RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W CLU1Q03690 1277 aaKnown RBP6.2□□□□□ -1.42
SHP1YBL058W GIR2Q03768 265 aaPredicted RBP6.2□□□□□ -1.42
SHP1YBL058W VMS1Q04311 632 aaKnown RBP6.2□□□□□ -1.42
SHP1YBL058W HEL2Q05580 639 aaKnown RBP6.2□□□□□ -1.42
SHP1YBL058W HRD3Q05787 833 aa6.2□□□□□ -1.42
SHP1YBL058W SPP382Q06411 708 aaPredicted RBP6.2□□□□□ -1.42
SHP1YBL058W ALR1Q08269 859 aa6.2□□□□□ -1.42
SHP1YBL058W SAP190P36123 1033 aa6.19□□□□□ -1.42
SHP1YBL058W ECM13P38195 257 aa6.19□□□□□ -1.42
SHP1YBL058W KTR7P40504 517 aa6.19□□□□□ -1.42
SHP1YBL058W UFE1P41834 346 aa6.19□□□□□ -1.42
SHP1YBL058W PFD1P46988 109 aa6.19□□□□□ -1.42
SHP1YBL058W VTC4P47075 721 aa6.19□□□□□ -1.42
SHP1YBL058W COS5P47187 383 aa6.19□□□□□ -1.42
SHP1YBL058W YGL036WP53185 909 aaPredicted RBP6.19□□□□□ -1.42
SHP1YBL058W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42 RIP-Chip
SHP1YBL058W PIR3Q03180 325 aa6.19□□□□□ -1.42
SHP1YBL058W CLP1Q08685 445 aaPredicted RBP6.19□□□□□ -1.42
SHP1YBL058W TRE1Q08919 783 aa6.19□□□□□ -1.42
SHP1YBL058W LCB4Q12246 624 aa6.19□□□□□ -1.42
SHP1YBL058W AI5_BETAQ9ZZX0 354 aa6.19□□□□□ -1.42
SHP1YBL058W SGE1P33335 543 aa6.18□□□□□ -1.42
SHP1YBL058W DUN1P39009 513 aa6.18□□□□□ -1.42
SHP1YBL058W RPT2P40327 437 aaKnown RBP6.18□□□□□ -1.42
SHP1YBL058W FLC3P53121 802 aa6.18□□□□□ -1.42
SHP1YBL058W KXD1P53158 218 aa6.18□□□□□ -1.42
SHP1YBL058W RSC1P53236 928 aa6.18□□□□□ -1.42
SHP1YBL058W SPG3Q04398 127 aaPredicted RBP6.18□□□□□ -1.42
SHP1YBL058W RTN1Q04947 295 aaKnown RBP6.18□□□□□ -1.42
SHP1YBL058W ECM38Q05902 660 aaPredicted RBP6.18□□□□□ -1.42
SHP1YBL058W COG4Q06096 861 aa6.18□□□□□ -1.42
SHP1YBL058W CSR1Q06705 408 aaKnown RBP6.18□□□□□ -1.42
SHP1YBL058W GYP1Q08484 637 aa6.18□□□□□ -1.42
SHP1YBL058W AFT2Q08957 416 aa6.18□□□□□ -1.42
SHP1YBL058W VPS54Q12071 889 aa6.18□□□□□ -1.42
SHP1YBL058W BRR2P32639 2163 aaKnown RBP6.17□□□□□ -1.42
SHP1YBL058W PRT1P06103 763 aaKnown RBP6.17□□□□□ -1.42
SHP1YBL058W DAL2P25335 343 aa6.17□□□□□ -1.42
SHP1YBL058W CAP1P28495 268 aaKnown RBP6.17□□□□□ -1.42
SHP1YBL058W CCR4P31384 837 aaKnown RBP6.17□□□□□ -1.42
SHP1YBL058W UTH1P36135 365 aa6.17□□□□□ -1.42
SHP1YBL058W PSY2P40164 858 aa6.17□□□□□ -1.42
SHP1YBL058W AIP1P46680 615 aaKnown RBP6.17□□□□□ -1.42
SHP1YBL058W YGR237CP50089 785 aa6.17□□□□□ -1.42
SHP1YBL058W MND1P53102 219 aa6.17□□□□□ -1.42
SHP1YBL058W NPY1P53164 384 aa6.17□□□□□ -1.42
SHP1YBL058W DRN1P53255 507 aaKnown RBP6.17□□□□□ -1.42
SHP1YBL058W YNL144CP53907 740 aa6.17□□□□□ -1.42
SHP1YBL058W MCM16Q12262 181 aa6.17□□□□□ -1.42
SHP1YBL058W SPO21Q12411 609 aa6.17□□□□□ -1.42
SHP1YBL058W POL2P21951 2222 aaKnown RBP6.16□□□□□ -1.42
SHP1YBL058W TEC1P18412 486 aa6.16□□□□□ -1.42
SHP1YBL058W STE13P33894 931 aa6.16□□□□□ -1.42
SHP1YBL058W CSG2P35206 410 aa6.16□□□□□ -1.42
SHP1YBL058W YKT6P36015 200 aaKnown RBP6.16□□□□□ -1.42
SHP1YBL058W SRX1P36077 127 aa6.16□□□□□ -1.42
SHP1YBL058W ABZ1P37254 787 aaPredicted RBP6.16□□□□□ -1.42
SHP1YBL058W YBR053CP38235 358 aa6.16□□□□□ -1.42
SHP1YBL058W CRP1P38845 465 aaKnown RBP6.16□□□□□ -1.42
SHP1YBL058W YER130CP39959 443 aa6.16□□□□□ -1.42
SHP1YBL058W YJR061WP40355 935 aa6.16□□□□□ -1.42
SHP1YBL058W YPT11P48559 417 aa6.16□□□□□ -1.42
SHP1YBL058W RIM21P48565 533 aa6.16□□□□□ -1.42
SHP1YBL058W GPD1Q00055 391 aaKnown RBP6.16□□□□□ -1.42
SHP1YBL058W OPT2Q06593 877 aa6.16□□□□□ -1.42
SHP1YBL058W BUD20Q08004 166 aaPredicted RBP6.16□□□□□ -1.42
SHP1YBL058W DIS3Q08162 1001 aaKnown RBP6.16□□□□□ -1.42
SHP1YBL058W MDM38Q08179 573 aa6.16□□□□□ -1.42
SHP1YBL058W TY1A-DR4O74302 440 aa6.15□□□□□ -1.42
SHP1YBL058W RAD3P06839 778 aa6.15□□□□□ -1.42
SHP1YBL058W GPA1P08539 472 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-HP0C2I4 478 aaKnown RBP6.15□□□□□ -1.42
SHP1YBL058W TY1A-AP0CX57 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-PR1P0CX58 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-ORP0CX59 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-PR2P0CX60 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-DR5P0CX65 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-ER2P0CX66 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-GR3P0CX67 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-LR1P0CX68 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-MR2P0CX69 440 aa6.15□□□□□ -1.42
SHP1YBL058W ARF2P19146 181 aaKnown RBP6.15□□□□□ -1.42
SHP1YBL058W RML2P32611 393 aa6.15□□□□□ -1.42
SHP1YBL058W RPC25P35718 212 aa6.15□□□□□ -1.42
SHP1YBL058W WSC4P38739 605 aa6.15□□□□□ -1.42
SHP1YBL058W BCD1P38772 366 aa6.15□□□□□ -1.42
SHP1YBL058W BAT1P38891 393 aaKnown RBP6.15□□□□□ -1.42
SHP1YBL058W YEL075CP39972 122 aa6.15□□□□□ -1.42
SHP1YBL058W UBP7P40453 1071 aa6.15□□□□□ -1.42
SHP1YBL058W PRK1P40494 810 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-JR2P47099 440 aa6.15□□□□□ -1.42
SHP1YBL058W RPA14P50106 137 aa6.15□□□□□ -1.42
SHP1YBL058W HFM1P51979 1187 aa6.15□□□□□ -1.42
SHP1YBL058W PYK2P52489 506 aaKnown RBP6.15□□□□□ -1.42
SHP1YBL058W TY1A-DR1Q03856 440 aa6.15□□□□□ -1.42
SHP1YBL058W ARO80Q04052 950 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-ML1Q04706 440 aaKnown RBP6.15□□□□□ -1.42
SHP1YBL058W YLR297WQ05899 129 aa6.15□□□□□ -1.42
SHP1YBL058W PMT7Q06644 662 aa6.15□□□□□ -1.42
SHP1YBL058W YAP7Q08182 245 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms