RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 IGSF3O75054 1194 aa27.27■■□□□ 1.96
ACTN4-210ENST00000588618 PDE6AP16499 860 aa27.27■■□□□ 1.96
ACTN4-210ENST00000588618 CERS5Q8N5B7 392 aa27.27■■□□□ 1.96
ACTN4-210ENST00000588618 MAGEB6Q8N7X4 407 aa27.27■■□□□ 1.96
ACTN4-210ENST00000588618 EIF5BO60841 1220 aaKnown RBP27.27■■□□□ 1.96
ACTN4-210ENST00000588618 RAD17O75943 681 aa27.27■■□□□ 1.96
ACTN4-210ENST00000588618 SUGT1Q9Y2Z0 365 aa27.27■■□□□ 1.96
ACTN4-210ENST00000588618 EIF6P56537 245 aaKnown RBP27.26■■□□□ 1.95
ACTN4-210ENST00000588618 ZMYM1Q5SVZ6 1142 aa27.26■■□□□ 1.95
ACTN4-210ENST00000588618 NAA16Q6N069 864 aaPredicted RBP27.26■■□□□ 1.95
ACTN4-210ENST00000588618 ZNF532Q9HCE3 1301 aa27.25■■□□□ 1.95
ACTN4-210ENST00000588618 SGSM2O43147 1006 aa27.25■■□□□ 1.95
ACTN4-210ENST00000588618 FKBP1AP62942 108 aaKnown RBP27.25■■□□□ 1.95
ACTN4-210ENST00000588618 UBE3CQ15386 1083 aa27.25■■□□□ 1.95
ACTN4-210ENST00000588618 OSBP2Q969R2 916 aa27.25■■□□□ 1.95
ACTN4-210ENST00000588618 DCAF8L1A6NGE4 600 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 DACT2Q5SW24 774 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 TMED8Q6PL24 325 aaPredicted RBP27.24■■□□□ 1.95
ACTN4-210ENST00000588618 ZNF589Q86UQ0 364 aaPredicted RBP27.24■■□□□ 1.95
ACTN4-210ENST00000588618 NSUN4Q96CB9 384 aaKnown RBP27.24■■□□□ 1.95
ACTN4-210ENST00000588618 MYH2Q9UKX2 1941 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 MYO3BQ8WXR4 1341 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 GSTO1P78417 241 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 MECOMQ03112 1051 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 TNIP1Q15025 636 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 CIAPIN1Q6FI81 312 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 ADGRA1Q86SQ6 560 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 SLF2Q8IX21 1173 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 APPBP2Q92624 585 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 RNF181Q9P0P0 153 aa27.24■■□□□ 1.95
ACTN4-210ENST00000588618 ADAMTSL1Q8N6G6 1762 aa27.23■■□□□ 1.95
ACTN4-210ENST00000588618 CCDC129Q6ZRS4 1044 aa27.23■■□□□ 1.95
ACTN4-210ENST00000588618 MAST3O60307 1309 aa27.23■■□□□ 1.95
ACTN4-210ENST00000588618 F8W031 263 aaPredicted RBP27.22■■□□□ 1.95
ACTN4-210ENST00000588618 M0R2C6 588 aa27.22■■□□□ 1.95
ACTN4-210ENST00000588618 PSMD14O00487 310 aa27.22■■□□□ 1.95
ACTN4-210ENST00000588618 CYP7A1P22680 504 aa27.22■■□□□ 1.95
ACTN4-210ENST00000588618 MFAP1P55081 439 aaKnown RBP27.22■■□□□ 1.95
ACTN4-210ENST00000588618 CXCL9Q07325 125 aa27.22■■□□□ 1.95
ACTN4-210ENST00000588618 PUS7LQ9H0K6 701 aaKnown RBP27.22■■□□□ 1.95
ACTN4-210ENST00000588618 HELLSQ9NRZ9 838 aa27.22■■□□□ 1.95
ACTN4-210ENST00000588618 RAD50Q92878 1312 aa27.22■■□□□ 1.95
ACTN4-210ENST00000588618 FZD9O00144 591 aa27.21■■□□□ 1.95
ACTN4-210ENST00000588618 RSBN1LQ6PCB5 846 aaPredicted RBP27.21■■□□□ 1.95
ACTN4-210ENST00000588618 TTF2Q9UNY4 1162 aaKnown RBP27.21■■□□□ 1.95
ACTN4-210ENST00000588618 VIL1P09327 827 aaKnown RBP27.21■■□□□ 1.95
ACTN4-210ENST00000588618 MCMDC2Q4G0Z9 681 aa27.21■■□□□ 1.95
ACTN4-210ENST00000588618 LDHCP07864 332 aa27.2■■□□□ 1.94
ACTN4-210ENST00000588618 KIAA0825Q8IV33 1275 aa27.2■■□□□ 1.94
ACTN4-210ENST00000588618 C9orf131Q5VYM1 1079 aa27.19■■□□□ 1.94
ACTN4-210ENST00000588618 AIDAQ96BJ3 306 aa27.19■■□□□ 1.94
ACTN4-210ENST00000588618 NOL10Q9BSC4 688 aaKnown RBP27.19■■□□□ 1.94
ACTN4-210ENST00000588618 REC8O95072 547 aa27.19■■□□□ 1.94
ACTN4-210ENST00000588618 DIXDC1Q155Q3 683 aa27.19■■□□□ 1.94
ACTN4-210ENST00000588618 KIAA1211Q6ZU35 1233 aa27.19■■□□□ 1.94
ACTN4-210ENST00000588618 TIAM2Q8IVF5 1701 aa27.17■■□□□ 1.94
ACTN4-210ENST00000588618 OGFOD1Q8N543 542 aa27.17■■□□□ 1.94
ACTN4-210ENST00000588618 AGBL3Q8NEM8 1001 aa27.17■■□□□ 1.94
ACTN4-210ENST00000588618 UPF2Q9HAU5 1272 aaKnown RBP27.17■■□□□ 1.94
ACTN4-210ENST00000588618 GJA3Q9Y6H8 435 aa27.17■■□□□ 1.94
ACTN4-210ENST00000588618 LSG1Q9H089 658 aaKnown RBP27.16■■□□□ 1.94
ACTN4-210ENST00000588618 ANO2Q9NQ90 1003 aa27.16■■□□□ 1.94
ACTN4-210ENST00000588618 HDAC9Q9UKV0 1011 aa27.16■■□□□ 1.94
ACTN4-210ENST00000588618 MIGA1Q8NAN2 632 aa27.16■■□□□ 1.94
ACTN4-210ENST00000588618 ZBTB12Q9Y330 459 aaPredicted RBP27.16■■□□□ 1.94
ACTN4-210ENST00000588618 CCDC171Q6TFL3 1326 aa27.16■■□□□ 1.94
ACTN4-210ENST00000588618 GPAA1O43292 621 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 BAG3O95817 575 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 SCNN1DP51172 638 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 PTH1RQ03431 593 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 VPS53Q5VIR6 699 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 TEKT1Q969V4 418 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 MROH7-TTC4A0A0A0MT08 1334 aa27.15■■□□□ 1.94
ACTN4-210ENST00000588618 MAGEB6P1A0A0J9YX57 407 aa27.14■■□□□ 1.94
ACTN4-210ENST00000588618 FOXP2O15409 715 aa27.14■■□□□ 1.94
ACTN4-210ENST00000588618 RPS12P25398 132 aaKnown RBP27.14■■□□□ 1.94
ACTN4-210ENST00000588618 ZNF541Q9H0D2 1346 aa27.13■■□□□ 1.93
ACTN4-210ENST00000588618 RBM5P52756 815 aaKnown RBP eCLIP27.13■■□□□ 1.932e-6■■■□□ 15
ACTN4-210ENST00000588618 GMLQ99445 158 aa27.13■■□□□ 1.93
ACTN4-210ENST00000588618 RIOK1Q9BRS2 568 aaKnown RBP27.13■■□□□ 1.93
ACTN4-210ENST00000588618 USP26Q9BXU7 913 aa27.13■■□□□ 1.93
ACTN4-210ENST00000588618 MBD4O95243 580 aa27.13■■□□□ 1.93
ACTN4-210ENST00000588618 DYNLL1P63167 89 aaKnown RBP27.13■■□□□ 1.93
ACTN4-210ENST00000588618 LCORLQ8N3X6 602 aa27.13■■□□□ 1.93
ACTN4-210ENST00000588618 AATFQ9NY61 560 aaKnown RBP eCLIP27.13■■□□□ 1.93
ACTN4-210ENST00000588618 CDK5RAP2Q96SN8 1893 aa27.13■■□□□ 1.93
ACTN4-210ENST00000588618 USP17L8P0C7I0 530 aa27.12■■□□□ 1.93
ACTN4-210ENST00000588618 HDLBPQ00341 1268 aaKnown RBP27.12■■□□□ 1.93
ACTN4-210ENST00000588618 CERS3Q8IU89 383 aa27.12■■□□□ 1.93
ACTN4-210ENST00000588618 ARMT1Q9H993 441 aa27.12■■□□□ 1.93
ACTN4-210ENST00000588618 HHIPL2Q6UWX4 724 aa27.11■■□□□ 1.93
ACTN4-210ENST00000588618 GPC2Q8N158 579 aa27.11■■□□□ 1.93
ACTN4-210ENST00000588618 FAM163AQ96GL9 167 aaPredicted RBP27.11■■□□□ 1.93
ACTN4-210ENST00000588618 STRBPQ96SI9 672 aaKnown RBP27.11■■□□□ 1.93
ACTN4-210ENST00000588618 MRIQ9BWK5 157 aa27.11■■□□□ 1.93
ACTN4-210ENST00000588618 TSHZ2Q9NRE2 1034 aa27.11■■□□□ 1.93
ACTN4-210ENST00000588618 SERPINA10Q9UK55 444 aa27.11■■□□□ 1.93
ACTN4-210ENST00000588618 GAKO14976 1311 aa27.11■■□□□ 1.93
ACTN4-210ENST00000588618 CRKP46108 304 aa27.1■■□□□ 1.93
ACTN4-210ENST00000588618 ZC3H4Q9UPT8 1303 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms