RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 BTBD11A6QL63 1104 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 GTF2E1P29083 439 aaPredicted RBP7.41□□□□□ -1.22
HDDC2-205ENST00000608456 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 SCRN1Q12765 414 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 ARHGAP29Q52LW3 1261 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 TRIM65Q6PJ69 517 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 TRIML1Q8N9V2 468 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 KBTBD3Q8NAB2 608 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 GOLGA5Q8TBA6 731 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 IPO4Q8TEX9 1081 aaKnown RBP7.41□□□□□ -1.22
HDDC2-205ENST00000608456 EPAS1Q99814 870 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 ARID3AQ99856 593 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 UTP14AQ9BVJ6 771 aaKnown RBP7.41□□□□□ -1.22
HDDC2-205ENST00000608456 NAA15Q9BXJ9 866 aaKnown RBP7.41□□□□□ -1.22
HDDC2-205ENST00000608456 ARFGAP3Q9NP61 516 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 SCUBE2Q9NQ36 999 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.41□□□□□ -1.22
HDDC2-205ENST00000608456 ZNF446Q9NWS9 450 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 CHPF2Q9P2E5 772 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 DACH1Q9UI36 760 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 PCDHA7Q9UN72 937 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 MAP3K2Q9Y2U5 619 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 USP16Q9Y5T5 823 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 EID1Q9Y6B2 187 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 LMO7Q8WWI1 1683 aa7.41□□□□□ -1.22
HDDC2-205ENST00000608456 KDM4FA0A1W2PPD8 638 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 USP27XA6NNY8 438 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 A6NNZ2 444 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 SPTLC2O15270 562 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ERLIN1O75477 346 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ZFYP08048 801 aaPredicted RBP7.4□□□□□ -1.22
HDDC2-205ENST00000608456 POTEJP0CG39 1038 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 USP5P45974 858 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ME1P48163 572 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 MYL5Q02045 173 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 NCAPHQ15003 741 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 SLC39A14Q15043 492 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.22
HDDC2-205ENST00000608456 DOK7Q18PE1 504 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ERCC6LQ2NKX8 1250 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 TUBB8Q3ZCM7 444 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 NOM1Q5C9Z4 860 aaKnown RBP7.4□□□□□ -1.22
HDDC2-205ENST00000608456 KANK3Q6NY19 840 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ARMCX5Q6P1M9 558 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 FAM173BQ6P4H8 233 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 SYNE3Q6ZMZ3 975 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 RSRC2Q7L4I2 434 aaKnown RBP7.4□□□□□ -1.22
HDDC2-205ENST00000608456 HOMER1Q86YM7 354 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 VSTM4Q8IW00 320 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 AOPEPQ8N6M6 819 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 CCDC34Q96HJ3 373 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 USP28Q96RU2 1077 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 XPO4Q9C0E2 1151 aaKnown RBP7.4□□□□□ -1.22
HDDC2-205ENST00000608456 SLC24A3Q9HC58 644 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 MYO1AQ9UBC5 1043 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 MKRN1Q9UHC7 482 aaKnown RBP7.4□□□□□ -1.22
HDDC2-205ENST00000608456 PCDHGA4Q9Y5G9 962 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ABCC12Q96J65 1359 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 ARHGAP23Q9P227 1491 aa7.4□□□□□ -1.22
HDDC2-205ENST00000608456 SPEF2Q9C093 1822 aa7.4□□□□□ -1.23
HDDC2-205ENST00000608456 MYH15Q9Y2K3 1946 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 UBR1Q8IWV7 1749 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 ERBB3P21860 1342 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 GRXCR2A6NFK2 248 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 MAP2K7O14733 419 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 RNMTO43148 476 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 EIF3JO75822 258 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 ZNF202O95125 648 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 CYP21A2P08686 494 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 HSP90B1P14625 803 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 EIF2S2P20042 333 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 MCM3P25205 808 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 PDIA3P30101 505 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 HNRNPH2P55795 449 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 UBASH3AP57075 661 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 FANCCQ00597 558 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 STK38Q15208 465 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 TNNI3KQ59H18 835 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 ZMYM1Q5SVZ6 1142 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 CC2D1AQ6P1N0 951 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 OLFM4Q6UX06 510 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 SYT10Q6XYQ8 523 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 TMC6Q7Z403 805 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 REXO1L1PQ8IX06 675 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 GOLGA6L1Q8N7Z2 621 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 CEP112Q8N8E3 955 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 ERCC4Q92889 916 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 CCDC51Q96ER9 411 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 KAZALD1Q96I82 304 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 FAM107BQ9H098 131 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 BOLA2Q9H3K6 86 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 ACBD3Q9H3P7 528 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 GOLPH3LQ9H4A5 285 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 YY1AP1Q9H869 796 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 TRMT1Q9NXH9 659 aaKnown RBP7.39□□□□□ -1.23
HDDC2-205ENST00000608456 IFNKQ9P0W0 207 aa7.39□□□□□ -1.23
HDDC2-205ENST00000608456 RAB21Q9UL25 225 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms