1P25588 1096 aa4.07□□□□□ -1.76
RIM1YCR028C-A ENP1P38333 483 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A RIX1P38883 763 aaPredicted RBP4.07□□□□□ -1.76
RIM1YCR028C-A YEL025CP39991 1188 aa4.07□□□□□ -1.76
RIM1YCR028C-A MIT1P40002 666 aa4.07□□□□□ -1.76
RIM1YCR028C-A PMT6P42934 759 aa4.07□□□□□ -1.76
RIM1YCR028C-A SQS1P53866 767 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A DAK1P54838 584 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A NGL2Q03264 515 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A EFR3Q03653 782 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A CEF1Q03654 590 aaPredicted RBP4.07□□□□□ -1.76
RIM1YCR028C-A YOR378WQ08902 515 aa4.07□□□□□ -1.76
RIM1YCR028C-A MDM20Q12387 796 aaKnown RBP4.07□□□□□ -1.76
RIM1YCR028C-A KAR1P11927 433 aa4.06□□□□□ -1.76
RIM1YCR028C-A ADY2P25613 283 aa4.06□□□□□ -1.76
RIM1YCR028C-A PLC1P32383 869 aa4.06□□□□□ -1.76
RIM1YCR028C-A TFC4P33339 1025 aa4.06□□□□□ -1.76
RIM1YCR028C-A MUP3P38734 546 aa4.06□□□□□ -1.76
RIM1YCR028C-A PMC1P38929 1173 aaPredicted RBP4.06□□□□□ -1.76
RIM1YCR028C-A IRC5P43610 853 aa4.06□□□□□ -1.76
RIM1YCR028C-A PEX14P53112 341 aa4.06□□□□□ -1.76
RIM1YCR028C-A MFM1Q02783 413 aa4.06□□□□□ -1.76
RIM1YCR028C-A TRS23Q03784 219 aa4.06□□□□□ -1.76
RIM1YCR028C-A ECM38Q05902 660 aaPredicted RBP4.06□□□□□ -1.76
RIM1YCR028C-A ARO10Q06408 635 aa4.06□□□□□ -1.76
RIM1YCR028C-A XRN1P22147 1528 aaKnown RBP4.05□□□□□ -1.76
RIM1YCR028C-A BNR1P40450 1375 aa4.05□□□□□ -1.76
RIM1YCR028C-A PHO5P00635 467 aa4.05□□□□□ -1.76
RIM1YCR028C-A STE4P18851 423 aa4.05□□□□□ -1.76
RIM1YCR028C-A ILV6P25605 309 aaKnown RBP4.05□□□□□ -1.76
RIM1YCR028C-A PEX2P32800 271 aa4.05□□□□□ -1.76
RIM1YCR028C-A MRPL7P36519 292 aa4.05□□□□□ -1.76
RIM1YCR028C-A EAF5P39995 279 aa4.05□□□□□ -1.76
RIM1YCR028C-A YDL183CP48569 320 aa4.05□□□□□ -1.76
RIM1YCR028C-A ASN1P49089 572 aaKnown RBP4.05□□□□□ -1.76
RIM1YCR028C-A MDR1P53258 950 aa4.05□□□□□ -1.76
RIM1YCR028C-A YDR179W-AQ03983 463 aa4.05□□□□□ -1.76
RIM1YCR028C-A ARR3Q06598 404 aa4.05□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms