RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C CDC11P32458 415 aa8.72□□□□□ -1.01
YCP4YCR004C PDR3P33200 976 aa8.72□□□□□ -1.01
YCP4YCR004C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
YCP4YCR004C HRQ1Q05549 1077 aa8.72□□□□□ -1.01
YCP4YCR004C YLR297WQ05899 129 aa8.72□□□□□ -1.01
YCP4YCR004C CSR1Q06705 408 aaKnown RBP8.72□□□□□ -1.01
YCP4YCR004C SIL1Q08199 421 aa8.72□□□□□ -1.01
YCP4YCR004C CLP1Q08685 445 aaPredicted RBP8.72□□□□□ -1.01
YCP4YCR004C CCP1P00431 361 aa8.71□□□□□ -1.02
YCP4YCR004C YER152CP10356 443 aa8.71□□□□□ -1.02
YCP4YCR004C CSG2P35206 410 aa8.71□□□□□ -1.02
YCP4YCR004C LEU5P38702 357 aa8.71□□□□□ -1.02
YCP4YCR004C EXO1P39875 702 aa8.71□□□□□ -1.02
YCP4YCR004C YPS6P40583 537 aa8.71□□□□□ -1.02
YCP4YCR004C BST1P43571 1029 aa8.71□□□□□ -1.02
YCP4YCR004C DUG1P43616 481 aaKnown RBP8.71□□□□□ -1.02
YCP4YCR004C ASG7P46993 209 aa8.71□□□□□ -1.02
YCP4YCR004C COQ5P49017 307 aa8.71□□□□□ -1.02
YCP4YCR004C PRP24P49960 444 aaKnown RBP8.71□□□□□ -1.02
YCP4YCR004C MNN10P50108 393 aaKnown RBP8.71□□□□□ -1.02
YCP4YCR004C YPL062WQ02781 134 aa8.71□□□□□ -1.02
YCP4YCR004C LCB5Q06147 687 aaKnown RBP8.71□□□□□ -1.02
YCP4YCR004C RSB1Q08417 382 aa8.71□□□□□ -1.02
YCP4YCR004C YOL098CQ12496 1037 aa8.71□□□□□ -1.02
YCP4YCR004C PPR1P07272 904 aaPredicted RBP8.7□□□□□ -1.02
YCP4YCR004C YJU3P28321 313 aa8.7□□□□□ -1.02
YCP4YCR004C PMI40P29952 429 aaKnown RBP8.7□□□□□ -1.02
YCP4YCR004C SEC6P32844 805 aa8.7□□□□□ -1.02
YCP4YCR004C BCD1P38772 366 aa8.7□□□□□ -1.02
YCP4YCR004C DYS1P38791 387 aa8.7□□□□□ -1.02
YCP4YCR004C SAK1P38990 1142 aa8.7□□□□□ -1.02
YCP4YCR004C TIF34P40217 347 aaKnown RBP8.7□□□□□ -1.02
YCP4YCR004C AQR1P53943 586 aa8.7□□□□□ -1.02
YCP4YCR004C VMS1Q04311 632 aaKnown RBP8.7□□□□□ -1.02
YCP4YCR004C OPI10Q08202 246 aa8.7□□□□□ -1.02
YCP4YCR004C NDD1Q08887 554 aa8.7□□□□□ -1.02
YCP4YCR004C AFT2Q08957 416 aa8.7□□□□□ -1.02
YCP4YCR004C HMI1Q12039 706 aa8.7□□□□□ -1.02
YCP4YCR004C IRA1P18963 3092 aa8.69□□□□□ -1.02
YCP4YCR004C SNF5P18480 905 aa8.69□□□□□ -1.02
YCP4YCR004C APL1P27351 700 aa8.69□□□□□ -1.02
YCP4YCR004C PYC2P32327 1180 aaKnown RBP8.69□□□□□ -1.02
YCP4YCR004C MRPL40P36534 297 aa8.69□□□□□ -1.02
YCP4YCR004C ABZ1P37254 787 aaPredicted RBP8.69□□□□□ -1.02
YCP4YCR004C YBR238CP38330 731 aaKnown RBP8.69□□□□□ -1.02
YCP4YCR004C YHR078WP38799 552 aa8.69□□□□□ -1.02
YCP4YCR004C CRP1P38845 465 aaKnown RBP8.69□□□□□ -1.02
YCP4YCR004C CIR1P42940 261 aa8.69□□□□□ -1.02
YCP4YCR004C IML2P47031 731 aa8.69□□□□□ -1.02
YCP4YCR004C RTT101P47050 842 aa8.69□□□□□ -1.02
YCP4YCR004C YGR237CP50089 785 aa8.69□□□□□ -1.02
YCP4YCR004C TRM112P53738 135 aaPredicted RBP8.69□□□□□ -1.02
YCP4YCR004C YNL144CP53907 740 aa8.69□□□□□ -1.02
YCP4YCR004C DIS3Q08162 1001 aaKnown RBP8.69□□□□□ -1.02
YCP4YCR004C COX3P00420 269 aa8.68□□□□□ -1.02
YCP4YCR004C PYC1P11154 1178 aaKnown RBP8.68□□□□□ -1.02
YCP4YCR004C MET22P32179 357 aa8.68□□□□□ -1.02
YCP4YCR004C RTG1P32607 177 aa8.68□□□□□ -1.02
YCP4YCR004C PXA2P34230 853 aa8.68□□□□□ -1.02
YCP4YCR004C URA8P38627 578 aaPredicted RBP8.68□□□□□ -1.02
YCP4YCR004C WSC4P38739 605 aa8.68□□□□□ -1.02
YCP4YCR004C PRK1P40494 810 aa8.68□□□□□ -1.02
YCP4YCR004C YMR187CQ03236 431 aa8.68□□□□□ -1.02
YCP4YCR004C YCS4Q06156 1176 aa8.68□□□□□ -1.02
YCP4YCR004C YAP7Q08182 245 aa8.68□□□□□ -1.02
YCP4YCR004C RPN8Q08723 338 aaKnown RBP8.68□□□□□ -1.02
YCP4YCR004C YIH1P25637 258 aa8.67□□□□□ -1.02
YCP4YCR004C CBR1P38626 284 aaKnown RBP8.67□□□□□ -1.02
YCP4YCR004C STU2P46675 888 aa8.67□□□□□ -1.02
YCP4YCR004C YPT11P48559 417 aa8.67□□□□□ -1.02
YCP4YCR004C DOS2P54858 310 aa8.67□□□□□ -1.02
YCP4YCR004C AIM32Q04689 311 aa8.67□□□□□ -1.02
YCP4YCR004C SPO75Q07798 868 aa8.67□□□□□ -1.02
YCP4YCR004C YOL036WQ08206 761 aa8.67□□□□□ -1.02
YCP4YCR004C PEX15Q08215 383 aa8.67□□□□□ -1.02
YCP4YCR004C THI20Q08224 551 aa8.67□□□□□ -1.02
YCP4YCR004C PAB1P04147 577 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
YCP4YCR004C CYC8P14922 966 aa8.66□□□□□ -1.02
YCP4YCR004C VMA4P22203 233 aaKnown RBP8.66□□□□□ -1.02
YCP4YCR004C ERG6P25087 383 aaKnown RBP8.66□□□□□ -1.02
YCP4YCR004C PUF4P25339 888 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
YCP4YCR004C SFP1P32432 683 aa8.66□□□□□ -1.02
YCP4YCR004C DCW1P36091 449 aa8.66□□□□□ -1.02
YCP4YCR004C PFS1P38872 237 aa8.66□□□□□ -1.02
YCP4YCR004C YER130CP39959 443 aa8.66□□□□□ -1.02
YCP4YCR004C YEL075CP39972 122 aa8.66□□□□□ -1.02
YCP4YCR004C YER158CP40095 573 aa8.66□□□□□ -1.02
YCP4YCR004C AIP1P46680 615 aaKnown RBP8.66□□□□□ -1.02
YCP4YCR004C YMR1P47147 688 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
YCP4YCR004C HOP2P53187 214 aa8.66□□□□□ -1.02
YCP4YCR004C RPN4Q03465 531 aa8.66□□□□□ -1.02
YCP4YCR004C DDP1Q99321 188 aaKnown RBP8.66□□□□□ -1.02
YCP4YCR004C CDC37P06101 506 aaKnown RBP8.65□□□□□ -1.02
YCP4YCR004C ADE3P07245 946 aaKnown RBP8.65□□□□□ -1.02
YCP4YCR004C CDC33P07260 213 aaKnown RBP8.65□□□□□ -1.02
YCP4YCR004C TYE7P33122 291 aaPredicted RBP8.65□□□□□ -1.02
YCP4YCR004C LTP1P40347 161 aa8.65□□□□□ -1.02
YCP4YCR004C SER33P40510 469 aa8.65□□□□□ -1.02
YCP4YCR004C DSN1P40568 576 aa8.65□□□□□ -1.02
YCP4YCR004C YML082WQ04533 649 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms