RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
VARS2-213ENST00000625423 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 SYNE3Q6ZMZ3 975 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 RIPOR2Q9Y4F9 1068 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 NEMFO60524 1076 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 RBM6P78332 1123 aaKnown RBP13.1□□□□□ -0.31
VARS2-213ENST00000625423 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 GREM2Q9H772 168 aa13.1□□□□□ -0.31
VARS2-213ENST00000625423 ITGA6P23229 1130 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
VARS2-213ENST00000625423 ZRSR1Q15695 479 aaKnown RBP13.09□□□□□ -0.31
VARS2-213ENST00000625423 HLFQ16534 295 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 SLC9C2Q5TAH2 1124 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.312e-8■■■■■ 49.9
VARS2-213ENST00000625423 NBPF3Q9H094 633 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 NEDD4P46934 1319 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 BIN1O00499 593 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 ZNF202O95125 648 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 RXRAP19793 462 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 ADD2P35612 726 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 CCZ1BP86790 482 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
VARS2-213ENST00000625423 TRDNQ13061 729 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 PAXBP1Q9Y5B6 917 aa13.09□□□□□ -0.31
VARS2-213ENST00000625423 PAPPAQ13219 1627 aa13.08□□□□□ -0.31
VARS2-213ENST00000625423 APPP05067 770 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 CBX1P83916 185 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.32
VARS2-213ENST00000625423 CCDC112Q8NEF3 446 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 ABCC12Q96J65 1359 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
VARS2-213ENST00000625423 SLC3A2P08195 630 aaKnown RBP13.08□□□□□ -0.32
VARS2-213ENST00000625423 MARCKSP29966 332 aaPredicted RBP13.08□□□□□ -0.32
VARS2-213ENST00000625423 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.32
VARS2-213ENST00000625423 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 PIGBQ92521 554 aa13.08□□□□□ -0.32
VARS2-213ENST00000625423 TRMT1Q9NXH9 659 aaKnown RBP13.08□□□□□ -0.32
VARS2-213ENST00000625423 GIGYF2Q6Y7W6 1299 aaKnown RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 ANGEL1Q9UNK9 670 aaKnown RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 MAP3K15Q6ZN16 1313 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 WDHD1O75717 1129 aaPredicted RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 PFKFB1P16118 471 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 NAA30Q147X3 362 aaPredicted RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
VARS2-213ENST00000625423 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 METAP2P50579 478 aaKnown RBP eCLIP13.07□□□□□ -0.32
VARS2-213ENST00000625423 ALG1Q9BT22 464 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
VARS2-213ENST00000625423 SMC2O95347 1197 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 STARD3NLO95772 234 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 CMA1P23946 247 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 PTPN14Q15678 1187 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
VARS2-213ENST00000625423 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 B4E1Z4 1266 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.327e-8■□□□□ 9.4
VARS2-213ENST00000625423 CDC27P30260 824 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 CTSWP56202 376 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 PHKBQ93100 1093 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 XPO4Q9C0E2 1151 aaKnown RBP13.06□□□□□ -0.32
VARS2-213ENST00000625423 IFNKQ9P0W0 207 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 MROH7-TTC4A0A0A0MT08 1334 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 CDHR2Q9BYE9 1310 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 ZNF532Q9HCE3 1301 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 SH2B2O14492 632 aaPredicted RBP13.06□□□□□ -0.32
VARS2-213ENST00000625423 NLRP12P59046 1061 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 VGLL2Q8N8G2 317 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
VARS2-213ENST00000625423 PHKA1P46020 1223 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
VARS2-213ENST00000625423 KRT40Q6A162 431 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 NYAP1Q6ZVC0 841 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms