RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 GSDMDP57764 484 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CBX1P83916 185 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PI16Q6UXB8 463 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PRDM11Q9NQV5 511 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 MYH7P12883 1935 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 KIF23Q02241 960 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 SYNE3Q6ZMZ3 975 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 GJB4Q9NTQ9 266 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PRDM4Q9UKN5 801 aa16.5■□□□□ 0.23
CDK5RAP3-237ENST00000585163 IL2RBP14784 551 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 AXDND1Q5T1B0 1012 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ANO1Q5XXA6 986 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 HOMEZQ8IX15 550 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CCDC85AQ96PX6 553 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZNF202O95125 648 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CMA1P23946 247 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.49■□□□□ 0.231e-7■■■□□ 14.8
CDK5RAP3-237ENST00000585163 RIC1Q4ADV7 1423 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 COL5A2P05997 1499 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 C4AP0C0L4 1744 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 C4BP0C0L5 1744 aa16.49■□□□□ 0.23
CDK5RAP3-237ENST00000585163 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 RIPOR2Q9Y4F9 1068 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.236e-7■■■□□ 18.2
CDK5RAP3-237ENST00000585163 MCAMP43121 646 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZNF592Q92610 1267 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 NBPF3Q9H094 633 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
CDK5RAP3-237ENST00000585163 AKAP11Q9UKA4 1901 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 NLRP12P59046 1061 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 FEZ1Q99689 392 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ANGEL1Q9UNK9 670 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZNF330Q9Y3S2 320 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZMYM6O95789 1325 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PFKFB1P16118 471 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ADD2P35612 726 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 TRDNQ13061 729 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZNF512BQ96KM6 892 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ATRNO75882 1429 aa16.46■□□□□ 0.23
CDK5RAP3-237ENST00000585163 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
CDK5RAP3-237ENST00000585163 XPO4Q9C0E2 1151 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-237ENST00000585163 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.22
CDK5RAP3-237ENST00000585163 NCAPHQ15003 741 aa16.46■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TIGD1Q96MW7 591 aa16.46■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 BRD2P25440 801 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 DMTNQ08495 405 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 NAA30Q147X3 362 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SLC9C2Q5TAH2 1124 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 UTP14CQ5TAP6 766 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TRMT1Q9NXH9 659 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 IFNKQ9P0W0 207 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CGNQ9P2M7 1197 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 BIN1O00499 593 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
CDK5RAP3-237ENST00000585163 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CDKL5O76039 1030 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SMC2O95347 1197 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ITGA6P23229 1130 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 METAP2P50579 478 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TPM4P67936 248 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 UBE3CQ15386 1083 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 AIFM3Q96NN9 605 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TOGARAM1Q9Y4F4 1720 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 IKBKBO14920 756 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PPP6R2O75170 966 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 DHX8Q14562 1220 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ARMCX5Q6P1M9 558 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms