RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 IQSEC3Q9UPP2 1182 aaPredicted RBP17.74■□□□□ 0.43
ABR-223ENST00000573895 MAST3O60307 1309 aa17.73■□□□□ 0.43
ABR-223ENST00000573895 NF2P35240 595 aa17.73■□□□□ 0.43
ABR-223ENST00000573895 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
ABR-223ENST00000573895 RGMBQ6NW40 437 aa17.73■□□□□ 0.43
ABR-223ENST00000573895 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
ABR-223ENST00000573895 RBM5P52756 815 aaKnown RBP eCLIP17.72■□□□□ 0.43
ABR-223ENST00000573895 NOGQ13253 232 aa17.72■□□□□ 0.43
ABR-223ENST00000573895 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.43
ABR-223ENST00000573895 DEFB129Q9H1M3 183 aa17.72■□□□□ 0.43
ABR-223ENST00000573895 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
ABR-223ENST00000573895 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
ABR-223ENST00000573895 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
ABR-223ENST00000573895 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 CRKP46108 304 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 TFCP2Q12800 502 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 RPAP2Q8IXW5 612 aaPredicted RBP17.71■□□□□ 0.43
ABR-223ENST00000573895 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 PCDHAC2Q9Y5I4 1007 aa17.71■□□□□ 0.43
ABR-223ENST00000573895 TIMM10P62072 90 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 GRIK5Q16478 980 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 CCDC102BQ68D86 513 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 HHIPL2Q6UWX4 724 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 TEKT1Q969V4 418 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
ABR-223ENST00000573895 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
ABR-223ENST00000573895 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
ABR-223ENST00000573895 AOC2O75106 756 aa17.69■□□□□ 0.42
ABR-223ENST00000573895 PHKA1P46020 1223 aa17.69■□□□□ 0.42
ABR-223ENST00000573895 PRAMEF18Q5VWM3 479 aa17.69■□□□□ 0.42
ABR-223ENST00000573895 ZGPATQ8N5A5 531 aaKnown RBP17.69■□□□□ 0.42
ABR-223ENST00000573895 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
ABR-223ENST00000573895 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
ABR-223ENST00000573895 RWDD1Q9H446 243 aaPredicted RBP17.69■□□□□ 0.42
ABR-223ENST00000573895 ZNF70Q9UC06 446 aaPredicted RBP17.69■□□□□ 0.42
ABR-223ENST00000573895 CLRN2A0PK11 232 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 FAM155AB1AL88 458 aaPredicted RBP17.68■□□□□ 0.42
ABR-223ENST00000573895 FOXN1O15353 648 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 ADORA1P30542 326 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 CTCFP49711 727 aaPredicted RBP17.68■□□□□ 0.42
ABR-223ENST00000573895 ZNF157P51786 506 aaPredicted RBP17.68■□□□□ 0.42
ABR-223ENST00000573895 GRM1Q13255 1194 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 BEGAINQ9BUH8 593 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
ABR-223ENST00000573895 UNCXA6NJT0 531 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 CA12O43570 354 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 SLC10A3P09131 477 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
ABR-223ENST00000573895 FKBP1CQ5VVH2 108 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
ABR-223ENST00000573895 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
ABR-223ENST00000573895 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 AOX1Q06278 1338 aa17.67■□□□□ 0.42
ABR-223ENST00000573895 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 SURF6O75683 361 aaKnown RBP17.66■□□□□ 0.42
ABR-223ENST00000573895 TNNI2P48788 182 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 MAP3K11Q16584 847 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 NEUROD6Q96NK8 337 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 PRDM10Q9NQV6 1147 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
ABR-223ENST00000573895 MYH2Q9UKX2 1941 aa17.66■□□□□ 0.42
ABR-223ENST00000573895 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
ABR-223ENST00000573895 HMMRO75330 724 aa17.65■□□□□ 0.42
ABR-223ENST00000573895 LDHBP07195 334 aaKnown RBP17.65■□□□□ 0.42
ABR-223ENST00000573895 RASGRF1Q13972 1273 aa17.65■□□□□ 0.42
ABR-223ENST00000573895 TTLL12Q14166 644 aaPredicted RBP17.65■□□□□ 0.42
ABR-223ENST00000573895 RASA3Q14644 834 aa17.65■□□□□ 0.42
ABR-223ENST00000573895 LDLRAD1Q5T700 205 aa17.65■□□□□ 0.42
ABR-223ENST00000573895 APOBEC3HQ6NTF7 200 aaKnown RBP17.65■□□□□ 0.42
ABR-223ENST00000573895 UBE2Q2LH0YL09 131 aa17.64■□□□□ 0.41
ABR-223ENST00000573895 ARID4AP29374 1257 aaPredicted RBP17.64■□□□□ 0.41
ABR-223ENST00000573895 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
ABR-223ENST00000573895 SPTY2D1Q68D10 685 aaPredicted RBP17.64■□□□□ 0.41
ABR-223ENST00000573895 MOB2Q70IA6 237 aa17.64■□□□□ 0.41
ABR-223ENST00000573895 FAM83AQ86UY5 434 aa17.64■□□□□ 0.41
ABR-223ENST00000573895 RASAL3Q86YV0 1011 aa17.64■□□□□ 0.41
ABR-223ENST00000573895 SSC5DA1L4H1 1573 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 UQCRFS1P1P0C7P4 283 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 PRDX5P30044 214 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 TNNI3KQ59H18 835 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 COL13A1Q5TAT6 717 aaPredicted RBP17.63■□□□□ 0.41
ABR-223ENST00000573895 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 FPGT-TNNI3KV9GXZ4 949 aa17.63■□□□□ 0.41
ABR-223ENST00000573895 HSPA8P11142 646 aaKnown RBP17.62■□□□□ 0.41
ABR-223ENST00000573895 KIF23Q02241 960 aaPredicted RBP17.62■□□□□ 0.41
ABR-223ENST00000573895 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
ABR-223ENST00000573895 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
ABR-223ENST00000573895 CENPQQ7L2Z9 268 aaPredicted RBP17.62■□□□□ 0.41
ABR-223ENST00000573895 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
ABR-223ENST00000573895 SLF2Q8IX21 1173 aa17.62■□□□□ 0.41
ABR-223ENST00000573895 FAM163AQ96GL9 167 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms