RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CELF1Q92879 486 aaKnown RBP9.85□□□□□ -0.83
COPS3-215ENST00000578317 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 PUS3Q9BZE2 481 aaKnown RBP9.85□□□□□ -0.83
COPS3-215ENST00000578317 SIL1Q9H173 461 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 TMEM134Q9H6X4 195 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 CNNM1Q9NRU3 951 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 CEP126Q9P2H0 1117 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 LIMD1Q9UGP4 676 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 MROH5Q6ZUA9 1318 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 NRXN2Q9P2S2 1712 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 CD46P15529 392 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 PPP2R2DQ66LE6 453 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 CLASRPQ8N2M8 674 aaKnown RBP9.85□□□□□ -0.83
COPS3-215ENST00000578317 AFDNP55196 1824 aaKnown RBP9.84□□□□□ -0.83
COPS3-215ENST00000578317 C10orf71Q711Q0 1435 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 HRO43593 1189 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 PDE8BO95263 885 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 C2CD5Q86YS7 1000 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 VGLL2Q8N8G2 317 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 LNPKQ9C0E8 428 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 ANKRD2Q9GZV1 360 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 MINPP1Q9UNW1 487 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
COPS3-215ENST00000578317 KCNA3P22001 575 aa9.83□□□□□ -0.84
COPS3-215ENST00000578317 TFCP2Q12800 502 aa9.83□□□□□ -0.84
COPS3-215ENST00000578317 SP8Q8IXZ3 490 aa9.83□□□□□ -0.84
COPS3-215ENST00000578317 CNKSR1Q969H4 720 aa9.83□□□□□ -0.84
COPS3-215ENST00000578317 OSBPL3Q9H4L5 887 aa9.83□□□□□ -0.84
COPS3-215ENST00000578317 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
COPS3-215ENST00000578317 SMARCA5O60264 1052 aaPredicted RBP9.82□□□□□ -0.84
COPS3-215ENST00000578317 FGFR2P21802 821 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 CHRNDQ07001 517 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 TNNI3KQ59H18 835 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 METTL24Q5JXM2 366 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 EAF2Q96CJ1 260 aaPredicted RBP9.82□□□□□ -0.84
COPS3-215ENST00000578317 IL1RAPL2Q9NP60 686 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 STAP2Q9UGK3 403 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 ATP6V0A2Q9Y487 856 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.82□□□□□ -0.84
COPS3-215ENST00000578317 FPGT-TNNI3KV9GXZ4 949 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 SPTLC1O15269 473 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 UBE4AQ14139 1066 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 GRIPAP1Q4V328 841 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 C16orf71Q8IYS4 520 aaPredicted RBP9.82□□□□□ -0.84
COPS3-215ENST00000578317 C7orf43Q8WVR3 580 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 LPIN2Q92539 896 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 ZNF622Q969S3 477 aaKnown RBP eCLIP9.82□□□□□ -0.84
COPS3-215ENST00000578317 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
COPS3-215ENST00000578317 SERPINA10Q9UK55 444 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 LEMD3Q9Y2U8 911 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
COPS3-215ENST00000578317 DDX60Q8IY21 1712 aaKnown RBP9.81□□□□□ -0.84
COPS3-215ENST00000578317 IFIT2P09913 472 aaKnown RBP9.81□□□□□ -0.84
COPS3-215ENST00000578317 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
COPS3-215ENST00000578317 CHRNA5P30532 468 aa9.81□□□□□ -0.84
COPS3-215ENST00000578317 TIMM10P62072 90 aa9.81□□□□□ -0.84
COPS3-215ENST00000578317 PUM3Q15397 648 aaKnown RBP9.81□□□□□ -0.84
COPS3-215ENST00000578317 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
COPS3-215ENST00000578317 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
COPS3-215ENST00000578317 UTRNP46939 3433 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 TTC41PQ6P2S7 1318 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 A0A0G2JLW4 131 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 A0A1B0GUL7 405 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
COPS3-215ENST00000578317 DPEP1P16444 411 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 PDE1AP54750 535 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
COPS3-215ENST00000578317 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 AACSQ86V21 672 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 TMX4Q9H1E5 349 aaPredicted RBP9.8□□□□□ -0.84
COPS3-215ENST00000578317 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 LAMB2P55268 1798 aa9.8□□□□□ -0.84
COPS3-215ENST00000578317 LRP5O75197 1615 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 XDHP47989 1333 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 AOX1Q06278 1338 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 MX1P20591 662 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 GJA5P36382 358 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 PRPF40BQ6NWY9 871 aaKnown RBP9.79□□□□□ -0.84
COPS3-215ENST00000578317 C15orf52Q6ZUT6 534 aaKnown RBP9.79□□□□□ -0.84
COPS3-215ENST00000578317 ZNF512BQ96KM6 892 aaPredicted RBP9.79□□□□□ -0.84
COPS3-215ENST00000578317 ECHDC1Q9NTX5 307 aa9.79□□□□□ -0.84
COPS3-215ENST00000578317 DBNLQ9UJU6 430 aaKnown RBP9.79□□□□□ -0.84
COPS3-215ENST00000578317 POTEMA6NI47 508 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 TAF5LO75529 589 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 SLC5A1P13866 664 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 SWT1Q5T5J6 900 aaKnown RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 HELBQ8NG08 1087 aaPredicted RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 OTUD7AQ8TE49 926 aaPredicted RBP9.78□□□□□ -0.84
COPS3-215ENST00000578317 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
COPS3-215ENST00000578317 GPATCH3Q96I76 525 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 359 ms