RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 STXBP4Q6ZWJ1 553 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
GGA3-223ENST00000621870 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 MMRN2Q9H8L6 949 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
GGA3-223ENST00000621870 TMOD4Q9NZQ9 345 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 A2ML1A8K2U0 1454 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 STAT6P42226 847 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 ANKARQ7Z5J8 1434 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
GGA3-223ENST00000621870 ATP2B4P23634 1241 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 DNA2P51530 1060 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 USP25Q9UHP3 1055 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
GGA3-223ENST00000621870 SGSM2O43147 1006 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 MCM7P33993 719 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 TFAP4Q01664 338 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 LETM2Q2VYF4 491 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 KRT79Q5XKE5 535 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 GIMAP6Q6P9H5 292 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 RUFY3Q7L099 469 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 KCNG4Q8TDN1 519 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 TRIM47Q96LD4 638 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 PLIN2Q99541 437 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 USP26Q9BXU7 913 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 ANGEL1Q9UNK9 670 aaKnown RBP10.56□□□□□ -0.72
GGA3-223ENST00000621870 CNPY2Q9Y2B0 182 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 NEBLO76041 1014 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 UBE2HP62256 183 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 ASIC1P78348 528 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 C8orf34Q49A92 452 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
GGA3-223ENST00000621870 PDE8BO95263 885 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 ATP5JP18859 108 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 PHKA1P46020 1223 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 TXLNBQ8N3L3 684 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 CERKQ8TCT0 537 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 BEGAINQ9BUH8 593 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 PALLDQ8WX93 1383 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 ARHGAP31Q2M1Z3 1444 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 MACROD2A1Z1Q3 448 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 ZNF526Q8TF50 670 aaPredicted RBP10.55□□□□□ -0.72
GGA3-223ENST00000621870 SDR42E1Q8WUS8 393 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 DHX58Q96C10 678 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 PUF60Q9UHX1 559 aaKnown RBP10.55□□□□□ -0.72
GGA3-223ENST00000621870 MAP3K4Q9Y6R4 1608 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 hCG_1642624A0A1W2PR95 340 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 SLC27A2O14975 620 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 SPTLC2O15270 562 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 FAM47AQ5JRC9 791 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 KANK3Q6NY19 840 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 CCDC150Q8NCX0 1101 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 MYO6Q9UM54 1294 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 ZNF804BA4D1E1 1349 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 CDR1P51861 262 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 SPA17Q15506 151 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 USP48Q86UV5 1035 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 SMCR8Q8TEV9 937 aaPredicted RBP10.55□□□□□ -0.72
GGA3-223ENST00000621870 MRPS27Q92552 414 aaKnown RBP10.55□□□□□ -0.72
GGA3-223ENST00000621870 SEC62Q99442 399 aaKnown RBP10.55□□□□□ -0.72
GGA3-223ENST00000621870 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
GGA3-223ENST00000621870 DBNDD1Q9H9R9 158 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 DACT1Q9NYF0 836 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 GINS2Q9Y248 185 aa10.55□□□□□ -0.72
GGA3-223ENST00000621870 ATP7BP35670 1465 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 ARAP3Q8WWN8 1544 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 KCNQ2O43526 872 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 PDE6AP16499 860 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 ERFEQ4G0M1 354 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 TMEM87BQ96K49 555 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 PYM1Q9BRP8 204 aaKnown RBP10.54□□□□□ -0.72
GGA3-223ENST00000621870 CLIP2Q9UDT6 1046 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 KDRP35968 1356 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 MYOM2P54296 1465 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 NLRP10Q86W26 655 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 ACBD3Q9H3P7 528 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 N4BP3O15049 544 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 ZBTB7AO95365 584 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 CA8P35219 290 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 KRT2P35908 639 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 RBM6P78332 1123 aaKnown RBP10.54□□□□□ -0.72
GGA3-223ENST00000621870 RRAGBQ5VZM2 374 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 OTUD7BQ6GQQ9 843 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 TAF4BQ92750 862 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 HOOK2Q96ED9 719 aa10.54□□□□□ -0.72
GGA3-223ENST00000621870 UIMC1Q96RL1 719 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 431.6 ms