RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ALDH1L1O75891 902 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
BRCA1-225ENST00000586385 EN2P19622 333 aaPredicted RBP15.07■□□□□ 0
BRCA1-225ENST00000586385 CRKP46108 304 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 SP3Q02447 781 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 VGLL4Q14135 290 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 TAF7LQ5H9L4 462 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
BRCA1-225ENST00000586385 FBXO33Q7Z6M2 555 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.07■□□□□ 0
BRCA1-225ENST00000586385 EFCC1Q9HA90 598 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 MRS2Q9HD23 443 aa15.07■□□□□ 0
BRCA1-225ENST00000586385 TNFAIP1Q13829 316 aa15.06■□□□□ 0
BRCA1-225ENST00000586385 ANKRD44Q8N8A2 993 aa15.06■□□□□ 0
BRCA1-225ENST00000586385 C9orf78Q9NZ63 289 aaPredicted RBP15.06■□□□□ 0
BRCA1-225ENST00000586385 IQSEC3Q9UPP2 1182 aaPredicted RBP15.06■□□□□ 0
BRCA1-225ENST00000586385 UTYO14607 1347 aa15.06■□□□□ 0
BRCA1-225ENST00000586385 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
BRCA1-225ENST00000586385 CACNA1FO60840 1977 aa15.05■□□□□ 0
BRCA1-225ENST00000586385 CACNB3P54284 484 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 MAP3K9P80192 1104 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 RABL6Q3YEC7 729 aaPredicted RBP15.05■□□□□ -0
BRCA1-225ENST00000586385 LRRC24Q50LG9 513 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 OTUD7BQ6GQQ9 843 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 FAM43AQ8N2R8 423 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 VGLL2Q8N8G2 317 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 SRCIN1Q9C0H9 1055 aa15.05■□□□□ -0
BRCA1-225ENST00000586385 CENPFP49454 3210 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 CCL15-CCL14A0A0B4J2E2 113 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 CCL15Q16663 113 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 HABP4Q5JVS0 413 aaKnown RBP15.04■□□□□ -0
BRCA1-225ENST00000586385 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 ZNF333Q96JL9 665 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 PTCH2Q9Y6C5 1203 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 SNCAIPQ9Y6H5 919 aa15.04■□□□□ -0
BRCA1-225ENST00000586385 SPDYE5A6NIY4 337 aa15.03■□□□□ -0
BRCA1-225ENST00000586385 OTUD5Q96G74 571 aa15.03■□□□□ -0
BRCA1-225ENST00000586385 ARHGAP39Q9C0H5 1083 aa15.03■□□□□ -0
BRCA1-225ENST00000586385 BICC1Q9H694 974 aaKnown RBP15.03■□□□□ -0
BRCA1-225ENST00000586385 BRCA2P51587 3418 aa15.03■□□□□ -0
BRCA1-225ENST00000586385 RBBP6Q7Z6E9 1792 aaKnown RBP15.03■□□□□ -0
BRCA1-225ENST00000586385 ARAP2Q8WZ64 1704 aa15.03■□□□□ -0
BRCA1-225ENST00000586385 MROH5Q6ZUA9 1318 aa15.02■□□□□ -0
BRCA1-225ENST00000586385 GTF2A2P52657 109 aa15.02■□□□□ -0
BRCA1-225ENST00000586385 CHAF1AQ13111 956 aaPredicted RBP15.02■□□□□ -0
BRCA1-225ENST00000586385 TAF1CQ15572 869 aaPredicted RBP15.02■□□□□ -0
BRCA1-225ENST00000586385 APOBEC3HQ6NTF7 200 aaKnown RBP15.02■□□□□ -0
BRCA1-225ENST00000586385 KLHDC4Q8TBB5 520 aa15.02■□□□□ -0
BRCA1-225ENST00000586385 BCAMP50895 628 aa15.01□□□□□ -0.01
BRCA1-225ENST00000586385 HDLBPQ00341 1268 aaKnown RBP15.01□□□□□ -0.01
BRCA1-225ENST00000586385 ZKSCAN4Q969J2 545 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-225ENST00000586385 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
BRCA1-225ENST00000586385 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
BRCA1-225ENST00000586385 ZFYVE28Q9HCC9 887 aa15.01□□□□□ -0.01
BRCA1-225ENST00000586385 ZNF521Q96K83 1311 aa15□□□□□ -0.01
BRCA1-225ENST00000586385 BTBD19C9JJ37 291 aa15□□□□□ -0.01
BRCA1-225ENST00000586385 PDE8BO95263 885 aa15□□□□□ -0.01
BRCA1-225ENST00000586385 FGFR2P21802 821 aa15□□□□□ -0.01
BRCA1-225ENST00000586385 CSADQ9Y600 493 aa15□□□□□ -0.01
BRCA1-225ENST00000586385 IRF6O14896 467 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 TLR2O60603 784 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 CTGFP29279 349 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 TNNI2P48788 182 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 METTL24Q5JXM2 366 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 MRPL50Q8N5N7 158 aaKnown RBP14.99□□□□□ -0.01
BRCA1-225ENST00000586385 TEKT1Q969V4 418 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 WRNIP1Q96S55 665 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 MRIQ9BWK5 157 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 ZSWIM8A7E2V4 1837 aa14.99□□□□□ -0.01
BRCA1-225ENST00000586385 RFX5P48382 616 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-225ENST00000586385 FKBP1CQ5VVH2 108 aa14.98□□□□□ -0.01
BRCA1-225ENST00000586385 FAM83AQ86UY5 434 aa14.98□□□□□ -0.01
BRCA1-225ENST00000586385 ERO1BQ86YB8 467 aa14.98□□□□□ -0.01
BRCA1-225ENST00000586385 TBC1D22AQ8WUA7 517 aa14.98□□□□□ -0.01
BRCA1-225ENST00000586385 CETPP11597 493 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 INPP5BP32019 993 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 FXR1P51114 621 aaKnown RBP eCLIP14.97□□□□□ -0.01
BRCA1-225ENST00000586385 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-225ENST00000586385 PPIL2Q13356 520 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 SLC9C1Q4G0N8 1177 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 SH3TC2Q8TF17 1288 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
BRCA1-225ENST00000586385 RPAP1Q9BWH6 1393 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-225ENST00000586385 KIF16BQ96L93 1317 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 ADGRA2Q96PE1 1338 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-225ENST00000586385 MOGSQ13724 837 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 CAVIN4Q5BKX8 364 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 C17orf99Q6UX52 265 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 MIGA2Q7L4E1 593 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 TMEM106CQ9BVX2 250 aa14.96□□□□□ -0.01
BRCA1-225ENST00000586385 ZCCHC17Q9NP64 241 aaKnown RBP14.96□□□□□ -0.01
BRCA1-225ENST00000586385 SNAPC2Q13487 334 aa14.95□□□□□ -0.02
BRCA1-225ENST00000586385 SHISA4Q96DD7 197 aa14.95□□□□□ -0.02
BRCA1-225ENST00000586385 ZNF112Q9UJU3 913 aa14.95□□□□□ -0.02
BRCA1-225ENST00000586385 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-225ENST00000586385 SUGT1Q9Y2Z0 365 aa14.95□□□□□ -0.02
BRCA1-225ENST00000586385 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms