RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W TDA3P38758 523 aa7.05□□□□□ -1.28
SWD1YAR003W SET5P38890 526 aaKnown RBP7.05□□□□□ -1.28
SWD1YAR003W BUD16P39988 312 aa7.05□□□□□ -1.28
SWD1YAR003W KAP114P53067 1004 aa7.05□□□□□ -1.28
SWD1YAR003W GPD1Q00055 391 aaKnown RBP7.05□□□□□ -1.28
SWD1YAR003W HOS3Q02959 697 aaKnown RBP7.05□□□□□ -1.28
SWD1YAR003W MZM1Q03429 123 aaPredicted RBP7.05□□□□□ -1.28
SWD1YAR003W ERV41Q04651 352 aa7.05□□□□□ -1.28
SWD1YAR003W TAF10Q12030 206 aa7.05□□□□□ -1.28
SWD1YAR003W YPR027CQ12079 277 aa7.05□□□□□ -1.28
SWD1YAR003W Q0182Q9ZZW1 134 aa7.05□□□□□ -1.28
SWD1YAR003W PET111P08468 800 aa7.04□□□□□ -1.28
SWD1YAR003W CYS3P31373 394 aaKnown RBP7.04□□□□□ -1.28
SWD1YAR003W DBF4P32325 704 aa7.04□□□□□ -1.28
SWD1YAR003W APN2P38207 520 aa7.04□□□□□ -1.28
SWD1YAR003W RGD1P38339 666 aa7.04□□□□□ -1.28
SWD1YAR003W REI1P38344 393 aaPredicted RBP7.04□□□□□ -1.28
SWD1YAR003W HIS2P38635 335 aa7.04□□□□□ -1.28
SWD1YAR003W MSC7P38694 644 aa7.04□□□□□ -1.28
SWD1YAR003W YHR202WP38887 602 aa7.04□□□□□ -1.28
SWD1YAR003W SIP5P40210 489 aaKnown RBP7.04□□□□□ -1.28
SWD1YAR003W PHO86P46956 311 aa7.04□□□□□ -1.28
SWD1YAR003W TCB2P48231 1178 aa7.04□□□□□ -1.28
SWD1YAR003W STB4P50104 949 aa7.04□□□□□ -1.28
SWD1YAR003W MND1P53102 219 aa7.04□□□□□ -1.28
SWD1YAR003W YGL036WP53185 909 aaPredicted RBP7.04□□□□□ -1.28
SWD1YAR003W EEB1Q02891 456 aa7.04□□□□□ -1.28
SWD1YAR003W SNU56Q03782 492 aaKnown RBP7.04□□□□□ -1.28
SWD1YAR003W YMR114CQ04471 368 aaKnown RBP7.04□□□□□ -1.28
SWD1YAR003W CDD1Q06549 142 aa7.04□□□□□ -1.28
SWD1YAR003W RPP1AP05318 106 aaPredicted RBP7.03□□□□□ -1.28
SWD1YAR003W HAP2P06774 265 aa7.03□□□□□ -1.28
SWD1YAR003W CIT2P08679 460 aa7.03□□□□□ -1.28
SWD1YAR003W FPS1P23900 669 aa7.03□□□□□ -1.28
SWD1YAR003W DPB3P27344 201 aa7.03□□□□□ -1.28
SWD1YAR003W MLF3P32047 452 aa7.03□□□□□ -1.28
SWD1YAR003W SCD5P34758 872 aa7.03□□□□□ -1.28
SWD1YAR003W BYE1P36106 594 aa7.03□□□□□ -1.28
SWD1YAR003W CCL1P37366 393 aa7.03□□□□□ -1.28
SWD1YAR003W YMC2P38087 329 aa7.03□□□□□ -1.28
SWD1YAR003W CBR1P38626 284 aaKnown RBP7.03□□□□□ -1.28
SWD1YAR003W CCC2P38995 1004 aa7.03□□□□□ -1.28
SWD1YAR003W JHD1P40034 492 aa7.03□□□□□ -1.28
SWD1YAR003W MAD1P40957 749 aa7.03□□□□□ -1.28
SWD1YAR003W MCM6P53091 1017 aaKnown RBP7.03□□□□□ -1.28
SWD1YAR003W SPC98P53540 846 aa7.03□□□□□ -1.28
SWD1YAR003W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
SWD1YAR003W PKH2Q12236 1081 aaKnown RBP7.03□□□□□ -1.28
SWD1YAR003W SFI1Q12369 946 aa7.03□□□□□ -1.28
SWD1YAR003W STB3Q12427 513 aa7.03□□□□□ -1.28
SWD1YAR003W ZRT2Q12436 422 aa7.03□□□□□ -1.28
SWD1YAR003W NOP14Q99207 810 aaKnown RBP7.03□□□□□ -1.28
SWD1YAR003W GAL80P04387 435 aa7.02□□□□□ -1.29
SWD1YAR003W CHS1P08004 1131 aa7.02□□□□□ -1.29
SWD1YAR003W PUP1P25043 261 aa7.02□□□□□ -1.29
SWD1YAR003W LRE1P25579 583 aaKnown RBP7.02□□□□□ -1.29
SWD1YAR003W VBA3P25594 458 aa7.02□□□□□ -1.29
SWD1YAR003W GAC1P28006 793 aa7.02□□□□□ -1.29
SWD1YAR003W FRE1P32791 686 aa7.02□□□□□ -1.29
SWD1YAR003W SEG2P34250 1132 aa7.02□□□□□ -1.29
SWD1YAR003W VBA5P36172 582 aa7.02□□□□□ -1.29
SWD1YAR003W NCL1P38205 684 aaKnown RBP7.02□□□□□ -1.29
SWD1YAR003W SLX1P38324 304 aa7.02□□□□□ -1.29
SWD1YAR003W CEP3P40969 608 aa7.02□□□□□ -1.29
SWD1YAR003W RSC8P43609 557 aaKnown RBP7.02□□□□□ -1.29
SWD1YAR003W RPC17P47076 161 aa7.02□□□□□ -1.29
SWD1YAR003W BTN2P53286 410 aa7.02□□□□□ -1.29
SWD1YAR003W CWC22P53333 577 aaKnown RBP7.02□□□□□ -1.29
SWD1YAR003W BOP3P53958 396 aa7.02□□□□□ -1.29
SWD1YAR003W STP1Q00947 519 aa7.02□□□□□ -1.29
SWD1YAR003W MUB1Q03162 620 aa7.02□□□□□ -1.29
SWD1YAR003W NGL3Q03210 505 aa7.02□□□□□ -1.29
SWD1YAR003W ATG16Q03818 150 aa7.02□□□□□ -1.29
SWD1YAR003W ARO80Q04052 950 aa7.02□□□□□ -1.29
SWD1YAR003W GFA1P14742 717 aaKnown RBP7.01□□□□□ -1.29
SWD1YAR003W ADK2P26364 225 aa7.01□□□□□ -1.29
SWD1YAR003W VPH1P32563 840 aaKnown RBP7.01□□□□□ -1.29
SWD1YAR003W AGP2P38090 596 aa7.01□□□□□ -1.29
SWD1YAR003W RRT2P38332 387 aa7.01□□□□□ -1.29
SWD1YAR003W RCK2P38623 610 aa7.01□□□□□ -1.29
SWD1YAR003W MAL13P53338 473 aa7.01□□□□□ -1.29
SWD1YAR003W SXM1Q04175 944 aaKnown RBP7.01□□□□□ -1.29
SWD1YAR003W YML083CQ04526 418 aa7.01□□□□□ -1.29
SWD1YAR003W YDR222WQ04925 415 aa7.01□□□□□ -1.29
SWD1YAR003W MDM38Q08179 573 aa7.01□□□□□ -1.29
SWD1YAR003W SIL1Q08199 421 aa7.01□□□□□ -1.29
SWD1YAR003W YOR059CQ08448 450 aaKnown RBP7.01□□□□□ -1.29
SWD1YAR003W APC5Q08683 685 aa7.01□□□□□ -1.29
SWD1YAR003W TRE1Q08919 783 aa7.01□□□□□ -1.29
SWD1YAR003W YLR462WO13556 202 aa7□□□□□ -1.29
SWD1YAR003W ERG11P10614 530 aa7□□□□□ -1.29
SWD1YAR003W PMS1P14242 873 aa7□□□□□ -1.29
SWD1YAR003W CAD1P24813 409 aaKnown RBP7□□□□□ -1.29
SWD1YAR003W SEC1P30619 724 aaKnown RBP7□□□□□ -1.29
SWD1YAR003W ABD1P32783 436 aaPredicted RBP7□□□□□ -1.29
SWD1YAR003W PCM1P38628 557 aaKnown RBP7□□□□□ -1.29
SWD1YAR003W YHL049CP38722 271 aa7□□□□□ -1.29
SWD1YAR003W SMF1P38925 575 aa7□□□□□ -1.29
SWD1YAR003W YEL075CP39972 122 aa7□□□□□ -1.29
SWD1YAR003W YER189WP40104 122 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms