RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 TAF5LO75529 589 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 FAM193AP78312 1265 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 TMEM87BQ96K49 555 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 CARD10Q9BWT7 1032 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
RAVER1-204ENST00000592208 RRAGBQ5VZM2 374 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 CPLX3Q8WVH0 158 aa16.65■□□□□ 0.26
RAVER1-204ENST00000592208 KIF4AO95239 1232 aa16.64■□□□□ 0.26
RAVER1-204ENST00000592208 MBD4O95243 580 aa16.64■□□□□ 0.26
RAVER1-204ENST00000592208 UBASH3AP57075 661 aa16.64■□□□□ 0.26
RAVER1-204ENST00000592208 TCIRG1Q13488 830 aa16.64■□□□□ 0.26
RAVER1-204ENST00000592208 SNW1Q13573 536 aaKnown RBP16.64■□□□□ 0.26
RAVER1-204ENST00000592208 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 BBXQ8WY36 941 aaPredicted RBP16.64■□□□□ 0.25
RAVER1-204ENST00000592208 PRDM15P57071 1507 aaPredicted RBP16.64■□□□□ 0.25
RAVER1-204ENST00000592208 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 ABCC3O15438 1527 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 GOLGA6L10A0A0M3HER8 536 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
RAVER1-204ENST00000592208 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 GJA3Q9Y6H8 435 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
RAVER1-204ENST00000592208 CHMLP26374 656 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 CALRP27797 417 aaKnown RBP16.63■□□□□ 0.25
RAVER1-204ENST00000592208 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 DPP8Q6V1X1 898 aaPredicted RBP16.63■□□□□ 0.25
RAVER1-204ENST00000592208 LRRC45Q96CN5 670 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 TMCO5BA8MYB1 307 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 KRT2P35908 639 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 MICALCLQ6ZW33 695 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 TEX11Q8IYF3 940 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 FAM135BQ49AJ0 1406 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
RAVER1-204ENST00000592208 HS2ST1Q7LGA3 356 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
RAVER1-204ENST00000592208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
RAVER1-204ENST00000592208 STK24Q9Y6E0 443 aa16.63■□□□□ 0.25
RAVER1-204ENST00000592208 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
RAVER1-204ENST00000592208 LLPHQ9BRT6 129 aaKnown RBP16.62■□□□□ 0.25
RAVER1-204ENST00000592208 SRRTQ9BXP5 876 aaKnown RBP16.62■□□□□ 0.25
RAVER1-204ENST00000592208 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 TTLL7Q6ZT98 887 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 IMPG2Q9BZV3 1241 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 USP6P35125 1406 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
RAVER1-204ENST00000592208 LOC102724428A0A0B4J2F2 783 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 SIK1P57059 783 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
RAVER1-204ENST00000592208 LARGE2Q8N3Y3 721 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 BICD1Q96G01 975 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 TUBBP07437 444 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 KRT83P78385 493 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 CTNNBL1Q8WYA6 563 aaPredicted RBP16.61■□□□□ 0.25
RAVER1-204ENST00000592208 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 LMOD1P29536 600 aaPredicted RBP16.61■□□□□ 0.25
RAVER1-204ENST00000592208 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 LPIN2Q92539 896 aa16.61■□□□□ 0.25
RAVER1-204ENST00000592208 ASIC1P78348 528 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 WDR66Q8TBY9 1149 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 SELENOOQ9BVL4 669 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 LIG1P18858 919 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 RPS8P62241 208 aaKnown RBP16.6■□□□□ 0.25
RAVER1-204ENST00000592208 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 KDM5CP41229 1560 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
RAVER1-204ENST00000592208 ERBB3P21860 1342 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 FSD2A1L4K1 749 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 STAMBPO95630 424 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 APPBP2Q92624 585 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 HLTFQ14527 1009 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAVER1-204ENST00000592208 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 DTHD1Q6ZMT9 781 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 RTL1A6NKG5 1358 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 GNG11P61952 73 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 APBB1IPQ7Z5R6 666 aaPredicted RBP16.59■□□□□ 0.25
RAVER1-204ENST00000592208 DRC1Q96MC2 740 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 TET3O43151 1660 aa16.59■□□□□ 0.25
RAVER1-204ENST00000592208 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.25
RAVER1-204ENST00000592208 RPL13P26373 211 aaKnown RBP16.58■□□□□ 0.25
RAVER1-204ENST00000592208 IGSF1Q8N6C5 1336 aa16.58■□□□□ 0.25
RAVER1-204ENST00000592208 KDM5AP29375 1690 aaKnown RBP16.58■□□□□ 0.24
RAVER1-204ENST00000592208 TACC1O75410 805 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms