RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PI16Q6UXB8 463 aa15.61■□□□□ 0.09
CBX1-206ENST00000581003 ZNF70Q9UC06 446 aaPredicted RBP15.61■□□□□ 0.09
CBX1-206ENST00000581003 SERPINA10Q9UK55 444 aa15.61■□□□□ 0.09
CBX1-206ENST00000581003 HSPA8P11142 646 aaKnown RBP15.6■□□□□ 0.09
CBX1-206ENST00000581003 RASGRF1Q13972 1273 aa15.6■□□□□ 0.09
CBX1-206ENST00000581003 TTLL12Q14166 644 aaPredicted RBP15.6■□□□□ 0.09
CBX1-206ENST00000581003 DIXDC1Q155Q3 683 aa15.6■□□□□ 0.09
CBX1-206ENST00000581003 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
CBX1-206ENST00000581003 RASAL3Q86YV0 1011 aa15.6■□□□□ 0.09
CBX1-206ENST00000581003 XAGE2Q96GT9 111 aa15.6■□□□□ 0.09
CBX1-206ENST00000581003 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.6■□□□□ 0.09
CBX1-206ENST00000581003 COG6Q9Y2V7 657 aa15.6■□□□□ 0.09
CBX1-206ENST00000581003 TCP10L2B9ZVM9 353 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 SLC10A3P09131 477 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 LBX1P52954 281 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 ATP8B2P98198 1209 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 MKRN3Q13064 507 aaKnown RBP15.59■□□□□ 0.09
CBX1-206ENST00000581003 RASA3Q14644 834 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 NBPF12Q5TAG4 269 aaPredicted RBP15.59■□□□□ 0.09
CBX1-206ENST00000581003 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 AIDAQ96BJ3 306 aa15.59■□□□□ 0.09
CBX1-206ENST00000581003 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
CBX1-206ENST00000581003 MMP14P50281 582 aa15.58■□□□□ 0.08
CBX1-206ENST00000581003 KIF23Q02241 960 aaPredicted RBP15.58■□□□□ 0.08
CBX1-206ENST00000581003 APOBEC3HQ6NTF7 200 aaKnown RBP15.58■□□□□ 0.08
CBX1-206ENST00000581003 TBC1D22AQ8WUA7 517 aa15.58■□□□□ 0.08
CBX1-206ENST00000581003 NEUROD6Q96NK8 337 aa15.58■□□□□ 0.08
CBX1-206ENST00000581003 TMEM39BQ9GZU3 492 aa15.58■□□□□ 0.08
CBX1-206ENST00000581003 MYO1BO43795 1136 aa15.57■□□□□ 0.08
CBX1-206ENST00000581003 MAP2K2P36507 400 aa15.57■□□□□ 0.08
CBX1-206ENST00000581003 MAP2K1Q02750 393 aaPredicted RBP15.57■□□□□ 0.08
CBX1-206ENST00000581003 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.08
CBX1-206ENST00000581003 TEKT1Q969V4 418 aa15.57■□□□□ 0.08
CBX1-206ENST00000581003 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
CBX1-206ENST00000581003 TEPSINQ96N21 525 aa15.57■□□□□ 0.08
CBX1-206ENST00000581003 TLR7Q9NYK1 1049 aaKnown RBP15.57■□□□□ 0.08
CBX1-206ENST00000581003 ANGEL1Q9UNK9 670 aaKnown RBP15.57■□□□□ 0.08
CBX1-206ENST00000581003 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
CBX1-206ENST00000581003 CTCFP49711 727 aaPredicted RBP15.56■□□□□ 0.08
CBX1-206ENST00000581003 FKBP1BP68106 108 aa15.56■□□□□ 0.08
CBX1-206ENST00000581003 NOGQ13253 232 aa15.56■□□□□ 0.08
CBX1-206ENST00000581003 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
CBX1-206ENST00000581003 WDR66Q8TBY9 1149 aa15.56■□□□□ 0.08
CBX1-206ENST00000581003 ZDHHC15Q96MV8 337 aa15.56■□□□□ 0.08
CBX1-206ENST00000581003 DAGLAQ9Y4D2 1042 aa15.56■□□□□ 0.08
CBX1-206ENST00000581003 OTOFQ9HC10 1997 aa15.55■□□□□ 0.08
CBX1-206ENST00000581003 OS9Q13438 667 aaPredicted RBP15.55■□□□□ 0.08
CBX1-206ENST00000581003 ZNF384Q8TF68 577 aa15.55■□□□□ 0.08
CBX1-206ENST00000581003 DBNDD2Q9BQY9 259 aa15.55■□□□□ 0.08
CBX1-206ENST00000581003 GNL3LQ9NVN8 582 aaKnown RBP15.55■□□□□ 0.08
CBX1-206ENST00000581003 HMG20BQ9P0W2 317 aa15.55■□□□□ 0.08
CBX1-206ENST00000581003 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
CBX1-206ENST00000581003 NF2P35240 595 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 HDLBPQ00341 1268 aaKnown RBP15.54■□□□□ 0.08
CBX1-206ENST00000581003 TNNI3KQ59H18 835 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 LDLRAD1Q5T700 205 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 SIRT2Q8IXJ6 389 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 CSRNP1Q96S65 589 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 DENND2AQ9ULE3 1009 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 AKAP2Q9Y2D5 859 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 PPP2R3BQ9Y5P8 575 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 FPGT-TNNI3KV9GXZ4 949 aa15.54■□□□□ 0.08
CBX1-206ENST00000581003 SALL1Q9NSC2 1324 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 SEMA3EO15041 775 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 LDHBP07195 334 aaKnown RBP15.53■□□□□ 0.08
CBX1-206ENST00000581003 MCAMP43121 646 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 NFIAQ12857 509 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 CCDC102AQ96A19 550 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 SNRKQ9NRH2 765 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 ABCF2Q9UG63 623 aa15.53■□□□□ 0.08
CBX1-206ENST00000581003 MAST3O60307 1309 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 USP2O75604 605 aaPredicted RBP15.52■□□□□ 0.08
CBX1-206ENST00000581003 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 CDC42EP5Q6NZY7 148 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 HHIPL2Q6UWX4 724 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 TNS4Q8IZW8 715 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 EAF2Q96CJ1 260 aaPredicted RBP15.52■□□□□ 0.08
CBX1-206ENST00000581003 CCDC8Q9H0W5 538 aaPredicted RBP15.52■□□□□ 0.08
CBX1-206ENST00000581003 ZBTB40Q9NUA8 1239 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 DBNLQ9UJU6 430 aaKnown RBP15.52■□□□□ 0.08
CBX1-206ENST00000581003 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.08
CBX1-206ENST00000581003 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
CBX1-206ENST00000581003 APBB1O00213 710 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
CBX1-206ENST00000581003 GJA5P36382 358 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 ARMC9Q7Z3E5 817 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 ZFPM1Q8IX07 1006 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 SPATA5Q8NB90 893 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 BEGAINQ9BUH8 593 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 NDUFB9Q9Y6M9 179 aa15.51■□□□□ 0.07
CBX1-206ENST00000581003 TRPA1O75762 1119 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 SLURP2P0DP57 97 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 MECOMQ03112 1051 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 TCP10Q12799 353 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 MAP3K11Q16584 847 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 IFFO2Q5TF58 517 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms