RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 CCL15Q16663 113 aa19.39■□□□□ 0.69
FOXA3-202ENST00000594297 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.39■□□□□ 0.69
FOXA3-202ENST00000594297 VAMP4O75379 141 aa19.38■□□□□ 0.69
FOXA3-202ENST00000594297 TNFAIP1Q13829 316 aa19.38■□□□□ 0.69
FOXA3-202ENST00000594297 SLC4A8Q2Y0W8 1093 aa19.38■□□□□ 0.69
FOXA3-202ENST00000594297 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
FOXA3-202ENST00000594297 SPDYE2Q495Y8 402 aa19.38■□□□□ 0.69
FOXA3-202ENST00000594297 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.38■□□□□ 0.69
FOXA3-202ENST00000594297 H0YGN5 161 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 VGLL4Q14135 290 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 NBPF11Q86T75 865 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 FAM43AQ8N2R8 423 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 TEPSINQ96N21 525 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 ZFYVE28Q9HCC9 887 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 ZNF70Q9UC06 446 aaPredicted RBP19.37■□□□□ 0.69
FOXA3-202ENST00000594297 SZT2Q5T011 3432 aa19.37■□□□□ 0.69
FOXA3-202ENST00000594297 FLIIQ13045 1269 aa19.36■□□□□ 0.69
FOXA3-202ENST00000594297 SH3TC2Q8TF17 1288 aa19.36■□□□□ 0.69
FOXA3-202ENST00000594297 ARHGAP39Q9C0H5 1083 aa19.36■□□□□ 0.69
FOXA3-202ENST00000594297 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
FOXA3-202ENST00000594297 GTF2A2P52657 109 aa19.35■□□□□ 0.69
FOXA3-202ENST00000594297 ARHGEF6Q15052 776 aa19.35■□□□□ 0.69
FOXA3-202ENST00000594297 OTUD5Q96G74 571 aa19.35■□□□□ 0.69
FOXA3-202ENST00000594297 TDRD3Q9H7E2 651 aaKnown RBP19.35■□□□□ 0.69
FOXA3-202ENST00000594297 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
FOXA3-202ENST00000594297 RARSP54136 660 aaKnown RBP19.34■□□□□ 0.69
FOXA3-202ENST00000594297 FOXO4P98177 505 aa19.34■□□□□ 0.69
FOXA3-202ENST00000594297 IFIT5Q13325 482 aaKnown RBP19.34■□□□□ 0.69
FOXA3-202ENST00000594297 MFSD14BQ5SR56 506 aa19.34■□□□□ 0.69
FOXA3-202ENST00000594297 LINS1Q8NG48 757 aa19.34■□□□□ 0.69
FOXA3-202ENST00000594297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.34■□□□□ 0.69
FOXA3-202ENST00000594297 DNAAF4Q8WXU2 420 aa19.34■□□□□ 0.69
FOXA3-202ENST00000594297 TMEM39BQ9GZU3 492 aa19.34■□□□□ 0.69
FOXA3-202ENST00000594297 TTF2Q9UNY4 1162 aaKnown RBP19.34■□□□□ 0.69
FOXA3-202ENST00000594297 CHMP3Q9Y3E7 222 aa19.34■□□□□ 0.69
FOXA3-202ENST00000594297 FAM205AQ6ZU69 1335 aa19.33■□□□□ 0.69
FOXA3-202ENST00000594297 TRIOBPQ9H2D6 2365 aa19.33■□□□□ 0.69
FOXA3-202ENST00000594297 TCP10L2B9ZVM9 353 aa19.33■□□□□ 0.68
FOXA3-202ENST00000594297 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.68
FOXA3-202ENST00000594297 FKBP5Q13451 457 aaPredicted RBP19.33■□□□□ 0.68
FOXA3-202ENST00000594297 CHRDL2Q6WN34 429 aa19.33■□□□□ 0.68
FOXA3-202ENST00000594297 SHISA4Q96DD7 197 aa19.33■□□□□ 0.68
FOXA3-202ENST00000594297 SERPINA10Q9UK55 444 aa19.33■□□□□ 0.68
FOXA3-202ENST00000594297 ZNF594Q96JF6 807 aaPredicted RBP19.32■□□□□ 0.68
FOXA3-202ENST00000594297 CSADQ9Y600 493 aa19.32■□□□□ 0.68
FOXA3-202ENST00000594297 CACNA1FO60840 1977 aa19.32■□□□□ 0.68
FOXA3-202ENST00000594297 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
FOXA3-202ENST00000594297 SPDYE5A6NIY4 337 aa19.31■□□□□ 0.68
FOXA3-202ENST00000594297 PLIN1O60240 522 aa19.31■□□□□ 0.68
FOXA3-202ENST00000594297 MS4A1P11836 297 aa19.31■□□□□ 0.68
FOXA3-202ENST00000594297 MAP3K9P80192 1104 aa19.31■□□□□ 0.68
FOXA3-202ENST00000594297 LACTBP83111 547 aaPredicted RBP19.31■□□□□ 0.68
FOXA3-202ENST00000594297 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
FOXA3-202ENST00000594297 CEP290O15078 2479 aa19.3■□□□□ 0.68
FOXA3-202ENST00000594297 TLR2O60603 784 aa19.3■□□□□ 0.68
FOXA3-202ENST00000594297 TDRD7Q8NHU6 1098 aaKnown RBP19.3■□□□□ 0.68
FOXA3-202ENST00000594297 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
FOXA3-202ENST00000594297 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
FOXA3-202ENST00000594297 SNCAIPQ9Y6H5 919 aa19.3■□□□□ 0.68
FOXA3-202ENST00000594297 BTBD19C9JJ37 291 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 ECM2O94769 699 aaPredicted RBP19.29■□□□□ 0.68
FOXA3-202ENST00000594297 NEFLP07196 543 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 CRKP46108 304 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 GYG1P46976 350 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 TNNI2P48788 182 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 KIF22Q14807 665 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 EPHA10Q5JZY3 1008 aa19.29■□□□□ 0.68
FOXA3-202ENST00000594297 MTFR1Q15390 333 aa19.28■□□□□ 0.68
FOXA3-202ENST00000594297 GRIK5Q16478 980 aa19.28■□□□□ 0.68
FOXA3-202ENST00000594297 LMBR1LQ6UX01 489 aa19.28■□□□□ 0.68
FOXA3-202ENST00000594297 LDHAL6AQ6ZMR3 332 aa19.28■□□□□ 0.68
FOXA3-202ENST00000594297 FRAT1Q92837 279 aaPredicted RBP19.28■□□□□ 0.68
FOXA3-202ENST00000594297 CNNM1Q9NRU3 951 aa19.28■□□□□ 0.68
FOXA3-202ENST00000594297 RBM27Q9P2N5 1060 aaKnown RBP19.28■□□□□ 0.68
FOXA3-202ENST00000594297 RANBP2P49792 3224 aaKnown RBP19.28■□□□□ 0.68
FOXA3-202ENST00000594297 BCAR3O75815 825 aa19.27■□□□□ 0.68
FOXA3-202ENST00000594297 CETPP11597 493 aa19.27■□□□□ 0.68
FOXA3-202ENST00000594297 CACNB3P54284 484 aa19.27■□□□□ 0.68
FOXA3-202ENST00000594297 TAF7LQ5H9L4 462 aa19.27■□□□□ 0.68
FOXA3-202ENST00000594297 WRNIP1Q96S55 665 aa19.27■□□□□ 0.68
FOXA3-202ENST00000594297 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
FOXA3-202ENST00000594297 F6X3S4 739 aa19.26■□□□□ 0.67
FOXA3-202ENST00000594297 WDHD1O75717 1129 aaPredicted RBP19.26■□□□□ 0.67
FOXA3-202ENST00000594297 CTGFP29279 349 aa19.26■□□□□ 0.67
FOXA3-202ENST00000594297 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
FOXA3-202ENST00000594297 ERO1BQ86YB8 467 aa19.26■□□□□ 0.67
FOXA3-202ENST00000594297 MRPL50Q8N5N7 158 aaKnown RBP19.26■□□□□ 0.67
FOXA3-202ENST00000594297 IRF6O14896 467 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 GNRH1P01148 92 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 HIBADHP31937 336 aaKnown RBP19.25■□□□□ 0.67
FOXA3-202ENST00000594297 PRMT2P55345 433 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 SNAPC2Q13487 334 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 BEND3Q5T5X7 828 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 ZKSCAN2Q63HK3 967 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 ZKSCAN4Q969J2 545 aaPredicted RBP19.25■□□□□ 0.67
FOXA3-202ENST00000594297 FAM84BQ96KN1 310 aaPredicted RBP19.25■□□□□ 0.67
FOXA3-202ENST00000594297 PTPRCP08575 1304 aa19.25■□□□□ 0.67
FOXA3-202ENST00000594297 RRP1P56182 461 aaKnown RBP19.24■□□□□ 0.67
FOXA3-202ENST00000594297 PPIL2Q13356 520 aa19.24■□□□□ 0.67
FOXA3-202ENST00000594297 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms