RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 MAST3O60307 1309 aa28.22■■■□□ 2.11
SNX5-217ENST00000606557 CFAP100Q494V2 611 aa28.22■■■□□ 2.11
SNX5-217ENST00000606557 PCDHAC2Q9Y5I4 1007 aa28.22■■■□□ 2.11
SNX5-217ENST00000606557 HDLBPQ00341 1268 aaKnown RBP28.21■■■□□ 2.11
SNX5-217ENST00000606557 DLGAP5Q15398 846 aa28.21■■■□□ 2.11
SNX5-217ENST00000606557 CNTROBQ8N137 903 aa28.21■■■□□ 2.11
SNX5-217ENST00000606557 GGA3Q9NZ52 723 aa28.21■■■□□ 2.11
SNX5-217ENST00000606557 ITGBL1O95965 494 aaPredicted RBP28.2■■■□□ 2.1
SNX5-217ENST00000606557 IGHDP01880 384 aa28.2■■■□□ 2.1
SNX5-217ENST00000606557 LDHBP07195 334 aaKnown RBP28.2■■■□□ 2.1
SNX5-217ENST00000606557 CRKP46108 304 aa28.2■■■□□ 2.1
SNX5-217ENST00000606557 SNRKQ9NRH2 765 aa28.2■■■□□ 2.1
SNX5-217ENST00000606557 SPDYE2BA6NHP3 402 aa28.19■■■□□ 2.1
SNX5-217ENST00000606557 SPDYE6P0CI01 402 aa28.19■■■□□ 2.1
SNX5-217ENST00000606557 ABCF2Q9UG63 623 aa28.19■■■□□ 2.1
SNX5-217ENST00000606557 RBM5P52756 815 aaKnown RBP eCLIP28.18■■■□□ 2.1
SNX5-217ENST00000606557 ANGEL2Q5VTE6 544 aaKnown RBP28.18■■■□□ 2.1
SNX5-217ENST00000606557 SMC5Q8IY18 1101 aa28.18■■■□□ 2.1
SNX5-217ENST00000606557 TEKT1Q969V4 418 aa28.18■■■□□ 2.1
SNX5-217ENST00000606557 MRIQ9BWK5 157 aa28.18■■■□□ 2.1
SNX5-217ENST00000606557 PASKQ96RG2 1323 aa28.18■■■□□ 2.1
SNX5-217ENST00000606557 PITPNM2Q9BZ72 1349 aa28.18■■■□□ 2.1
SNX5-217ENST00000606557 ZAP70P43403 619 aa28.17■■■□□ 2.1
SNX5-217ENST00000606557 SPTY2D1Q68D10 685 aaPredicted RBP28.17■■■□□ 2.1
SNX5-217ENST00000606557 TBC1D9Q6ZT07 1266 aa28.17■■■□□ 2.1
SNX5-217ENST00000606557 DCPSQ96C86 337 aaKnown RBP28.17■■■□□ 2.1
SNX5-217ENST00000606557 PRMT6Q96LA8 375 aaPredicted RBP28.17■■■□□ 2.1
SNX5-217ENST00000606557 AOX1Q06278 1338 aa28.17■■■□□ 2.1
SNX5-217ENST00000606557 CYP2E1P05181 493 aaPredicted RBP28.16■■■□□ 2.1
SNX5-217ENST00000606557 HHIPL2Q6UWX4 724 aa28.16■■■□□ 2.1
SNX5-217ENST00000606557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.16■■■□□ 2.1
SNX5-217ENST00000606557 GLIS2Q9BZE0 524 aaPredicted RBP28.16■■■□□ 2.1
SNX5-217ENST00000606557 DIXDC1Q155Q3 683 aa28.15■■■□□ 2.1
SNX5-217ENST00000606557 ERICH6Q7L0X2 663 aa28.15■■■□□ 2.1
SNX5-217ENST00000606557 CDC37L1Q7L3B6 337 aa28.15■■■□□ 2.1
SNX5-217ENST00000606557 MYH7P12883 1935 aa28.14■■■□□ 2.1
SNX5-217ENST00000606557 ANKRD45Q5TZF3 282 aa28.14■■■□□ 2.1
SNX5-217ENST00000606557 KRT26Q7Z3Y9 468 aa28.14■■■□□ 2.1
SNX5-217ENST00000606557 ZDHHC15Q96MV8 337 aa28.14■■■□□ 2.1
SNX5-217ENST00000606557 NDUFB9Q9Y6M9 179 aa28.14■■■□□ 2.1
SNX5-217ENST00000606557 TRAF5O00463 557 aa28.13■■■□□ 2.09
SNX5-217ENST00000606557 ATP5JP18859 108 aa28.13■■■□□ 2.09
SNX5-217ENST00000606557 DZIP1Q86YF9 867 aaKnown RBP28.13■■■□□ 2.09
SNX5-217ENST00000606557 ADM5C9JUS6 153 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 MYO1BO43795 1136 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 MECOMQ03112 1051 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 USP48Q86UV5 1035 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 SULF1Q8IWU6 871 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 ZNF384Q8TF68 577 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 PIH1D3Q9NQM4 214 aaKnown RBP28.12■■■□□ 2.09
SNX5-217ENST00000606557 DAGLAQ9Y4D2 1042 aa28.12■■■□□ 2.09
SNX5-217ENST00000606557 FMR1Q06787 632 aaKnown RBP eCLIP28.11■■■□□ 2.09
SNX5-217ENST00000606557 APOBEC3HQ6NTF7 200 aaKnown RBP28.11■■■□□ 2.09
SNX5-217ENST00000606557 NSUN4Q96CB9 384 aaKnown RBP28.11■■■□□ 2.09
SNX5-217ENST00000606557 ECHDC1Q9NTX5 307 aa28.11■■■□□ 2.09
SNX5-217ENST00000606557 RAI14Q9P0K7 980 aa28.11■■■□□ 2.09
SNX5-217ENST00000606557 LRP2BPQ9P2M1 347 aa28.11■■■□□ 2.09
SNX5-217ENST00000606557 ZBTB47Q9UFB7 747 aaPredicted RBP28.11■■■□□ 2.09
SNX5-217ENST00000606557 CLRN2A0PK11 232 aa28.1■■■□□ 2.09
SNX5-217ENST00000606557 HSPA6P17066 643 aa28.1■■■□□ 2.09
SNX5-217ENST00000606557 SPDYE2Q495Y8 402 aa28.1■■■□□ 2.09
SNX5-217ENST00000606557 APOBEC3FQ8IUX4 373 aaKnown RBP28.1■■■□□ 2.09
SNX5-217ENST00000606557 OTUD7AQ8TE49 926 aaPredicted RBP28.1■■■□□ 2.09
SNX5-217ENST00000606557 GPATCH3Q96I76 525 aa28.1■■■□□ 2.09
SNX5-217ENST00000606557 ANTXR1Q9H6X2 564 aa28.1■■■□□ 2.09
SNX5-217ENST00000606557 TDRD3Q9H7E2 651 aaKnown RBP28.1■■■□□ 2.09
SNX5-217ENST00000606557 SCAF8Q9UPN6 1271 aaKnown RBP28.1■■■□□ 2.09
SNX5-217ENST00000606557 GAKO14976 1311 aa28.1■■■□□ 2.09
SNX5-217ENST00000606557 DLK2Q6UY11 383 aa28.09■■■□□ 2.09
SNX5-217ENST00000606557 BOLA2Q9H3K6 86 aa28.09■■■□□ 2.09
SNX5-217ENST00000606557 ZNF70Q9UC06 446 aaPredicted RBP28.09■■■□□ 2.09
SNX5-217ENST00000606557 SALL3Q9BXA9 1300 aa28.09■■■□□ 2.09
SNX5-217ENST00000606557 APLP1P51693 650 aa28.08■■■□□ 2.09
SNX5-217ENST00000606557 B4GALNT3Q6L9W6 998 aa28.08■■■□□ 2.09
SNX5-217ENST00000606557 SLF2Q8IX21 1173 aa28.08■■■□□ 2.09
SNX5-217ENST00000606557 DNAJC2Q99543 621 aaKnown RBP28.08■■■□□ 2.09
SNX5-217ENST00000606557 HAUS7Q99871 368 aa28.08■■■□□ 2.09
SNX5-217ENST00000606557 MROH7-TTC4A0A0A0MT08 1334 aa28.08■■■□□ 2.09
SNX5-217ENST00000606557 CDK5RAP2Q96SN8 1893 aa28.08■■■□□ 2.09
SNX5-217ENST00000606557 IGSF3O75054 1194 aa28.07■■■□□ 2.08
SNX5-217ENST00000606557 NUCB1Q02818 461 aa28.07■■■□□ 2.08
SNX5-217ENST00000606557 TSHZ3Q63HK5 1081 aa28.07■■■□□ 2.08
SNX5-217ENST00000606557 FAM163AQ96GL9 167 aaPredicted RBP28.07■■■□□ 2.08
SNX5-217ENST00000606557 VEZTQ9HBM0 779 aa28.07■■■□□ 2.08
SNX5-217ENST00000606557 TTC41PQ6P2S7 1318 aa28.07■■■□□ 2.08
SNX5-217ENST00000606557 GSTO1P78417 241 aa28.06■■■□□ 2.08
SNX5-217ENST00000606557 LNPKQ9C0E8 428 aa28.06■■■□□ 2.08
SNX5-217ENST00000606557 GOLIM4O00461 696 aa28.05■■■□□ 2.08
SNX5-217ENST00000606557 MX1P20591 662 aa28.05■■■□□ 2.08
SNX5-217ENST00000606557 TTF1Q15361 905 aaPredicted RBP28.05■■■□□ 2.08
SNX5-217ENST00000606557 CHD1LQ86WJ1 897 aa28.05■■■□□ 2.08
SNX5-217ENST00000606557 PAG1Q9NWQ8 432 aa28.05■■■□□ 2.08
SNX5-217ENST00000606557 FOCADQ5VW36 1801 aa28.04■■■□□ 2.08
SNX5-217ENST00000606557 IDH1O75874 414 aaKnown RBP28.04■■■□□ 2.08
SNX5-217ENST00000606557 NEFLP07196 543 aa28.04■■■□□ 2.08
SNX5-217ENST00000606557 EDC3Q96F86 508 aaKnown RBP28.04■■■□□ 2.08
SNX5-217ENST00000606557 CDCA5Q96FF9 252 aa28.04■■■□□ 2.08
SNX5-217ENST00000606557 LDHCP07864 332 aa28.03■■■□□ 2.08
SNX5-217ENST00000606557 NAA16Q6N069 864 aaPredicted RBP28.03■■■□□ 2.08
SNX5-217ENST00000606557 CDC42EP5Q6NZY7 148 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms