RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 HELLSQ9NRZ9 838 aa17.15■□□□□ 0.34
PHACTR4-209ENST00000633371 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
PHACTR4-209ENST00000633371 USP17L3A6NCW0 530 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 USP17L4A6NCW7 530 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 G3V3G9 751 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 MFAP1P55081 439 aaKnown RBP17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 FKBP1AP62942 108 aaKnown RBP17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 STRIP1Q5VSL9 837 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 USP17L1Q7RTZ2 530 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 TBC1D22AQ8WUA7 517 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 RAD50Q92878 1312 aa17.14■□□□□ 0.33
PHACTR4-209ENST00000633371 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 CYP7A1P22680 504 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 CXCL9Q07325 125 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 CASC1Q6TDU7 716 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 NIM1KQ8IY84 436 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 GMLQ99445 158 aa17.13■□□□□ 0.33
PHACTR4-209ENST00000633371 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 PSMD14O00487 310 aa17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 RAD17O75943 681 aa17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 NAA16Q6N069 864 aaPredicted RBP17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 TIAM2Q8IVF5 1701 aa17.12■□□□□ 0.33
PHACTR4-209ENST00000633371 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 FZD9O00144 591 aa17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 LRRFIP1Q32MZ4 808 aaKnown RBP17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 FOCADQ5VW36 1801 aa17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 CCDC171Q6TFL3 1326 aa17.11■□□□□ 0.33
PHACTR4-209ENST00000633371 IGSF3O75054 1194 aa17.1■□□□□ 0.33
PHACTR4-209ENST00000633371 DYNLL1P63167 89 aaKnown RBP17.1■□□□□ 0.33
PHACTR4-209ENST00000633371 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
PHACTR4-209ENST00000633371 MIGA1Q8NAN2 632 aa17.1■□□□□ 0.33
PHACTR4-209ENST00000633371 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
PHACTR4-209ENST00000633371 GPAA1O43292 621 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 MBD4O95243 580 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 LMNB1P20700 586 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 RSBN1LQ6PCB5 846 aaPredicted RBP17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 DZIP1Q86YF9 867 aaKnown RBP17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 ARMT1Q9H993 441 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 GAKO14976 1311 aa17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
PHACTR4-209ENST00000633371 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 REC8O95072 547 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 SCNN1DP51172 638 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 PCDHAC2Q9Y5I4 1007 aa17.08■□□□□ 0.32
PHACTR4-209ENST00000633371 GPR75-ASB3A0A0A6YYF3 556 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 MAGEB6P1A0A0J9YX57 407 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 PRKAB2O43741 272 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 PPP4CP60510 307 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
PHACTR4-209ENST00000633371 RBM25P49756 843 aaKnown RBP17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 GPR162Q16538 588 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 KCNB2Q92953 911 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 KIF2CQ99661 725 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 C22orf23Q9BZE7 217 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 MYH1P12882 1939 aa17.06■□□□□ 0.32
PHACTR4-209ENST00000633371 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 LDHCP07864 332 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 RHBDL3P58872 404 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 GSTO1P78417 241 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 NECTIN1Q15223 517 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 AATFQ9NY61 560 aaKnown RBP eCLIP17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
PHACTR4-209ENST00000633371 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 NAV1Q8NEY1 1877 aa17.04■□□□□ 0.32
PHACTR4-209ENST00000633371 HSPA4P34932 840 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1641.4 ms