RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 MPHOSPH8Q99549 860 aa17.48■□□□□ 0.39
HLA-C-210ENST00000640219 CSADQ9Y600 493 aa17.48■□□□□ 0.39
HLA-C-210ENST00000640219 CETPP11597 493 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 FKBP1AP62942 108 aaKnown RBP17.47■□□□□ 0.39
HLA-C-210ENST00000640219 CCDC27Q2M243 656 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 RAET1EQ8TD07 263 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 ZCCHC17Q9NP64 241 aaKnown RBP17.47■□□□□ 0.39
HLA-C-210ENST00000640219 SRRDQ9UH36 339 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
HLA-C-210ENST00000640219 BTBD19C9JJ37 291 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.39
HLA-C-210ENST00000640219 HOXD10P28358 340 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
HLA-C-210ENST00000640219 CHRNDQ07001 517 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 CDAN1Q8IWY9 1227 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■□□□□ 10.1
HLA-C-210ENST00000640219 TEPSINQ96N21 525 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
HLA-C-210ENST00000640219 ZNF70Q9UC06 446 aaPredicted RBP17.46■□□□□ 0.39
HLA-C-210ENST00000640219 STAP2Q9UGK3 403 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.39
HLA-C-210ENST00000640219 SPDYE5A6NIY4 337 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 EVI5O60447 810 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 ITGA6P23229 1130 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 CTGFP29279 349 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 PSMC4P43686 418 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 HELBQ8NG08 1087 aaPredicted RBP17.45■□□□□ 0.38
HLA-C-210ENST00000640219 TRIM47Q96LD4 638 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 MYH3P11055 1940 aa17.45■□□□□ 0.38
HLA-C-210ENST00000640219 SNAP23O00161 211 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 IL1R1P14778 569 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 OSBPP22059 807 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 UBXN2AP68543 259 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 C17orf99Q6UX52 265 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
HLA-C-210ENST00000640219 JAG2Q9Y219 1238 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 IRS2Q9Y4H2 1338 aa17.44■□□□□ 0.38
HLA-C-210ENST00000640219 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
HLA-C-210ENST00000640219 FMNL1O95466 1100 aaPredicted RBP17.43■□□□□ 0.38
HLA-C-210ENST00000640219 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
HLA-C-210ENST00000640219 C15orf52Q6ZUT6 534 aaKnown RBP17.43■□□□□ 0.38
HLA-C-210ENST00000640219 DEFB123Q8N688 67 aa17.43■□□□□ 0.38
HLA-C-210ENST00000640219 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
HLA-C-210ENST00000640219 TMEM39BQ9GZU3 492 aa17.43■□□□□ 0.38
HLA-C-210ENST00000640219 CPA4Q9UI42 421 aa17.43■□□□□ 0.38
HLA-C-210ENST00000640219 MYPNQ86TC9 1320 aa17.43■□□□□ 0.38
HLA-C-210ENST00000640219 TAF5LO75529 589 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 NEXNQ0ZGT2 675 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 GPR153Q6NV75 609 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 ERO1BQ86YB8 467 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 STXBP5LQ9Y2K9 1186 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 LAMA3Q16787 3333 aa17.42■□□□□ 0.38
HLA-C-210ENST00000640219 PI4KAP2A4QPH2 592 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 H7C1W4 665 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 IRF6O14896 467 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 TNNI2P48788 182 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
HLA-C-210ENST00000640219 CWF19L2Q2TBE0 894 aaKnown RBP17.41■□□□□ 0.38
HLA-C-210ENST00000640219 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
HLA-C-210ENST00000640219 KSR2Q6VAB6 950 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 G2E3Q7L622 706 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 PI4KAP1Q8N8J0 262 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 COL25A1Q9BXS0 654 aaPredicted RBP17.41■□□□□ 0.38
HLA-C-210ENST00000640219 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
HLA-C-210ENST00000640219 SGPL1O95470 568 aa17.4■□□□□ 0.38
HLA-C-210ENST00000640219 DZIP1LQ8IYY4 767 aaKnown RBP17.4■□□□□ 0.38
HLA-C-210ENST00000640219 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
HLA-C-210ENST00000640219 SERPINA10Q9UK55 444 aa17.4■□□□□ 0.38
HLA-C-210ENST00000640219 NEURL1BA8MQ27 555 aa17.39■□□□□ 0.37
HLA-C-210ENST00000640219 PPIL2Q13356 520 aa17.39■□□□□ 0.37
HLA-C-210ENST00000640219 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
HLA-C-210ENST00000640219 Q7L0L9 218 aa17.39■□□□□ 0.37
HLA-C-210ENST00000640219 ZKSCAN4Q969J2 545 aaPredicted RBP17.39■□□□□ 0.37
HLA-C-210ENST00000640219 PLA2G12BQ9BX93 195 aa17.39■□□□□ 0.37
HLA-C-210ENST00000640219 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
HLA-C-210ENST00000640219 IL16Q14005 1332 aa17.39■□□□□ 0.37
HLA-C-210ENST00000640219 CSF1RP07333 972 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 BMP8BP34820 402 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 PRKCZQ05513 592 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 WDR63Q8IWG1 891 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 SLAIN1Q8ND83 568 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
HLA-C-210ENST00000640219 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 PDHXO00330 501 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 TFRCP02786 760 aaKnown RBP17.37■□□□□ 0.37
HLA-C-210ENST00000640219 MFSD14BQ5SR56 506 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 GDF15Q99988 308 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 MTMR10Q9NXD2 777 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 FAM205AQ6ZU69 1335 aa17.37■□□□□ 0.37
HLA-C-210ENST00000640219 CAPN2P17655 700 aa17.36■□□□□ 0.37
HLA-C-210ENST00000640219 CRKP46108 304 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms