RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 MAP3K11Q16584 847 aa21.07■□□□□ 0.96
CDC42EP4-204ENST00000579611 LDLRAD1Q5T700 205 aa21.07■□□□□ 0.96
CDC42EP4-204ENST00000579611 MOB2Q70IA6 237 aa21.07■□□□□ 0.96
CDC42EP4-204ENST00000579611 UNCXA6NJT0 531 aa21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 SEMA3EO15041 775 aa21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 TNFAIP1Q13829 316 aa21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 SUPT20HL1Q3ZLR7 823 aa21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 ARMC9Q7Z3E5 817 aa21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 SAGE1Q9NXZ1 904 aa21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 ZNF70Q9UC06 446 aaPredicted RBP21.06■□□□□ 0.96
CDC42EP4-204ENST00000579611 MAST3O60307 1309 aa21.05■□□□□ 0.96
CDC42EP4-204ENST00000579611 TEKT1Q969V4 418 aa21.05■□□□□ 0.96
CDC42EP4-204ENST00000579611 ZDHHC15Q96MV8 337 aa21.05■□□□□ 0.96
CDC42EP4-204ENST00000579611 CSRNP1Q96S65 589 aa21.05■□□□□ 0.96
CDC42EP4-204ENST00000579611 TTLL12Q14166 644 aaPredicted RBP21.04■□□□□ 0.96
CDC42EP4-204ENST00000579611 RASA3Q14644 834 aa21.04■□□□□ 0.96
CDC42EP4-204ENST00000579611 HHIPL2Q6UWX4 724 aa21.04■□□□□ 0.96
CDC42EP4-204ENST00000579611 VEZTQ9HBM0 779 aa21.04■□□□□ 0.96
CDC42EP4-204ENST00000579611 AKAP2Q9Y2D5 859 aa21.04■□□□□ 0.96
CDC42EP4-204ENST00000579611 SALL1Q9NSC2 1324 aa21.04■□□□□ 0.96
CDC42EP4-204ENST00000579611 PPP1R12BO60237 982 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP4-204ENST00000579611 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
CDC42EP4-204ENST00000579611 TDRD3Q9H7E2 651 aaKnown RBP21.03■□□□□ 0.96
CDC42EP4-204ENST00000579611 PDS5AQ29RF7 1337 aaKnown RBP21.03■□□□□ 0.96
CDC42EP4-204ENST00000579611 PNMA6EA0A0J9YXQ4 647 aa21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 ZBTB7BO15156 539 aaPredicted RBP21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 RLBP1P12271 317 aa21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 POLA2Q14181 598 aa21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 FKBP1CQ5VVH2 108 aa21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 CCDC102BQ68D86 513 aa21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 APOBEC3HQ6NTF7 200 aaKnown RBP21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 DENND2AQ9ULE3 1009 aa21.02■□□□□ 0.96
CDC42EP4-204ENST00000579611 SSC5DA1L4H1 1573 aa21.02■□□□□ 0.95
CDC42EP4-204ENST00000579611 ARAP2Q8WZ64 1704 aa21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 PHKA1P46020 1223 aa21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 TIMM10P62072 90 aa21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 TFCP2Q12800 502 aa21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 NBPF12Q5TAG4 269 aaPredicted RBP21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 SSH3Q8TE77 659 aa21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 TEPSINQ96N21 525 aa21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 ANGEL1Q9UNK9 670 aaKnown RBP21.01■□□□□ 0.95
CDC42EP4-204ENST00000579611 A0A1B0GUL7 405 aa21■□□□□ 0.95
CDC42EP4-204ENST00000579611 ADORA1P30542 326 aa21■□□□□ 0.95
CDC42EP4-204ENST00000579611 TNNI2P48788 182 aa21■□□□□ 0.95
CDC42EP4-204ENST00000579611 ATP8B2P98198 1209 aa21■□□□□ 0.95
CDC42EP4-204ENST00000579611 RNF186Q9NXI6 227 aa21■□□□□ 0.95
CDC42EP4-204ENST00000579611 TM4SF4P48230 202 aa20.99■□□□□ 0.95
CDC42EP4-204ENST00000579611 G3BP1Q13283 466 aaKnown RBP eCLIP20.99■□□□□ 0.95
CDC42EP4-204ENST00000579611 MVPQ14764 893 aaKnown RBP20.99■□□□□ 0.95
CDC42EP4-204ENST00000579611 FAM83AQ86UY5 434 aa20.99■□□□□ 0.95
CDC42EP4-204ENST00000579611 XAGE2Q96GT9 111 aa20.99■□□□□ 0.95
CDC42EP4-204ENST00000579611 TSKSQ9UJT2 592 aa20.99■□□□□ 0.95
CDC42EP4-204ENST00000579611 USP2O75604 605 aaPredicted RBP20.98■□□□□ 0.95
CDC42EP4-204ENST00000579611 PRKG1Q13976 671 aa20.98■□□□□ 0.95
CDC42EP4-204ENST00000579611 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
CDC42EP4-204ENST00000579611 ZGPATQ8N5A5 531 aaKnown RBP20.98■□□□□ 0.95
CDC42EP4-204ENST00000579611 ECM29Q5VYK3 1845 aa20.98■□□□□ 0.95
CDC42EP4-204ENST00000579611 MS4A1P11836 297 aa20.97■□□□□ 0.95
CDC42EP4-204ENST00000579611 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
CDC42EP4-204ENST00000579611 SPRYD7Q5W111 196 aa20.97■□□□□ 0.95
CDC42EP4-204ENST00000579611 GPR108Q9NPR9 543 aa20.97■□□□□ 0.95
CDC42EP4-204ENST00000579611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.97■□□□□ 0.95
CDC42EP4-204ENST00000579611 TCP10L2B9ZVM9 353 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 LDHBP07195 334 aaKnown RBP20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 PRDX5P30044 214 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 RASGRF1Q13972 1273 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 SLC10A4Q96EP9 437 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 TMEM39BQ9GZU3 492 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 TMOD2Q9NZR1 351 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 FZD1Q9UP38 647 aa20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 NOP58Q9Y2X3 529 aaKnown RBP20.96■□□□□ 0.95
CDC42EP4-204ENST00000579611 TRPA1O75762 1119 aa20.95■□□□□ 0.94
CDC42EP4-204ENST00000579611 ZBTB48P10074 688 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP4-204ENST00000579611 ANKRD13AQ8IZ07 590 aa20.95■□□□□ 0.94
CDC42EP4-204ENST00000579611 DAGLAQ9Y4D2 1042 aa20.95■□□□□ 0.94
CDC42EP4-204ENST00000579611 INHBEP58166 350 aa20.94■□□□□ 0.94
CDC42EP4-204ENST00000579611 SREBF2Q12772 1141 aa20.94■□□□□ 0.94
CDC42EP4-204ENST00000579611 CDAN1Q8IWY9 1227 aa20.94■□□□□ 0.94
CDC42EP4-204ENST00000579611 FAM163AQ96GL9 167 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP4-204ENST00000579611 DIXDC1Q155Q3 683 aa20.93■□□□□ 0.94
CDC42EP4-204ENST00000579611 HOOK2Q96ED9 719 aa20.93■□□□□ 0.94
CDC42EP4-204ENST00000579611 CLMNQ96JQ2 1002 aa20.93■□□□□ 0.94
CDC42EP4-204ENST00000579611 NEUROD6Q96NK8 337 aa20.93■□□□□ 0.94
CDC42EP4-204ENST00000579611 CFHR5Q9BXR6 569 aa20.93■□□□□ 0.94
CDC42EP4-204ENST00000579611 RPAP1Q9BWH6 1393 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-204ENST00000579611 ARID4AP29374 1257 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 CACNB3P54284 484 aa20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 NOM1Q5C9Z4 860 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 SPTY2D1Q68D10 685 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 CDC42EP5Q6NZY7 148 aa20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 PANK1Q8TE04 598 aa20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 WNK4Q96J92 1243 aa20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 C1orf115Q9H7X2 142 aa20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 GAKO14976 1311 aa20.92■□□□□ 0.94
CDC42EP4-204ENST00000579611 MANSC4A6NHS7 340 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-204ENST00000579611 SURF6O75683 361 aaKnown RBP20.91■□□□□ 0.94
CDC42EP4-204ENST00000579611 CEP85Q6P2H3 762 aa20.91■□□□□ 0.94
CDC42EP4-204ENST00000579611 FAM151AQ8WW52 585 aa20.91■□□□□ 0.94
CDC42EP4-204ENST00000579611 HMG20BQ9P0W2 317 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms