RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 GGA3Q9NZ52 723 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 ABT1Q9ULW3 272 aaKnown RBP11.81□□□□□ -0.52
DDX39A-220ENST00000593008 SCAF8Q9UPN6 1271 aaKnown RBP11.81□□□□□ -0.52
DDX39A-220ENST00000593008 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 PCNTO95613 3336 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 CELF2O95319 508 aaKnown RBP11.8□□□□□ -0.52
DDX39A-220ENST00000593008 GSPT1P15170 499 aaKnown RBP11.8□□□□□ -0.52
DDX39A-220ENST00000593008 PDE1AP54750 535 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 TTC39AQ5SRH9 613 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
DDX39A-220ENST00000593008 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 VPS37DQ86XT2 251 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
DDX39A-220ENST00000593008 BOLA2Q9H3K6 86 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 ANTXR1Q9H6X2 564 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 AKAP11Q9UKA4 1901 aa11.8□□□□□ -0.52
DDX39A-220ENST00000593008 ZAP70P43403 619 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 SLFNL1Q499Z3 407 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
DDX39A-220ENST00000593008 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
DDX39A-220ENST00000593008 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-220ENST00000593008 ARID4AP29374 1257 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-220ENST00000593008 GRM1Q13255 1194 aa11.78□□□□□ -0.52
DDX39A-220ENST00000593008 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
DDX39A-220ENST00000593008 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-220ENST00000593008 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
DDX39A-220ENST00000593008 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
DDX39A-220ENST00000593008 PIH1D3Q9NQM4 214 aaKnown RBP11.78□□□□□ -0.52
DDX39A-220ENST00000593008 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-220ENST00000593008 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
DDX39A-220ENST00000593008 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
DDX39A-220ENST00000593008 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
DDX39A-220ENST00000593008 VEGFBP49765 207 aa11.77□□□□□ -0.53
DDX39A-220ENST00000593008 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.53
DDX39A-220ENST00000593008 STAP2Q9UGK3 403 aa11.77□□□□□ -0.53
DDX39A-220ENST00000593008 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
DDX39A-220ENST00000593008 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
DDX39A-220ENST00000593008 GOLIM4O00461 696 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 WNT10BO00744 389 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-220ENST00000593008 ATP5JP18859 108 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 DEFB115Q30KQ5 88 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 CCDC158Q5M9N0 1113 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 TTC22Q5TAA0 569 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 PRAMEF18Q5VWM3 479 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 SPATA5Q8NB90 893 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 PSME4Q14997 1843 aa11.76□□□□□ -0.53
DDX39A-220ENST00000593008 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDX39A-220ENST00000593008 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 CFAP100Q494V2 611 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 ZNF384Q8TF68 577 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 HAUS7Q99871 368 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 TLL2Q9Y6L7 1015 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 AOX1Q06278 1338 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
DDX39A-220ENST00000593008 UQCRFS1P1P0C7P4 283 aa11.74□□□□□ -0.53
DDX39A-220ENST00000593008 PRDX5P30044 214 aa11.74□□□□□ -0.53
DDX39A-220ENST00000593008 FKBP1AP62942 108 aaKnown RBP11.74□□□□□ -0.53
DDX39A-220ENST00000593008 SAPCD2Q86UD0 394 aa11.74□□□□□ -0.53
DDX39A-220ENST00000593008 TTF2Q9UNY4 1162 aaKnown RBP11.74□□□□□ -0.53
DDX39A-220ENST00000593008 CLRN2A0PK11 232 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
DDX39A-220ENST00000593008 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 DOCK2Q92608 1830 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 ZBED3Q96IU2 234 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-220ENST00000593008 ZNF512BQ96KM6 892 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-220ENST00000593008 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-220ENST00000593008 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
DDX39A-220ENST00000593008 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
DDX39A-220ENST00000593008 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
DDX39A-220ENST00000593008 MAST2Q6P0Q8 1798 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 PITPNM2Q9BZ72 1349 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 HSPA1AP0DMV8 641 aaKnown RBP11.72□□□□□ -0.53
DDX39A-220ENST00000593008 HSPA1BP0DMV9 641 aaKnown RBP11.72□□□□□ -0.53
DDX39A-220ENST00000593008 SDSP20132 328 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 MMP14P50281 582 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 HUNKP57058 714 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
DDX39A-220ENST00000593008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX39A-220ENST00000593008 IL25Q9H293 177 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms