RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 CNOT1A5YKK6 2376 aaKnown RBP4.32□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SNED1Q8TER0 1413 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 MYH14Q7Z406 1995 aaKnown RBP4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CACNA1SQ13698 1873 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 M0R296 226 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 HAX1O00165 279 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 USP17L8P0C7I0 530 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 COL6A1P12109 1028 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PRKAR2AP13861 404 aaKnown RBP4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 GJA5P36382 358 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PBX2P40425 430 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ZNF280AP59817 542 aaPredicted RBP4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 IRF5Q13568 498 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 RSPO4Q2I0M5 234 aaPredicted RBP4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SUPT20HL1Q3ZLR7 823 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CCDC174Q6PII3 467 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 NFATC2IPQ8NCF5 419 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PIK3R5Q8WYR1 880 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 OPTNQ96CV9 577 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 COG3Q96JB2 828 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 MS4A4AQ96JQ5 239 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CRAMP1Q96RY5 1269 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 DBNDD1Q9H9R9 158 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ELP3Q9H9T3 547 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 FZD1Q9UP38 647 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SRPK3Q9UPE1 567 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 LHX6Q9UPM6 363 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ATP11BQ9Y2G3 1177 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ATP6V0A2Q9Y487 856 aa4.31□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ITGB4P16144 1822 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 COL11A2P13942 1736 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ANKRD26Q9UPS8 1709 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 GAKO14976 1311 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 EVC2Q86UK5 1308 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 EP300Q09472 2414 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ST20-MTHFSA0A0A6YYL1 179 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 TNPO2O14787 897 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CETPP11597 493 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 AVPR2P30518 371 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 HOXA10P31260 410 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 MTHFSP49914 203 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 RTP1P59025 263 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 WASHC4Q2M389 1173 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PUS10Q3MIT2 529 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 HDGFL2Q7Z4V5 671 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 FRMD5Q7Z6J6 570 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 APOBEC3FQ8IUX4 373 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 MTMR14Q8NCE2 650 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 AGBL3Q8NEM8 1001 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 KIF12Q96FN5 646 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SLC4A5Q9BY07 1137 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 FAM50BQ9Y247 325 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SSC5DA1L4H1 1573 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ABCA12Q86UK0 2595 aa4.3□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SCN7AQ01118 1682 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 COL4A6Q14031 1691 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CENPJQ9HC77 1338 aaPredicted RBP4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ANKRD31Q8N7Z5 1873 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 GRXCR1A8MXD5 290 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 NBPF26B4DH59 902 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 RIMBP2O15034 1052 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 HMGCRP04035 888 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 VIL1P09327 827 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 IL9P15248 144 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CRY2Q49AN0 593 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PTCRAQ6ISU1 281 aaPredicted RBP4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 CLEC4GQ6UXB4 293 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 TRIM67Q6ZTA4 783 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 OGFOD1Q8N543 542 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 EDAQ92838 391 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 COA7Q96BR5 231 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 NKX2-4Q9H2Z4 354 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 NIP7Q9Y221 180 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 MTCH2Q9Y6C9 303 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 DOPEY1Q5JWR5 2465 aa4.29□□□□□ -1.72
SCARNA15.3-201ENST00000626315 C5orf42Q9H799 3197 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 TEP1Q99973 2627 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ZNF536O15090 1300 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SH3TC1Q8TE82 1336 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 BTBD19C9JJ37 291 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 GALR2O43603 387 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ECE2O60344 883 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 BBOX1O75936 387 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PROS1P07225 676 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PRR29P0C7W0 189 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 POU3F3P20264 500 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 FBLN1P23142 703 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 IL6STP40189 918 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 ATXN1P54253 815 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 FPGSQ05932 587 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 LEXMQ3ZCV2 418 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 HSP90AB2PQ58FF8 381 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 PPP2R2DQ66LE6 453 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 DZIP3Q86Y13 1208 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 NYXQ9GZU5 481 aa4.28□□□□□ -1.72
SCARNA15.3-201ENST00000626315 MUTYHQ9UIF7 546 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms