RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ERICH6Q7L0X2 663 aa27.41■■□□□ 1.98
SNRNP70-204ENST00000595231 OGFOD1Q8N543 542 aa27.41■■□□□ 1.98
SNRNP70-204ENST00000595231 DOCK2Q92608 1830 aa27.41■■□□□ 1.98
SNRNP70-204ENST00000595231 RRAGCQ9HB90 399 aa27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 LMOD1P29536 600 aaPredicted RBP27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 MMP14P50281 582 aa27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 MECOMQ03112 1051 aa27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 NSUN4Q96CB9 384 aaKnown RBP27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 NMRK2Q9NPI5 230 aa27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 HACL1Q9UJ83 578 aa27.4■■□□□ 1.98
SNRNP70-204ENST00000595231 H7C1D1 291 aa27.39■■□□□ 1.97
SNRNP70-204ENST00000595231 EGFRP00533 1210 aa27.39■■□□□ 1.97
SNRNP70-204ENST00000595231 MRIQ9BWK5 157 aa27.39■■□□□ 1.97
SNRNP70-204ENST00000595231 RAI14Q9P0K7 980 aa27.39■■□□□ 1.97
SNRNP70-204ENST00000595231 IQCA1LA6NCM1 817 aa27.38■■□□□ 1.97
SNRNP70-204ENST00000595231 IDH1O75874 414 aaKnown RBP27.38■■□□□ 1.97
SNRNP70-204ENST00000595231 SAMD7Q7Z3H4 446 aa27.38■■□□□ 1.97
SNRNP70-204ENST00000595231 HDAC9Q9UKV0 1011 aa27.38■■□□□ 1.97
SNRNP70-204ENST00000595231 VEGFAP15692 232 aaPredicted RBP27.37■■□□□ 1.97
SNRNP70-204ENST00000595231 HDLBPQ00341 1268 aaKnown RBP27.37■■□□□ 1.97
SNRNP70-204ENST00000595231 DIXDC1Q155Q3 683 aa27.37■■□□□ 1.97
SNRNP70-204ENST00000595231 MYOZ2Q9NPC6 264 aa27.37■■□□□ 1.97
SNRNP70-204ENST00000595231 SERPINA10Q9UK55 444 aa27.37■■□□□ 1.97
SNRNP70-204ENST00000595231 MAST3O60307 1309 aa27.37■■□□□ 1.97
SNRNP70-204ENST00000595231 IGSF3O75054 1194 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 GSPT1P15170 499 aaKnown RBP27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 RGS3P49796 1198 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 TTC22Q5TAA0 569 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 DZIP1Q86YF9 867 aaKnown RBP27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 KBTBD3Q8NAB2 608 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 TAF1DQ9H5J8 278 aaPredicted RBP27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 ADARB2Q9NS39 739 aaKnown RBP27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 PCDHAC2Q9Y5I4 1007 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 EPHX2P34913 555 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 CRKP46108 304 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 ADAMTSL1Q8N6G6 1762 aa27.36■■□□□ 1.97
SNRNP70-204ENST00000595231 HIRAP54198 1017 aaPredicted RBP27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 MAP3K12Q12852 859 aa27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 TBC1D10BQ4KMP7 808 aaPredicted RBP27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 HHIPL2Q6UWX4 724 aa27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 MTMR14Q8NCE2 650 aa27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 TRPM4Q8TD43 1214 aa27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 MYH2Q9UKX2 1941 aa27.35■■□□□ 1.97
SNRNP70-204ENST00000595231 CFAP100Q494V2 611 aa27.34■■□□□ 1.97
SNRNP70-204ENST00000595231 RBM26Q5T8P6 1007 aaKnown RBP27.34■■□□□ 1.97
SNRNP70-204ENST00000595231 TEKT1Q969V4 418 aa27.34■■□□□ 1.97
SNRNP70-204ENST00000595231 EVI5LQ96CN4 794 aa27.34■■□□□ 1.97
SNRNP70-204ENST00000595231 FAM163AQ96GL9 167 aaPredicted RBP27.34■■□□□ 1.97
SNRNP70-204ENST00000595231 ZBED3Q96IU2 234 aaPredicted RBP27.34■■□□□ 1.97
SNRNP70-204ENST00000595231 GPBP1L1Q9HC44 474 aaPredicted RBP27.33■■□□□ 1.97
SNRNP70-204ENST00000595231 CHGBP05060 677 aa27.33■■□□□ 1.97
SNRNP70-204ENST00000595231 SLC9C2Q5TAH2 1124 aa27.33■■□□□ 1.97
SNRNP70-204ENST00000595231 MAGEB6Q8N7X4 407 aa27.33■■□□□ 1.97
SNRNP70-204ENST00000595231 ZDHHC15Q96MV8 337 aa27.33■■□□□ 1.97
SNRNP70-204ENST00000595231 MAST2Q6P0Q8 1798 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 GAKO14976 1311 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 TRIM6-TRIM34B2RNG4 842 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 WNT10BO00744 389 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 KIF4BQ2VIQ3 1234 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 NAA16Q6N069 864 aaPredicted RBP27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 USP50Q70EL3 339 aaPredicted RBP27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 ADGRA1Q86SQ6 560 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 ZNF784Q8NCA9 323 aaPredicted RBP27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 PRMT6Q96LA8 375 aaPredicted RBP27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 DAGLAQ9Y4D2 1042 aa27.32■■□□□ 1.96
SNRNP70-204ENST00000595231 TCRBV5S4A2TA0A5A2 114 aa27.31■■□□□ 1.96
SNRNP70-204ENST00000595231 PDE6AP16499 860 aa27.31■■□□□ 1.96
SNRNP70-204ENST00000595231 RBM5P52756 815 aaKnown RBP eCLIP27.31■■□□□ 1.96
SNRNP70-204ENST00000595231 DLGAP5Q15398 846 aa27.31■■□□□ 1.96
SNRNP70-204ENST00000595231 APOBEC3HQ6NTF7 200 aaKnown RBP27.31■■□□□ 1.96
SNRNP70-204ENST00000595231 MYH7P12883 1935 aa27.31■■□□□ 1.96
SNRNP70-204ENST00000595231 SPDYE2BA6NHP3 402 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 SPDYE6P0CI01 402 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 ADD2P35612 726 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 GSTO1P78417 241 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 NBPF9Q3BBW0 867 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 SLFNL1Q499Z3 407 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 SLF2Q8IX21 1173 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 CNTROBQ8N137 903 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 RILPL2Q969X0 211 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.3■■□□□ 1.961e-9■■■□□ 15.1
SNRNP70-204ENST00000595231 MROH7-TTC4A0A0A0MT08 1334 aa27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 TMED8Q6PL24 325 aaPredicted RBP27.3■■□□□ 1.96
SNRNP70-204ENST00000595231 LDHCP07864 332 aa27.29■■□□□ 1.96
SNRNP70-204ENST00000595231 SDSP20132 328 aa27.29■■□□□ 1.96
SNRNP70-204ENST00000595231 CYP7A1P22680 504 aa27.29■■□□□ 1.96
SNRNP70-204ENST00000595231 PNMA8AQ86V59 439 aaPredicted RBP27.29■■□□□ 1.96
SNRNP70-204ENST00000595231 FSD1Q9BTV5 496 aa27.29■■□□□ 1.96
SNRNP70-204ENST00000595231 ZNF532Q9HCE3 1301 aa27.28■■□□□ 1.96
SNRNP70-204ENST00000595231 GPR75-ASB3A0A0A6YYF3 556 aa27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 POTEIP0CG38 1075 aa27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 POTEJP0CG39 1038 aa27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 UBE3CQ15386 1083 aa27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 ASTN2O75129 1339 aaPredicted RBP27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 KIF3CO14782 793 aa27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 EAPPQ56P03 285 aaPredicted RBP27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 ZSCAN25Q6NSZ9 544 aa27.27■■□□□ 1.96
SNRNP70-204ENST00000595231 AK9Q5TCS8 1911 aa27.26■■□□□ 1.95
SNRNP70-204ENST00000595231 RNF113AO15541 343 aaKnown RBP27.26■■□□□ 1.95
SNRNP70-204ENST00000595231 BTDP43251 543 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms