RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
CLN6-215ENST00000636674 SDF4Q9BRK5 362 aa16.92■□□□□ 0.3
CLN6-215ENST00000636674 ISCA1Q9BUE6 129 aa16.92■□□□□ 0.3
CLN6-215ENST00000636674 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
CLN6-215ENST00000636674 ATRNO75882 1429 aa16.92■□□□□ 0.3
CLN6-215ENST00000636674 PRC1O43663 620 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 CCDC150Q8NCX0 1101 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 OGFRQ9NZT2 677 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 AKAP11Q9UKA4 1901 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 A0A1B0GVL5 298 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 SPTLC2O15270 562 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
CLN6-215ENST00000636674 CLIC4Q9Y696 253 aa16.91■□□□□ 0.3
CLN6-215ENST00000636674 KLF18A0A0U1RQI7 1052 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 GOLGA8BA8MQT2 603 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 FGAP02671 866 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 ANTXR2P58335 489 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 NKX1-1Q15270 411 aaPredicted RBP16.9■□□□□ 0.3
CLN6-215ENST00000636674 DPCR1Q3MIW9 517 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 TTC39AQ5SRH9 613 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 FILIP1Q7Z7B0 1213 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 NCOA7Q8NI08 942 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
CLN6-215ENST00000636674 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
CLN6-215ENST00000636674 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.89■□□□□ 0.29
CLN6-215ENST00000636674 A0A087WWV3 80 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 NLRP12P59046 1061 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
CLN6-215ENST00000636674 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
CLN6-215ENST00000636674 CHRNA2Q15822 529 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 XAGE2Q96GT9 111 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 TIGD1Q96MW7 591 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
CLN6-215ENST00000636674 RIC1Q4ADV7 1423 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 CMA1P23946 247 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 KIF23Q02241 960 aaPredicted RBP16.89■□□□□ 0.29
CLN6-215ENST00000636674 AXDND1Q5T1B0 1012 aaPredicted RBP16.89■□□□□ 0.29
CLN6-215ENST00000636674 NGLY1Q96IV0 654 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
CLN6-215ENST00000636674 IKBKBO14920 756 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 A1BGP04217 495 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 FKBP4Q02790 459 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN6-215ENST00000636674 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
CLN6-215ENST00000636674 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 ANO1Q5XXA6 986 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
CLN6-215ENST00000636674 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 DDX41Q9UJV9 622 aaKnown RBP16.88■□□□□ 0.29
CLN6-215ENST00000636674 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
CLN6-215ENST00000636674 PSDA5PKW4 1024 aaPredicted RBP16.87■□□□□ 0.29
CLN6-215ENST00000636674 TUBB4AP04350 444 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 SLC3A2P08195 630 aaKnown RBP16.87■□□□□ 0.29
CLN6-215ENST00000636674 ADORA1P30542 326 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 TPM4P67936 248 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 NCAPHQ15003 741 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 WASHC4Q2M389 1173 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
CLN6-215ENST00000636674 KIF18AQ8NI77 898 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 FAM237AA0A1B0GTK4 181 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 PPFIA3O75145 1194 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 ZNF202O95125 648 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 HAND2P61296 217 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
CLN6-215ENST00000636674 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
CLN6-215ENST00000636674 ZMYM6O95789 1325 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
CLN6-215ENST00000636674 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 CPLX1O14810 134 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 POLR3DP05423 398 aaPredicted RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 CSF1RP07333 972 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 SLC39A14Q15043 492 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 GORABQ5T7V8 394 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 ZNF512BQ96KM6 892 aaPredicted RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 XPO4Q9C0E2 1151 aaKnown RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 PUS7LQ9H0K6 701 aaKnown RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 SLIT2O94813 1529 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 MYH3P11055 1940 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 ZNF213O14771 459 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 GPAA1O43292 621 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 PFKFB1P16118 471 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 SCARF1Q14162 830 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 ZNF592Q92610 1267 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 L2HGDHQ9H9P8 463 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 TUBE1Q9UJT0 475 aa16.86■□□□□ 0.29
CLN6-215ENST00000636674 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
CLN6-215ENST00000636674 PPP6R2O75170 966 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 KIF20AO95235 890 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 ZAP70P43403 619 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 E4F1Q66K89 784 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms