RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 ATP2B4P23634 1241 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
ATRX-213ENST00000624032 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
ATRX-213ENST00000624032 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 MCM2P49736 904 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 MPNDQ8N594 471 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
ATRX-213ENST00000624032 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 COL1A1P02452 1464 aaPredicted RBP13.7□□□□□ -0.22
ATRX-213ENST00000624032 BRD1O95696 1058 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 NEK4P51957 841 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 DNTTIP2Q5QJE6 756 aaKnown RBP13.7□□□□□ -0.22
ATRX-213ENST00000624032 MYRIPQ8NFW9 859 aa13.7□□□□□ -0.22
ATRX-213ENST00000624032 C21orf2O43822 256 aa13.69□□□□□ -0.22
ATRX-213ENST00000624032 DPP8Q6V1X1 898 aaPredicted RBP13.69□□□□□ -0.22
ATRX-213ENST00000624032 SGSM2O43147 1006 aa13.69□□□□□ -0.22
ATRX-213ENST00000624032 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
ATRX-213ENST00000624032 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
ATRX-213ENST00000624032 ANO2Q9NQ90 1003 aa13.69□□□□□ -0.22
ATRX-213ENST00000624032 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
ATRX-213ENST00000624032 LTBP1Q14766 1721 aa13.69□□□□□ -0.22
ATRX-213ENST00000624032 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
ATRX-213ENST00000624032 C7orf43Q8WVR3 580 aa13.68□□□□□ -0.22
ATRX-213ENST00000624032 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
ATRX-213ENST00000624032 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
ATRX-213ENST00000624032 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
ATRX-213ENST00000624032 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
ATRX-213ENST00000624032 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
ATRX-213ENST00000624032 ZNF589Q86UQ0 364 aaPredicted RBP13.67□□□□□ -0.22
ATRX-213ENST00000624032 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
ATRX-213ENST00000624032 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
ATRX-213ENST00000624032 WASHC4Q2M389 1173 aa13.67□□□□□ -0.22
ATRX-213ENST00000624032 ABCF2Q9UG63 623 aa13.67□□□□□ -0.22
ATRX-213ENST00000624032 DLEC1Q9Y238 1755 aa13.67□□□□□ -0.22
ATRX-213ENST00000624032 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
ATRX-213ENST00000624032 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 HIP1O00291 1037 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 PTH1RQ03431 593 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 CUL4AQ13619 759 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
ATRX-213ENST00000624032 SLC9C2Q5TAH2 1124 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 C15orf52Q6ZUT6 534 aaKnown RBP13.66□□□□□ -0.22
ATRX-213ENST00000624032 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 INTS4Q96HW7 963 aaKnown RBP13.66□□□□□ -0.22
ATRX-213ENST00000624032 CD209Q9NNX6 404 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 DENND2AQ9ULE3 1009 aa13.66□□□□□ -0.22
ATRX-213ENST00000624032 TGFB2P61812 414 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 PIBF1Q8WXW3 757 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 M0R2C6 588 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 MCCP23508 829 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 ZMYM1Q5SVZ6 1142 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 NLGN2Q8NFZ4 835 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 TDRD7Q8NHU6 1098 aaKnown RBP13.65□□□□□ -0.22
ATRX-213ENST00000624032 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
ATRX-213ENST00000624032 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 LRP2BPQ9P2M1 347 aa13.65□□□□□ -0.22
ATRX-213ENST00000624032 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.23
ATRX-213ENST00000624032 SPON1Q9HCB6 807 aa13.65□□□□□ -0.23
ATRX-213ENST00000624032 PIM2Q9P1W9 311 aa13.65□□□□□ -0.23
ATRX-213ENST00000624032 MED23Q9ULK4 1368 aa13.65□□□□□ -0.23
ATRX-213ENST00000624032 PDE6AP16499 860 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
ATRX-213ENST00000624032 MCMDC2Q4G0Z9 681 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
ATRX-213ENST00000624032 MAGEB6Q8N7X4 407 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
ATRX-213ENST00000624032 MYH7P12883 1935 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 MAST3O60307 1309 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 ZNF532Q9HCE3 1301 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 ADD2P35612 726 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 CHD4Q14839 1912 aa13.64□□□□□ -0.23
ATRX-213ENST00000624032 GTF2F1P35269 517 aaKnown RBP eCLIP13.63□□□□□ -0.236e-9■■■■■ 35.5
ATRX-213ENST00000624032 DMTNQ08495 405 aa13.63□□□□□ -0.23
ATRX-213ENST00000624032 GRIK5Q16478 980 aa13.63□□□□□ -0.23
ATRX-213ENST00000624032 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.63□□□□□ -0.23
ATRX-213ENST00000624032 SEMA3EO15041 775 aa13.63□□□□□ -0.23
ATRX-213ENST00000624032 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
ATRX-213ENST00000624032 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
ATRX-213ENST00000624032 TCRBV5S4A2TA0A5A2 114 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 IL1R1P14778 569 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 ANAPC15P60006 121 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 VPS53Q5VIR6 699 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 PALD1Q9ULE6 856 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 PRDX5P30044 214 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 AOC3Q16853 763 aa13.62□□□□□ -0.23
ATRX-213ENST00000624032 ZNF384Q8TF68 577 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 324.1 ms