RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 LBX1P52954 281 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 CAP1Q01518 475 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 RASGRF1Q13972 1273 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 PUM3Q15397 648 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 RASAL3Q86YV0 1011 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 ZFPM1Q8IX07 1006 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 DCPSQ96C86 337 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 TMEM39BQ9GZU3 492 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 TTF2Q9UNY4 1162 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 MYH7P12883 1935 aa10.07□□□□□ -0.8
SPTAN1-213ENST00000627809 A0A1B0GUL7 405 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 CIAO1O76071 339 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 CRKP46108 304 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 NFIAQ12857 509 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 APOBEC3HQ6NTF7 200 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 CEP85Q6P2H3 762 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 ZNF70Q9UC06 446 aaPredicted RBP10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 PITPNM2Q9BZ72 1349 aa10.06□□□□□ -0.8
SPTAN1-213ENST00000627809 CENPFP49454 3210 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 RFX7Q2KHR2 1363 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 TCP10L2B9ZVM9 353 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 GNAI2P04899 355 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 CHGBP05060 677 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 RRP1P56182 461 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 PDE3AQ14432 1141 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 DLGAP5Q15398 846 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 SPDYE2Q495Y8 402 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 CCDC102BQ68D86 513 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 MTMR14Q8NCE2 650 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 SSH3Q8TE77 659 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 LPIN2Q92539 896 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 DBNDD2Q9BQY9 259 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 EXOC6BQ9Y2D4 811 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 DAGLAQ9Y4D2 1042 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 MYO3BQ8WXR4 1341 aa10.05□□□□□ -0.8
SPTAN1-213ENST00000627809 MYH1P12882 1939 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 BAZ2AQ9UIF9 1905 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 GNAI3P08754 354 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 SLC10A3P09131 477 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 SLC5A1P13866 664 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 MCAMP43121 646 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 RBM5P52756 815 aaKnown RBP eCLIP10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 FKBP1AP62942 108 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 KIF23Q02241 960 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 RASA3Q14644 834 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 SLFNL1Q499Z3 407 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 RGMBQ6NW40 437 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 ADGRA1Q86SQ6 560 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 DEFB129Q9H1M3 183 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 HDAC5Q9UQL6 1122 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
SPTAN1-213ENST00000627809 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 EVX2Q03828 476 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 EAF2Q96CJ1 260 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 CSRNP1Q96S65 589 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 CHMP4BQ9H444 224 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 HMG20BQ9P0W2 317 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 CEP126Q9P2H0 1117 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 BRCA2P51587 3418 aa10.03□□□□□ -0.8
SPTAN1-213ENST00000627809 ATRNL1Q5VV63 1379 aa10.02□□□□□ -0.8
SPTAN1-213ENST00000627809 APBB1O00213 710 aa10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 USP2O75604 605 aaPredicted RBP10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 CAPN15O75808 1086 aa10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 IFIT1P09914 478 aaKnown RBP10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 ZNF157P51786 506 aaPredicted RBP10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 ANGEL1Q9UNK9 670 aaKnown RBP10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 NAV1Q8NEY1 1877 aa10.02□□□□□ -0.81
SPTAN1-213ENST00000627809 FAM196BA6NMK8 535 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 TCP10Q12799 353 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 TNNI3KQ59H18 835 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 LDLRAD1Q5T700 205 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 CDC42EP5Q6NZY7 148 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 CCDC84Q86UT8 332 aaPredicted RBP10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 VPS37DQ86XT2 251 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 EDC3Q96F86 508 aaKnown RBP10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 NEUROD6Q96NK8 337 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 BCL11AQ9H165 835 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 ANTXR1Q9H6X2 564 aa10.01□□□□□ -0.81
SPTAN1-213ENST00000627809 IL1RAPL2Q9NP60 686 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms