RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 LRRC24Q50LG9 513 aa17.5■□□□□ 0.39
MUC1-222ENST00000610468 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
MUC1-222ENST00000610468 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
MUC1-222ENST00000610468 E9PSI1 815 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 PDE8BO95263 885 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 METTL24Q5JXM2 366 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 CDAN1Q8IWY9 1227 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 TBC1D22AQ8WUA7 517 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 USP44Q9H0E7 712 aa17.49■□□□□ 0.39
MUC1-222ENST00000610468 PDE4DIPQ5VU43 2346 aa17.48■□□□□ 0.39
MUC1-222ENST00000610468 CAVIN4Q5BKX8 364 aa17.48■□□□□ 0.39
MUC1-222ENST00000610468 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
MUC1-222ENST00000610468 CRHR2Q13324 411 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
MUC1-222ENST00000610468 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.47■□□□□ 0.39
MUC1-222ENST00000610468 OTOP1Q7RTM1 612 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.47■□□□□ 0.39
MUC1-222ENST00000610468 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 PTPN18Q99952 460 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
MUC1-222ENST00000610468 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
MUC1-222ENST00000610468 TCP10L2B9ZVM9 353 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 FGFR2P21802 821 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 TNNI2P48788 182 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.39
MUC1-222ENST00000610468 KLHDC4Q8TBB5 520 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 ZDHHC15Q96MV8 337 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 ELP3Q9H9T3 547 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 SUGT1Q9Y2Z0 365 aa17.46■□□□□ 0.39
MUC1-222ENST00000610468 RFX5P48382 616 aaPredicted RBP17.45■□□□□ 0.38
MUC1-222ENST00000610468 BCAMP50895 628 aa17.45■□□□□ 0.38
MUC1-222ENST00000610468 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
MUC1-222ENST00000610468 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
MUC1-222ENST00000610468 VGLL4Q14135 290 aa17.45■□□□□ 0.38
MUC1-222ENST00000610468 PRPF38BQ5VTL8 546 aaKnown RBP17.45■□□□□ 0.38
MUC1-222ENST00000610468 FKBP1CQ5VVH2 108 aa17.45■□□□□ 0.38
MUC1-222ENST00000610468 ERO1AQ96HE7 468 aa17.45■□□□□ 0.38
MUC1-222ENST00000610468 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
MUC1-222ENST00000610468 TRIM17Q9Y577 477 aa17.45■□□□□ 0.38
MUC1-222ENST00000610468 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
MUC1-222ENST00000610468 APOBEC3HQ6NTF7 200 aaKnown RBP17.44■□□□□ 0.38
MUC1-222ENST00000610468 MIER1Q8N108 512 aa17.44■□□□□ 0.38
MUC1-222ENST00000610468 MAST3O60307 1309 aa17.44■□□□□ 0.38
MUC1-222ENST00000610468 OTOFQ9HC10 1997 aa17.43■□□□□ 0.38
MUC1-222ENST00000610468 EYA2O00167 538 aa17.43■□□□□ 0.38
MUC1-222ENST00000610468 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
MUC1-222ENST00000610468 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
MUC1-222ENST00000610468 FAM83AQ86UY5 434 aa17.43■□□□□ 0.38
MUC1-222ENST00000610468 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
MUC1-222ENST00000610468 BRI3BPQ8WY22 251 aa17.43■□□□□ 0.38
MUC1-222ENST00000610468 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
MUC1-222ENST00000610468 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
MUC1-222ENST00000610468 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
MUC1-222ENST00000610468 CACNB3P54284 484 aa17.42■□□□□ 0.38
MUC1-222ENST00000610468 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
MUC1-222ENST00000610468 CSADQ9Y600 493 aa17.42■□□□□ 0.38
MUC1-222ENST00000610468 SPDYE5A6NIY4 337 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 GTF2A2P52657 109 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 CAP1Q01518 475 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 SP3Q02447 781 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 INTS3Q68E01 1043 aaKnown RBP17.41■□□□□ 0.38
MUC1-222ENST00000610468 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
MUC1-222ENST00000610468 CD99L2Q8TCZ2 262 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 LPIN2Q92539 896 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 ARMC5Q96C12 935 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 TMOD2Q9NZR1 351 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
MUC1-222ENST00000610468 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
MUC1-222ENST00000610468 CCL15Q16663 113 aa17.4■□□□□ 0.38
MUC1-222ENST00000610468 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
MUC1-222ENST00000610468 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
MUC1-222ENST00000610468 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
MUC1-222ENST00000610468 CIAO1O76071 339 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 SLC5A1P13866 664 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 WDR66Q8TBY9 1149 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 ZCCHC17Q9NP64 241 aaKnown RBP17.39■□□□□ 0.37
MUC1-222ENST00000610468 SMC4Q9NTJ3 1288 aa17.39■□□□□ 0.37
MUC1-222ENST00000610468 ZBTB22O15209 634 aa17.38■□□□□ 0.37
MUC1-222ENST00000610468 FAM43AQ8N2R8 423 aa17.38■□□□□ 0.37
MUC1-222ENST00000610468 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
MUC1-222ENST00000610468 ZFYVE28Q9HCC9 887 aa17.38■□□□□ 0.37
MUC1-222ENST00000610468 CENPFP49454 3210 aa17.37■□□□□ 0.37
MUC1-222ENST00000610468 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
MUC1-222ENST00000610468 TAF1CQ15572 869 aaPredicted RBP17.37■□□□□ 0.37
MUC1-222ENST00000610468 MKI67P46013 3256 aaKnown RBP17.37■□□□□ 0.37
MUC1-222ENST00000610468 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
MUC1-222ENST00000610468 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
MUC1-222ENST00000610468 CETPP11597 493 aa17.36■□□□□ 0.37
MUC1-222ENST00000610468 PPIL2Q13356 520 aa17.36■□□□□ 0.37
MUC1-222ENST00000610468 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms