RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 SPRYD7Q5W111 196 aa21.85■■□□□ 1.09
SLC9A3R1-203ENST00000578958 LRRFIP2Q9Y608 721 aaKnown RBP21.85■■□□□ 1.09
SLC9A3R1-203ENST00000578958 ECM29Q5VYK3 1845 aa21.85■■□□□ 1.09
SLC9A3R1-203ENST00000578958 MAST3O60307 1309 aa21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 TCP10L2B9ZVM9 353 aa21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 IPO8O15397 1037 aaKnown RBP21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 HDLBPQ00341 1268 aaKnown RBP21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 MAP3K11Q16584 847 aa21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 TMOD2Q9NZR1 351 aa21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 FBXO3Q9UK99 471 aa21.84■■□□□ 1.09
SLC9A3R1-203ENST00000578958 AOX1Q06278 1338 aa21.83■■□□□ 1.09
SLC9A3R1-203ENST00000578958 UNCXA6NJT0 531 aa21.83■■□□□ 1.09
SLC9A3R1-203ENST00000578958 FGFR2P21802 821 aa21.83■■□□□ 1.09
SLC9A3R1-203ENST00000578958 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.09
SLC9A3R1-203ENST00000578958 GNL3LQ9NVN8 582 aaKnown RBP21.83■■□□□ 1.09
SLC9A3R1-203ENST00000578958 SUGT1Q9Y2Z0 365 aa21.83■■□□□ 1.09
SLC9A3R1-203ENST00000578958 MANSC4A6NHS7 340 aaPredicted RBP21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 CIAO1O76071 339 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 GNAI3P08754 354 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 INHBEP58166 350 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 GRIK5Q16478 980 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ATP2B3Q16720 1220 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 CTU1Q7Z7A3 348 aaKnown RBP21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ANKRD13AQ8IZ07 590 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 WDR66Q8TBY9 1149 aa21.82■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ALDH1A1P00352 501 aa21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ZBTB48P10074 688 aaPredicted RBP21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 IL15P40933 162 aaPredicted RBP21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ATG9AQ7Z3C6 839 aa21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 FRAT1Q92837 279 aaPredicted RBP21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 CLMNQ96JQ2 1002 aa21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 MEIS3Q99687 375 aa21.81■■□□□ 1.08
SLC9A3R1-203ENST00000578958 USP2O75604 605 aaPredicted RBP21.8■■□□□ 1.08
SLC9A3R1-203ENST00000578958 WNK4Q96J92 1243 aa21.8■■□□□ 1.08
SLC9A3R1-203ENST00000578958 SSC5DA1L4H1 1573 aa21.79■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ZNF296Q8WUU4 475 aaPredicted RBP21.79■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ZDHHC15Q96MV8 337 aa21.79■■□□□ 1.08
SLC9A3R1-203ENST00000578958 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
SLC9A3R1-203ENST00000578958 TMEM39BQ9GZU3 492 aa21.79■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ARAP2Q8WZ64 1704 aa21.79■■□□□ 1.08
SLC9A3R1-203ENST00000578958 INTS3Q68E01 1043 aaKnown RBP21.78■■□□□ 1.08
SLC9A3R1-203ENST00000578958 OTUD7BQ6GQQ9 843 aa21.78■■□□□ 1.08
SLC9A3R1-203ENST00000578958 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
SLC9A3R1-203ENST00000578958 GPR25O00155 361 aa21.77■■□□□ 1.08
SLC9A3R1-203ENST00000578958 SRGAP3O43295 1099 aa21.77■■□□□ 1.08
SLC9A3R1-203ENST00000578958 CACNB3P54284 484 aa21.77■■□□□ 1.08
SLC9A3R1-203ENST00000578958 HOOK2Q96ED9 719 aa21.77■■□□□ 1.08
SLC9A3R1-203ENST00000578958 ELP3Q9H9T3 547 aa21.77■■□□□ 1.08
SLC9A3R1-203ENST00000578958 COPRSQ9NQ92 184 aa21.77■■□□□ 1.08
SLC9A3R1-203ENST00000578958 FKTNO75072 461 aa21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 MLLT1Q03111 559 aaPredicted RBP21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 PKN2Q16513 984 aaKnown RBP21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 HHIPL2Q6UWX4 724 aa21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 IFNL1Q8IU54 200 aa21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 DENND2AQ9ULE3 1009 aa21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 CSADQ9Y600 493 aa21.76■■□□□ 1.07
SLC9A3R1-203ENST00000578958 LDHBP07195 334 aaKnown RBP21.75■■□□□ 1.07
SLC9A3R1-203ENST00000578958 DIEXFQ68CQ4 756 aaKnown RBP21.75■■□□□ 1.07
SLC9A3R1-203ENST00000578958 ATF7IPQ6VMQ6 1270 aa21.75■■□□□ 1.07
SLC9A3R1-203ENST00000578958 OPTNQ96CV9 577 aa21.75■■□□□ 1.07
SLC9A3R1-203ENST00000578958 TEPSINQ96N21 525 aa21.75■■□□□ 1.07
SLC9A3R1-203ENST00000578958 SEMA3EO15041 775 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 BCAR3O75815 825 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 TRIM27P14373 513 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 MAP3K9P80192 1104 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 NOM1Q5C9Z4 860 aaKnown RBP21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 FAM83AQ86UY5 434 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 CLUAP1Q96AJ1 413 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 AKAP2Q9Y2D5 859 aa21.74■■□□□ 1.07
SLC9A3R1-203ENST00000578958 GNAI2P04899 355 aa21.73■■□□□ 1.07
SLC9A3R1-203ENST00000578958 FKBP1CQ5VVH2 108 aa21.73■■□□□ 1.07
SLC9A3R1-203ENST00000578958 CDAN1Q8IWY9 1227 aa21.73■■□□□ 1.07
SLC9A3R1-203ENST00000578958 MIER1Q8N108 512 aa21.73■■□□□ 1.07
SLC9A3R1-203ENST00000578958 ZGPATQ8N5A5 531 aaKnown RBP21.73■■□□□ 1.07
SLC9A3R1-203ENST00000578958 CFHR5Q9BXR6 569 aa21.73■■□□□ 1.07
SLC9A3R1-203ENST00000578958 PHKA1P46020 1223 aa21.72■■□□□ 1.07
SLC9A3R1-203ENST00000578958 DCAF15Q66K64 600 aa21.72■■□□□ 1.07
SLC9A3R1-203ENST00000578958 VGLL4Q14135 290 aa21.71■■□□□ 1.07
SLC9A3R1-203ENST00000578958 ZKSCAN2Q63HK3 967 aa21.71■■□□□ 1.07
SLC9A3R1-203ENST00000578958 CCDC102BQ68D86 513 aa21.71■■□□□ 1.07
SLC9A3R1-203ENST00000578958 MYH13Q9UKX3 1938 aa21.7■■□□□ 1.07
SLC9A3R1-203ENST00000578958 IGF2BP3O00425 579 aaKnown RBP eCLIP21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 PRDX5P30044 214 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 ADORA1P30542 326 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 GJA5P36382 358 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 RGS19P49795 217 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 TIMM10P62072 90 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 DIXDC1Q155Q3 683 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 GORABQ5T7V8 394 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 NEUROD6Q96NK8 337 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 WRNIP1Q96S55 665 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 R3HDMLQ9H3Y0 253 aa21.7■■□□□ 1.06
SLC9A3R1-203ENST00000578958 GTF2A2P52657 109 aa21.69■■□□□ 1.06
SLC9A3R1-203ENST00000578958 TFCP2Q12800 502 aa21.69■■□□□ 1.06
SLC9A3R1-203ENST00000578958 G3BP1Q13283 466 aaKnown RBP eCLIP21.69■■□□□ 1.067e-9■■□□□ 12.6
SLC9A3R1-203ENST00000578958 MTX1Q13505 466 aa21.69■■□□□ 1.06
SLC9A3R1-203ENST00000578958 MVPQ14764 893 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms