RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 FZD1Q9UP38 647 aa15.52■□□□□ 0.08
SCAMP2-212ENST00000569904 MANSC4A6NHS7 340 aaPredicted RBP15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 USP2O75604 605 aaPredicted RBP15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 ALDH1A1P00352 501 aa15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 GRIK5Q16478 980 aa15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 PKN2Q16513 984 aaKnown RBP15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 ATG9AQ7Z3C6 839 aa15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 ZNF296Q8WUU4 475 aaPredicted RBP15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 LPIN2Q92539 896 aa15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 WNK4Q96J92 1243 aa15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 TDRD3Q9H7E2 651 aaKnown RBP15.51■□□□□ 0.07
SCAMP2-212ENST00000569904 GPR25O00155 361 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 CIAO1O76071 339 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 IFIT1P09914 478 aaKnown RBP15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 IREB2P48200 963 aaKnown RBP15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 BCAMP50895 628 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 ANKRD13AQ8IZ07 590 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 ARHGAP45Q92619 1136 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 SLC10A4Q96EP9 437 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 CLMNQ96JQ2 1002 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 ZDHHC15Q96MV8 337 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 API5Q9BZZ5 524 aaKnown RBP15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 NOB1Q9ULX3 412 aaKnown RBP15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 HTTP42858 3142 aa15.5■□□□□ 0.07
SCAMP2-212ENST00000569904 MAST3O60307 1309 aa15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 TESPA1A2RU30 521 aaPredicted RBP15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 UBTFL1P0CB47 393 aaPredicted RBP15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 FKBP1CQ5VVH2 108 aa15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 TEKT1Q969V4 418 aa15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 IQSEC3Q9UPP2 1182 aaPredicted RBP15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
SCAMP2-212ENST00000569904 SLC5A1P13866 664 aa15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 TNNI2P48788 182 aa15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 HHIPL2Q6UWX4 724 aa15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 FAM83AQ86UY5 434 aa15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 IFNL1Q8IU54 200 aa15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 RPAP1Q9BWH6 1393 aaPredicted RBP15.48■□□□□ 0.07
SCAMP2-212ENST00000569904 IGF2BP3O00425 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 FRAT2O75474 233 aaPredicted RBP15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 GJA5P36382 358 aa15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 CENPFP49454 3210 aa15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 CHAF1AQ13111 956 aaPredicted RBP15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 INTS3Q68E01 1043 aaKnown RBP15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 APOBEC3HQ6NTF7 200 aaKnown RBP15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 R3HDMLQ9H3Y0 253 aa15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 COPRSQ9NQ92 184 aa15.47■□□□□ 0.07
SCAMP2-212ENST00000569904 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.46■□□□□ 0.07
SCAMP2-212ENST00000569904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
SCAMP2-212ENST00000569904 WDR66Q8TBY9 1149 aa15.46■□□□□ 0.07
SCAMP2-212ENST00000569904 TMEM39BQ9GZU3 492 aa15.46■□□□□ 0.07
SCAMP2-212ENST00000569904 SALL1Q9NSC2 1324 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 MYH2Q9UKX2 1941 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 TCP10L2B9ZVM9 353 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 FKTNO75072 461 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 IL15P40933 162 aaPredicted RBP15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 MTX1Q13505 466 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 MEIS3Q99687 375 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 HPS5Q9UPZ3 1129 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 LRRFIP2Q9Y608 721 aaKnown RBP15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 BRCA2P51587 3418 aa15.45■□□□□ 0.06
SCAMP2-212ENST00000569904 RBBP6Q7Z6E9 1792 aaKnown RBP15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 SEMA3EO15041 775 aa15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 OPTNQ96CV9 577 aa15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 MS4A4AQ96JQ5 239 aa15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
SCAMP2-212ENST00000569904 GNAI3P08754 354 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 VGLL4Q14135 290 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 OTUD7BQ6GQQ9 843 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 HOOK2Q96ED9 719 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 PTPN18Q99952 460 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 SIL1Q9H173 461 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 PDS5AQ29RF7 1337 aaKnown RBP15.43■□□□□ 0.06
SCAMP2-212ENST00000569904 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
SCAMP2-212ENST00000569904 ELP3Q9H9T3 547 aa15.42■□□□□ 0.06
SCAMP2-212ENST00000569904 TMOD2Q9NZR1 351 aa15.42■□□□□ 0.06
SCAMP2-212ENST00000569904 SPDYE5A6NIY4 337 aa15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 PRDX5P30044 214 aa15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 CACNB3P54284 484 aa15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 FAM151AQ8WW52 585 aa15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 DENND2AQ9ULE3 1009 aa15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 PA2G4Q9UQ80 394 aaKnown RBP15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
SCAMP2-212ENST00000569904 TRIM27P14373 513 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 PHKA1P46020 1223 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 GTF2A2P52657 109 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 CRHR2Q13324 411 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 DAGLAQ9Y4D2 1042 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 CSADQ9Y600 493 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
SCAMP2-212ENST00000569904 RFX7Q2KHR2 1363 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 989 ms