RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	MRI	Q9BWK5	157 aa		21.38	■■□□□ 1.01
MBD1-221	ENST00000589867	GBA2	Q9HCG7	927 aa	Predicted RBP	21.38	■■□□□ 1.01
MBD1-221	ENST00000589867	DENND2A	Q9ULE3	1009 aa		21.38	■■□□□ 1.01
MBD1-221	ENST00000589867	EXOC6B	Q9Y2D4	811 aa		21.38	■■□□□ 1.01
MBD1-221	ENST00000589867	PDS5A	Q29RF7	1337 aa	Known RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	RRP1	P56182	461 aa	Known RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	SPDYE2	Q495Y8	402 aa		21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	APOBEC3H	Q6NTF7	200 aa	Known RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	PI16	Q6UXB8	463 aa		21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	APOBEC3F	Q8IUX4	373 aa	Known RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	DBNDD2	Q9BQY9	259 aa		21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	TDRD3	Q9H7E2	651 aa	Known RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	GNL3L	Q9NVN8	582 aa	Known RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	ZNF70	Q9UC06	446 aa	Predicted RBP	21.37	■■□□□ 1.01
MBD1-221	ENST00000589867	SSC5D	A1L4H1	1573 aa		21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	WDR33	Q9C0J8	1336 aa	Known RBP	21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	ARID4A	P29374	1257 aa	Predicted RBP	21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	RBM5	P52756	815 aa	Known RBP eCLIP	21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	MOB2	Q70IA6	237 aa		21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	EAF2	Q96CJ1	260 aa	Predicted RBP	21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	HHIPL1	Q96JK4	782 aa		21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	ZDHHC15	Q96MV8	337 aa		21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	TLR7	Q9NYK1	1049 aa	Known RBP	21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	HMG20B	Q9P0W2	317 aa		21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	PAPPA2	Q9BXP8	1791 aa		21.36	■■□□□ 1.01
MBD1-221	ENST00000589867	OS9	Q13438	667 aa	Predicted RBP	21.35	■■□□□ 1.01
MBD1-221	ENST00000589867	ZNF384	Q8TF68	577 aa		21.35	■■□□□ 1.01
MBD1-221	ENST00000589867	CAPNS2	Q96L46	248 aa		21.35	■■□□□ 1.01
MBD1-221	ENST00000589867	DEFB129	Q9H1M3	183 aa		21.35	■■□□□ 1.01
MBD1-221	ENST00000589867	DBNL	Q9UJU6	430 aa	Known RBP	21.35	■■□□□ 1.01
MBD1-221	ENST00000589867	MCAM	P43121	646 aa		21.34	■■□□□ 1.01
MBD1-221	ENST00000589867	HUNK	P57058	714 aa		21.34	■■□□□ 1.01
MBD1-221	ENST00000589867	DIXDC1	Q155Q3	683 aa		21.34	■■□□□ 1.01
MBD1-221	ENST00000589867	HHIPL2	Q6UWX4	724 aa		21.34	■■□□□ 1.01
MBD1-221	ENST00000589867	MYH2	Q9UKX2	1941 aa		21.33	■■□□□ 1.01
MBD1-221	ENST00000589867	CDAN1	Q8IWY9	1227 aa		21.33	■■□□□ 1.01
MBD1-221	ENST00000589867	C2orf69	Q8N8R5	385 aa		21.33	■■□□□ 1.01
MBD1-221	ENST00000589867	TEKT1	Q969V4	418 aa		21.33	■■□□□ 1.01
MBD1-221	ENST00000589867	ZIC5	Q96T25	663 aa		21.33	■■□□□ 1.01
MBD1-221	ENST00000589867	DAGLA	Q9Y4D2	1042 aa		21.33	■■□□□ 1.01
MBD1-221	ENST00000589867	FAM155A	B1AL88	458 aa	Predicted RBP	21.32	■■□□□ 1
MBD1-221	ENST00000589867	AOC2	O75106	756 aa		21.32	■■□□□ 1
MBD1-221	ENST00000589867	RASA3	Q14644	834 aa		21.32	■■□□□ 1
MBD1-221	ENST00000589867	TEPSIN	Q96N21	525 aa		21.32	■■□□□ 1
MBD1-221	ENST00000589867	CCDC8	Q9H0W5	538 aa	Predicted RBP	21.32	■■□□□ 1
MBD1-221	ENST00000589867	VEZT	Q9HBM0	779 aa		21.32	■■□□□ 1
MBD1-221	ENST00000589867	FZD1	Q9UP38	647 aa		21.32	■■□□□ 1
MBD1-221	ENST00000589867	MYO5A	Q9Y4I1	1855 aa	Known RBP	21.32	■■□□□ 1
MBD1-221	ENST00000589867	MYO1B	O43795	1136 aa		21.31	■■□□□ 1
MBD1-221	ENST00000589867	LDHB	P07195	334 aa	Known RBP	21.31	■■□□□ 1
MBD1-221	ENST00000589867	CACNB3	P54284	484 aa		21.31	■■□□□ 1
MBD1-221	ENST00000589867	SPATA5	Q8NB90	893 aa		21.31	■■□□□ 1
MBD1-221	ENST00000589867	RHPN1	Q8TCX5	695 aa		21.31	■■□□□ 1
MBD1-221	ENST00000589867	MAST3	O60307	1309 aa		21.3	■■□□□ 1
MBD1-221	ENST00000589867	HSPA1A	P0DMV8	641 aa	Known RBP	21.3	■■□□□ 1
MBD1-221	ENST00000589867	HSPA1B	P0DMV9	641 aa	Known RBP	21.3	■■□□□ 1
MBD1-221	ENST00000589867	NBPF12	Q5TAG4	269 aa	Predicted RBP	21.3	■■□□□ 1
MBD1-221	ENST00000589867	TBC1D9	Q6ZT07	1266 aa		21.3	■■□□□ 1
MBD1-221	ENST00000589867	ZNF512B	Q96KM6	892 aa	Predicted RBP	21.3	■■□□□ 1
MBD1-221	ENST00000589867	CHMP4B	Q9H444	224 aa	Known RBP	21.3	■■□□□ 1
MBD1-221	ENST00000589867	IL1RAPL2	Q9NP60	686 aa		21.3	■■□□□ 1
MBD1-221	ENST00000589867	PPP2R3B	Q9Y5P8	575 aa		21.3	■■□□□ 1
MBD1-221	ENST00000589867	GAK	O14976	1311 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	UBE2Q2L	H0YL09	131 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	FKBP1B	P68106	108 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	GORAB	Q5T7V8	394 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	RGMB	Q6NW40	437 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	ERC1	Q8IUD2	1116 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	PCDHB15	Q9Y5E8	787 aa		21.29	■■□□□ 1
MBD1-221	ENST00000589867	TCP10L2	B9ZVM9	353 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	HMMR	O75330	724 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	UQCRFS1P1	P0C7P4	283 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	ECE1	P42892	770 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	GRM1	Q13255	1194 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	21.28	■■□□□ 1
MBD1-221	ENST00000589867	TMEM39B	Q9GZU3	492 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	SNRK	Q9NRH2	765 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	WBP1L	Q9NX94	342 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	ABCF2	Q9UG63	623 aa		21.28	■■□□□ 1
MBD1-221	ENST00000589867	CDC42EP5	Q6NZY7	148 aa		21.27	■■□□□ 1
MBD1-221	ENST00000589867	ZGPAT	Q8N5A5	531 aa	Known RBP	21.27	■■□□□ 1
MBD1-221	ENST00000589867	FAM163A	Q96GL9	167 aa	Predicted RBP	21.27	■■□□□ 1
MBD1-221	ENST00000589867	CRBN	Q96SW2	442 aa		21.27	■■□□□ 1
MBD1-221	ENST00000589867	CYP2E1	P05181	493 aa	Predicted RBP	21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	MECOM	Q03112	1051 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	PRKG1	Q13976	671 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	MAP3K11	Q16584	847 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	HSP90AB4P	Q58FF6	505 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	TTC39A	Q5SRH9	613 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	LDLRAD1	Q5T700	205 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	FKBP1C	Q5VVH2	108 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	AACS	Q86V21	672 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	RASAL3	Q86YV0	1011 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	KIF1BP	Q96EK5	621 aa		21.26	■□□□□ 0.99
MBD1-221	ENST00000589867	RFX7	Q2KHR2	1363 aa		21.25	■□□□□ 0.99
MBD1-221	ENST00000589867	APBB1	O00213	710 aa		21.25	■□□□□ 0.99
MBD1-221	ENST00000589867	SLC10A3	P09131	477 aa		21.25	■□□□□ 0.99
MBD1-221	ENST00000589867	ZAP70	P43403	619 aa		21.25	■□□□□ 0.99
MBD1-221	ENST00000589867	NFIA	Q12857	509 aa		21.25	■□□□□ 0.99
MBD1-221	ENST00000589867	CCDC158	Q5M9N0	1113 aa		21.25	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms