RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 SUGT1Q9Y2Z0 365 aa31.34■■■□□ 2.61
VEGFA-230ENST00000640482 PRKG1Q13976 671 aa31.33■■■□□ 2.61
VEGFA-230ENST00000640482 SUPT20HL1Q3ZLR7 823 aa31.33■■■□□ 2.61
VEGFA-230ENST00000640482 SPDYE2Q495Y8 402 aa31.33■■■□□ 2.61
VEGFA-230ENST00000640482 MAST3O60307 1309 aa31.32■■■□□ 2.6
VEGFA-230ENST00000640482 AOX1Q06278 1338 aa31.32■■■□□ 2.6
VEGFA-230ENST00000640482 GRIK5Q16478 980 aa31.32■■■□□ 2.6
VEGFA-230ENST00000640482 GNL3LQ9NVN8 582 aaKnown RBP31.32■■■□□ 2.6
VEGFA-230ENST00000640482 SAGE1Q9NXZ1 904 aa31.32■■■□□ 2.6
VEGFA-230ENST00000640482 ZNF70Q9UC06 446 aaPredicted RBP31.32■■■□□ 2.6
VEGFA-230ENST00000640482 WDR66Q8TBY9 1149 aa31.31■■■□□ 2.6
VEGFA-230ENST00000640482 TEKT1Q969V4 418 aa31.31■■■□□ 2.6
VEGFA-230ENST00000640482 CSRNP1Q96S65 589 aa31.31■■■□□ 2.6
VEGFA-230ENST00000640482 TDRD3Q9H7E2 651 aaKnown RBP31.31■■■□□ 2.6
VEGFA-230ENST00000640482 ANGEL1Q9UNK9 670 aaKnown RBP31.31■■■□□ 2.6
VEGFA-230ENST00000640482 PPP1R12BO60237 982 aaPredicted RBP31.3■■■□□ 2.6
VEGFA-230ENST00000640482 CAPN15O75808 1086 aa31.3■■■□□ 2.6
VEGFA-230ENST00000640482 RASA3Q14644 834 aa31.3■■■□□ 2.6
VEGFA-230ENST00000640482 TMEM57Q8N5G2 664 aa31.3■■■□□ 2.6
VEGFA-230ENST00000640482 MRIQ9BWK5 157 aa31.29■■■□□ 2.6
VEGFA-230ENST00000640482 LDLRAD1Q5T700 205 aa31.28■■■□□ 2.6
VEGFA-230ENST00000640482 FTSJ3Q8IY81 847 aaKnown RBP31.28■■■□□ 2.6
VEGFA-230ENST00000640482 MAP3K11Q16584 847 aa31.27■■■□□ 2.6
VEGFA-230ENST00000640482 RNF186Q9NXI6 227 aa31.27■■■□□ 2.6
VEGFA-230ENST00000640482 SSC5DA1L4H1 1573 aa31.26■■■□□ 2.6
VEGFA-230ENST00000640482 TNNI2P48788 182 aa31.26■■■□□ 2.59
VEGFA-230ENST00000640482 NBPF12Q5TAG4 269 aaPredicted RBP31.26■■■□□ 2.59
VEGFA-230ENST00000640482 AKAP2Q9Y2D5 859 aa31.26■■■□□ 2.59
VEGFA-230ENST00000640482 TRPA1O75762 1119 aa31.25■■■□□ 2.59
VEGFA-230ENST00000640482 ZDHHC15Q96MV8 337 aa31.25■■■□□ 2.59
VEGFA-230ENST00000640482 DENND2AQ9ULE3 1009 aa31.25■■■□□ 2.59
VEGFA-230ENST00000640482 FZD1Q9UP38 647 aa31.25■■■□□ 2.59
VEGFA-230ENST00000640482 UNCXA6NJT0 531 aa31.24■■■□□ 2.59
VEGFA-230ENST00000640482 TCP10L2B9ZVM9 353 aa31.24■■■□□ 2.59
VEGFA-230ENST00000640482 SEMA3EO15041 775 aa31.24■■■□□ 2.59
VEGFA-230ENST00000640482 MYH13Q9UKX3 1938 aa31.24■■■□□ 2.59
VEGFA-230ENST00000640482 PHKA1P46020 1223 aa31.23■■■□□ 2.59
VEGFA-230ENST00000640482 IREB2P48200 963 aaKnown RBP31.23■■■□□ 2.59
VEGFA-230ENST00000640482 HHIPL2Q6UWX4 724 aa31.23■■■□□ 2.59
VEGFA-230ENST00000640482 TMOD2Q9NZR1 351 aa31.23■■■□□ 2.59
VEGFA-230ENST00000640482 TFCP2Q12800 502 aa31.22■■■□□ 2.59
VEGFA-230ENST00000640482 SLC10A4Q96EP9 437 aa31.22■■■□□ 2.59
VEGFA-230ENST00000640482 ZBTB22O15209 634 aa31.21■■■□□ 2.59
VEGFA-230ENST00000640482 ADORA1P30542 326 aa31.21■■■□□ 2.59
VEGFA-230ENST00000640482 TIMM10P62072 90 aa31.21■■■□□ 2.59
VEGFA-230ENST00000640482 MKRN3Q13064 507 aaKnown RBP31.21■■■□□ 2.59
VEGFA-230ENST00000640482 CCDC102BQ68D86 513 aa31.21■■■□□ 2.59
VEGFA-230ENST00000640482 AKAP11Q9UKA4 1901 aa31.21■■■□□ 2.59
VEGFA-230ENST00000640482 PNMA6EA0A0J9YXQ4 647 aa31.2■■■□□ 2.59
VEGFA-230ENST00000640482 A0A1B0GUL7 405 aa31.2■■■□□ 2.59
VEGFA-230ENST00000640482 SREBF2Q12772 1141 aa31.2■■■□□ 2.59
VEGFA-230ENST00000640482 G3BP1Q13283 466 aaKnown RBP eCLIP31.2■■■□□ 2.59
VEGFA-230ENST00000640482 ITPRIPQ8IWB1 547 aa31.2■■■□□ 2.59
VEGFA-230ENST00000640482 SALL1Q9NSC2 1324 aa31.2■■■□□ 2.58
VEGFA-230ENST00000640482 LDHBP07195 334 aaKnown RBP31.19■■■□□ 2.58
VEGFA-230ENST00000640482 SPRYD7Q5W111 196 aa31.19■■■□□ 2.58
VEGFA-230ENST00000640482 APOBEC3HQ6NTF7 200 aaKnown RBP31.19■■■□□ 2.58
VEGFA-230ENST00000640482 TMEM39BQ9GZU3 492 aa31.19■■■□□ 2.58
VEGFA-230ENST00000640482 USP2O75604 605 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-230ENST00000640482 TM4SF4P48230 202 aa31.18■■■□□ 2.58
VEGFA-230ENST00000640482 MVPQ14764 893 aaKnown RBP31.18■■■□□ 2.58
VEGFA-230ENST00000640482 ZGPATQ8N5A5 531 aaKnown RBP31.18■■■□□ 2.58
VEGFA-230ENST00000640482 TEPSINQ96N21 525 aa31.18■■■□□ 2.58
VEGFA-230ENST00000640482 PRDX5P30044 214 aa31.17■■■□□ 2.58
VEGFA-230ENST00000640482 FKBP1CQ5VVH2 108 aa31.17■■■□□ 2.58
VEGFA-230ENST00000640482 ANKRD13AQ8IZ07 590 aa31.17■■■□□ 2.58
VEGFA-230ENST00000640482 XAGE2Q96GT9 111 aa31.17■■■□□ 2.58
VEGFA-230ENST00000640482 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.17■■■□□ 2.58
VEGFA-230ENST00000640482 CACNB3P54284 484 aa31.16■■■□□ 2.58
VEGFA-230ENST00000640482 FAM83AQ86UY5 434 aa31.16■■■□□ 2.58
VEGFA-230ENST00000640482 CLMNQ96JQ2 1002 aa31.16■■■□□ 2.58
VEGFA-230ENST00000640482 ZBTB48P10074 688 aaPredicted RBP31.15■■■□□ 2.58
VEGFA-230ENST00000640482 RLBP1P12271 317 aa31.15■■■□□ 2.58
VEGFA-230ENST00000640482 ABHD8Q96I13 439 aa31.15■■■□□ 2.58
VEGFA-230ENST00000640482 NEUROD6Q96NK8 337 aa31.15■■■□□ 2.58
VEGFA-230ENST00000640482 PDS5AQ29RF7 1337 aaKnown RBP31.15■■■□□ 2.58
VEGFA-230ENST00000640482 POLA2Q14181 598 aa31.14■■■□□ 2.58
VEGFA-230ENST00000640482 WNK4Q96J92 1243 aa31.14■■■□□ 2.58
VEGFA-230ENST00000640482 DAGLAQ9Y4D2 1042 aa31.14■■■□□ 2.58
VEGFA-230ENST00000640482 MANSC4A6NHS7 340 aaPredicted RBP31.13■■■□□ 2.57
VEGFA-230ENST00000640482 ZBTB7BO15156 539 aaPredicted RBP31.13■■■□□ 2.57
VEGFA-230ENST00000640482 ATP8B2P98198 1209 aa31.13■■■□□ 2.57
VEGFA-230ENST00000640482 RASGRF1Q13972 1273 aa31.13■■■□□ 2.57
VEGFA-230ENST00000640482 DIXDC1Q155Q3 683 aa31.13■■■□□ 2.57
VEGFA-230ENST00000640482 GORABQ5T7V8 394 aa31.13■■■□□ 2.57
VEGFA-230ENST00000640482 CDAN1Q8IWY9 1227 aa31.13■■■□□ 2.57
VEGFA-230ENST00000640482 CASP8AP2Q9UKL3 1982 aa31.12■■■□□ 2.57
VEGFA-230ENST00000640482 INHBEP58166 350 aa31.12■■■□□ 2.57
VEGFA-230ENST00000640482 SSH3Q8TE77 659 aa31.12■■■□□ 2.57
VEGFA-230ENST00000640482 HOOK2Q96ED9 719 aa31.12■■■□□ 2.57
VEGFA-230ENST00000640482 C1orf115Q9H7X2 142 aa31.12■■■□□ 2.57
VEGFA-230ENST00000640482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.11■■■□□ 2.57
VEGFA-230ENST00000640482 MS4A1P11836 297 aa31.1■■■□□ 2.57
VEGFA-230ENST00000640482 OS9Q13438 667 aaPredicted RBP31.1■■■□□ 2.57
VEGFA-230ENST00000640482 DGKZQ13574 1117 aa31.1■■■□□ 2.57
VEGFA-230ENST00000640482 SPTY2D1Q68D10 685 aaPredicted RBP31.1■■■□□ 2.57
VEGFA-230ENST00000640482 MCOLN1Q9GZU1 580 aa31.1■■■□□ 2.57
VEGFA-230ENST00000640482 RPAP1Q9BWH6 1393 aaPredicted RBP31.09■■■□□ 2.57
VEGFA-230ENST00000640482 ABCF2Q9UG63 623 aa31.09■■■□□ 2.57
VEGFA-230ENST00000640482 TBC1D8O95759 1140 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms